FFCP PHASE1:Mm9::chr11:82930505..82930523,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20555|HGNC=|MCL_coexpression_id=3|UniProt=Q9Z0I7|association_with_transcript=154bp_to_ENSMUST00000037994_5end|description=CAGE_peak_2_at_Slfn1_5end|id=chr11:82930505..82930523,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,1.08e-10,25;CL:0000553,4.46e-09,6;CL:0000556,4.46e-09,6;CL:0000791,6.72e-08,9;CL:0000789,6.72e-08,9;CL:0002420,6.72e-08,9;CL:0002419,6.72e-08,9;CL:0000790,6.72e-08,9;CL:0000988,1.58e-07,32;CL:0002032,1.58e-07,32;CL:0000037,1.58e-07,32;CL:0000837,1.58e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.40e-12!193;UBERON:0004120!3.40e-12!193;UBERON:0006603!3.40e-12!193;UBERON:0002193!2.71e-10!48;UBERON:0002390!3.55e-10!45;UBERON:0003061!3.55e-10!45;UBERON:0002405!1.78e-09!70;UBERON:0003104!9.42e-09!131;UBERON:0009142!9.42e-09!131;UBERON:0004177!5.34e-08!29;UBERON:0000077!9.30e-08!97;UBERON:0003081!1.10e-07!88;UBERON:0001041!2.86e-07!92;UBERON:0005057!7.63e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.60e-10,6;UBERON:0004457,5.60e-10,6;UBERON:0000042,5.60e-10,6;UBERON:0004854,5.60e-10,6;UBERON:0009034,5.60e-10,6;UBERON:0002095,5.60e-10,6;UBERON:0004782,5.60e-10,6;UBERON:0003281,5.60e-10,6;UBERON:0009664,5.60e-10,6;UBERON:0002296,5.60e-10,6;UBERON:0005602,5.60e-10,6;UBERON:0001179,5.60e-10,6;UBERON:0006293,5.60e-10,6;UBERON:0003887,1.97e-09,10;UBERON:0002193,2.47e-09,48;UBERON:0002405,2.47e-09,48;UBERON:0002390,4.59e-09,45;UBERON:0003061,4.59e-09,45;UBERON:0002204,5.69e-08,32;UBERON:0001474,1.02e-07,22;UBERON:0004765,1.02e-07,22;UBERON:0001434,1.02e-07,22;UBERON:0002048,5.48e-07,14;UBERON:0000117,5.48e-07,14;UBERON:0000171,5.48e-07,14;UBERON:0000170,5.48e-07,14;UBERON:0005597,5.48e-07,14;UBERON:0000118,5.48e-07,14|phase1_expression=0,0,0,0,0,0,0,8.39301602370246,1.12630977721333,2.10658073689794,0.34243593645101,0.638177271962691,15.7504671536709,8.82946064431874,3.66420737997229,2.42970320867791,1.39912375625629,4.25873923233621,2.87940310572051,4.2438965179803,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,327.710266866999,181.269799929522,256.003110803187,265.292401101987,268.436875588669,255.378445694387,0,0,0,0,0,0,0,0,0,0,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,8.2860122767095,0.593768556259299,0,0.913396434936424,0.922461989024234,0.150722640552623,0.587943535678524,0.125666591329675,0.247194967734374,1.73519228303894,13.2691582792481,1.29413479957927,3.3126227769059,4.363877278217,0,0,0,0,0,0,0.127070227073065,0,0.457500602818626,0,0,0,0,0,0.611036183101898,7.34001126599549,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.61734640922383,0.199034266818493,0.702213187313235,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.817357396570186,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.126473074248515,0.295220295959204,0,0,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0.964708639009667,1.2731292589071,3.74004978686054,1.78348749452539,1.37280706594041,0,1.48856379067401,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,5.91210208533135,0,0,0.169745085775188,0,0.670025029767263,1.6663054862021,1.95133647857799,2.20689201748667,1.7717175171902,1.2756381492599,2.62181303545181,3.7990696010497,1.3018415272336,1.50791283939272,4.35124547054968,0.983528546038072,1.10374698521893,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.989820737835213,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.65954501176592,0.322928853391811,0.361877549568935,0,0,0.582961673259701,0,6.83483523191411,9.08102219038179,31.8534587075904,2.82552685507