FFCP PHASE1:Mm9::chr8:84578004..84578010,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:84578004..84578010,+|id=chr8:84578004..84578010,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.54e-29,3;CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000624,4.89e-12,8;CL:0000791,8.07e-11,9;CL:0000789,8.07e-11,9;CL:0002420,8.07e-11,9;CL:0002419,8.07e-11,9;CL:0000790,8.07e-11,9;CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001948!4.61e-07!5;UBERON:0002315!4.61e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.54e-29,3;UBERON:0001948,3.19e-18,5;UBERON:0002315,3.19e-18,5;UBERON:0002240,2.21e-15,6;UBERON:0005174,2.21e-15,6;UBERON:0001137,2.21e-15,6;UBERON:0003076,3.15e-08,12;UBERON:0003057,3.15e-08,12|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,0,0.234064526321993,0,0.319088635981346,0.513602189793617,1.74840804837995,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0.56276261003168,0,1.47314292736834,1.42371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr8:84578004..84578010,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:84578004..84578010,+ | |||
|description=CAGE_peak_at_chr8:84578004..84578010,+ | |||
|id=chr8:84578004..84578010,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.54e-29,3;CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000624,4.89e-12,8;CL:0000791,8.07e-11,9;CL:0000789,8.07e-11,9;CL:0002420,8.07e-11,9;CL:0002419,8.07e-11,9;CL:0000790,8.07e-11,9;CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!4.61e-07!5;UBERON:0002315!4.61e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.54e-29,3;UBERON:0001948,3.19e-18,5;UBERON:0002315,3.19e-18,5;UBERON:0002240,2.21e-15,6;UBERON:0005174,2.21e-15,6;UBERON:0001137,2.21e-15,6;UBERON:0003076,3.15e-08,12;UBERON:0003057,3.15e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,0,0.234064526321993,0,0.319088635981346,0.513602189793617,1.74840804837995,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0.56276261003168,0,1.47314292736834,1.42371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr8:84578004..84578010,+ | |||
}} |
Latest revision as of 04:19, 4 August 2015
Short description: | p@chr8:84578004..84578010, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:84578004..84578010, + |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.54e-29 | 3 |
regulatory T cell | 3.06e-23 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.06e-23 | 1 |
CD4-positive, alpha-beta T cell | 4.89e-12 | 8 |
mature alpha-beta T cell | 8.07e-11 | 9 |
alpha-beta T cell | 8.07e-11 | 9 |
immature T cell | 8.07e-11 | 9 |
mature T cell | 8.07e-11 | 9 |
immature alpha-beta T cell | 8.07e-11 | 9 |
T cell | 4.82e-09 | 11 |
pro-T cell | 4.82e-09 | 11 |
lymphoid lineage restricted progenitor cell | 2.25e-08 | 12 |
lymphocyte | 8.31e-08 | 13 |
common lymphoid progenitor | 8.31e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.54e-29 | 3 |
regional part of spinal cord | 3.19e-18 | 5 |
gray matter of spinal cord | 3.19e-18 | 5 |
spinal cord | 2.21e-15 | 6 |
dorsal region element | 2.21e-15 | 6 |
dorsum | 2.21e-15 | 6 |
posterior neural tube | 3.15e-08 | 12 |
chordal neural plate | 3.15e-08 | 12 |