037,2.59719032669948,3.20289442489132,0,0.279902904647316,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0.506868376472335,0.821500670520278,0.13020438484395,0,0,0.576060012515731,1.58005560314089,0,0.308132871494482,0.649604114888975,0.537080087002444,0.596044064343795,0.600977247599844,0.443068581523732,0.706765149637033,0.304827226619999,0.705783295957884,0.974578807397524,0.962118416403295,1.75315353272353,0,0,0.0897138566094757,0,0.579568782096571,0.93841237725591,1.83151624267265,1.92931541171159,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0,0.187283014939765,0.448176066834085,0.574354689556133,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.492522411877817,1.63692417267876,0.154936841185966,0.192906610981141,0.249810577937946,1.87145286756327,0.644613162144895,1.53030665655075,1.98532277207564,1.62307484934295|short_description=p2@Slfn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20555 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0I7 | |||
|association_with_transcript=154bp_to_ENSMUST00000037994_5end | |||
|cluster_id=chr11:82930505..82930523,+ | |||
|description=CAGE_peak_2_at_Slfn1_5end | |||
|id=chr11:82930505..82930523,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.08e-10,25;CL:0000553,4.46e-09,6;CL:0000556,4.46e-09,6;CL:0000791,6.72e-08,9;CL:0000789,6.72e-08,9;CL:0002420,6.72e-08,9;CL:0002419,6.72e-08,9;CL:0000790,6.72e-08,9;CL:0000988,1.58e-07,32;CL:0002032,1.58e-07,32;CL:0000037,1.58e-07,32;CL:0000837,1.58e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.40e-12!193;UBERON:0004120!3.40e-12!193;UBERON:0006603!3.40e-12!193;UBERON:0002193!2.71e-10!48;UBERON:0002390!3.55e-10!45;UBERON:0003061!3.55e-10!45;UBERON:0002405!1.78e-09!70;UBERON:0003104!9.42e-09!131;UBERON:0009142!9.42e-09!131;UBERON:0004177!5.34e-08!29;UBERON:0000077!9.30e-08!97;UBERON:0003081!1.10e-07!88;UBERON:0001041!2.86e-07!92;UBERON:0005057!7.63e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.60e-10,6;UBERON:0004457,5.60e-10,6;UBERON:0000042,5.60e-10,6;UBERON:0004854,5.60e-10,6;UBERON:0009034,5.60e-10,6;UBERON:0002095,5.60e-10,6;UBERON:0004782,5.60e-10,6;UBERON:0003281,5.60e-10,6;UBERON:0009664,5.60e-10,6;UBERON:0002296,5.60e-10,6;UBERON:0005602,5.60e-10,6;UBERON:0001179,5.60e-10,6;UBERON:0006293,5.60e-10,6;UBERON:0003887,1.97e-09,10;UBERON:0002193,2.47e-09,48;UBERON:0002405,2.47e-09,48;UBERON:0002390,4.59e-09,45;UBERON:0003061,4.59e-09,45;UBERON:0002204,5.69e-08,32;UBERON:0001474,1.02e-07,22;UBERON:0004765,1.02e-07,22;UBERON:0001434,1.02e-07,22;UBERON:0002048,5.48e-07,14;UBERON:0000117,5.48e-07,14;UBERON:0000171,5.48e-07,14;UBERON:0000170,5.48e-07,14;UBERON:0005597,5.48e-07,14;UBERON:0000118,5.48e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,8.39301602370246,1.12630977721333,2.10658073689794,0.34243593645101,0.638177271962691,15.7504671536709,8.82946064431874,3.66420737997229,2.42970320867791,1.39912375625629,4.25873923233621,2.87940310572051,4.2438965179803,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,327.710266866999,181.269799929522,256.003110803187,265.292401101987,268.436875588669,255.378445694387,0,0,0,0,0,0,0,0,0,0,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,8.2860122767095,0.593768556259299,0,0.913396434936424,0.922461989024234,0.150722640552623,0.587943535678524,0.125666591329675,0.247194967734374,1.73519228303894,13.2691582792481,1.29413479957927,3.3126227769059,4.363877278217,0,0,0,0,0,0,0.127070227073065,0,0.457500602818626,0,0,0,0,0,0.611036183101898,7.34001126599549,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.61734640922383,0.199034266818493,0.702213187313235,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.817357396570186,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.126473074248515,0.295220295959204,0,0,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0.964708639009667,1.2731292589071,3.74004978686054,1.78348749452539,1.37280706594041,0,1.48856379067401,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,5.91210208533135,0,0,0.169745085775188,0,0.670025029767263,1.6663054862021,1.95133647857799,2.20689201748667,1.7717175171902,1.2756381492599,2.62181303545181,3.7990696010497,1.3018415272336,1.50791283939272,4.35124547054968,0.983528546038072,1.10374698521893,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.989820737835213,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.65954501176592,0.322928853391811,0.361877549568935,0,0,0.582961673259701,0,6.83483523191411,9.08102219038179,31.8534587075904,2.82552685507037,2.59719032669948,3.20289442489132,0,0.279902904647316,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0.506868376472335,0.821500670520278,0.13020438484395,0,0,0.576060012515731,1.58005560314089,0,0.308132871494482,0.649604114888975,0.537080087002444,0.596044064343795,0.600977247599844,0.443068581523732,0.706765149637033,0.304827226619999,0.705783295957884,0.974578807397524,0.962118416403295,1.75315353272353,0,0,0.0897138566094757,0,0.579568782096571,0.93841237725591,1.83151624267265,1.92931541171159,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0,0.187283014939765,0.448176066834085,0.574354689556133,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.492522411877817,1.63692417267876,0.154936841185966,0.192906610981141,0.249810577937946,1.87145286756327,0.644613162144895,1.53030665655075,1.98532277207564,1.62307484934295 | |||
|short_description=p2@Slfn1 | |||
}} |
Revision as of 04:10, 4 August 2015
Short description: | p2@Slfn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slfn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 154bp_to_ENSMUST00000037994_5end |
EntrezGene: | 20555 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.08e-10 | 25 |
megakaryocyte progenitor cell | 4.46e-09 | 6 |
megakaryocyte | 4.46e-09 | 6 |
mature alpha-beta T cell | 6.72e-08 | 9 |
alpha-beta T cell | 6.72e-08 | 9 |
immature T cell | 6.72e-08 | 9 |
mature T cell | 6.72e-08 | 9 |
immature alpha-beta T cell | 6.72e-08 | 9 |
hematopoietic cell | 1.58e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.58e-07 | 32 |
hematopoietic stem cell | 1.58e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.58e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.60e-10 | 6 |
cavity lining | 5.60e-10 | 6 |
serous membrane | 5.60e-10 | 6 |
gastrointestinal system mesentery | 5.60e-10 | 6 |
stomach region | 5.60e-10 | 6 |
mesentery | 5.60e-10 | 6 |
gastrointestinal system serosa | 5.60e-10 | 6 |
mesentery of stomach | 5.60e-10 | 6 |
gut mesentery | 5.60e-10 | 6 |
dorsal mesentery | 5.60e-10 | 6 |
dorsal mesogastrium | 5.60e-10 | 6 |
peritoneal cavity | 5.60e-10 | 6 |
spleen primordium | 5.60e-10 | 6 |
intraembryonic coelom | 1.97e-09 | 10 |
hemolymphoid system | 2.47e-09 | 48 |
immune system | 2.47e-09 | 48 |
hematopoietic system | 4.59e-09 | 45 |
blood island | 4.59e-09 | 45 |
musculoskeletal system | 5.69e-08 | 32 |
bone element | 1.02e-07 | 22 |
skeletal element | 1.02e-07 | 22 |
skeletal system | 1.02e-07 | 22 |
lung | 5.48e-07 | 14 |
respiratory tube | 5.48e-07 | 14 |
respiration organ | 5.48e-07 | 14 |
pair of lungs | 5.48e-07 | 14 |
lung primordium | 5.48e-07 | 14 |
lung bud | 5.48e-07 | 14 |