FFCP PHASE1:Mm9::chr3:88004177..88004191,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=87|UniProt=|association_with_transcript=-353bp_to_ENSMUST00000167043_5end|description=CAGE_peak_3_at_ENSMUST00000167043_5end|id=chr3:88004177..88004191,+|ontology_enrichment_celltype=CL:0000117!2.00e-24!23;CL:0000337!2.00e-24!23;CL:0002319!4.07e-18!43;CL:0000221!1.87e-17!44;CL:0000133!1.87e-17!44;CL:0000540!2.30e-14!33;CL:0000047!2.30e-14!33;CL:0000031!2.30e-14!33;CL:0000404!2.30e-14!33;CL:0000055!4.57e-14!50;CL:0000393!6.70e-11!39;CL:0000211!6.70e-11!39;CL:0002321!2.95e-07!70;CL:0000220!2.95e-07!70;CL:0002609!6.86e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,8.92e-35,23;CL:0000337,8.92e-35,23;CL:0000540,4.28e-22,33;CL:0000047,4.28e-22,33;CL:0000031,4.28e-22,33;CL:0000404,4.28e-22,33;CL:0002319,7.29e-22,43;CL:0000221,3.47e-21,44;CL:0000133,3.47e-21,44;CL:0000393,1.23e-17,39;CL:0000211,1.23e-17,39;CL:0002321,1.78e-10,70;CL:0002609,2.66e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.76e-35!73;UBERON:0005743!4.76e-35!73;UBERON:0000073!8.88e-35!75;UBERON:0001016!8.88e-35!75;UBERON:0002020!1.79e-32!34;UBERON:0001049!4.86e-32!52;UBERON:0005068!4.86e-32!52;UBERON:0006241!4.86e-32!52;UBERON:0007135!4.86e-32!52;UBERON:0000955!2.09e-29!50;UBERON:0006238!2.09e-29!50;UBERON:0002616!1.48e-28!49;UBERON:0002791!3.21e-26!29;UBERON:0003528!3.21e-26!29;UBERON:0001893!3.21e-26!29;UBERON:0003080!5.95e-22!40;UBERON:0004121!2.40e-21!102;UBERON:0000924!2.40e-21!102;UBERON:0006601!2.40e-21!102;UBERON:0000033!2.91e-21!63;UBERON:0002780!4.69e-21!39;UBERON:0001890!4.69e-21!39;UBERON:0006240!4.69e-21!39;UBERON:0002346!3.21e-20!71;UBERON:0003075!3.21e-20!71;UBERON:0007284!3.21e-20!71;UBERON:0000956!3.20e-19!21;UBERON:0001869!3.20e-19!21;UBERON:0000203!3.20e-19!21;UBERON:0003056!9.26e-17!49;UBERON:0002619!1.24e-15!17;UBERON:0007811!7.74e-12!86;UBERON:0003076!1.70e-10!12;UBERON:0003057!1.70e-10!12;UBERON:0002021!4.27e-10!10;UBERON:0000411!4.27e-10!10;UBERON:0001950!4.27e-10!10;UBERON:0000153!9.94e-10!94;UBERON:0002420!4.78e-08!8;UBERON:0007245!4.78e-08!8;UBERON:0010009!4.78e-08!8;UBERON:0010011!4.78e-08!8;UBERON:0000454!4.78e-08!8;UBERON:0002240!6.74e-08!6;UBERON:0005174!6.74e-08!6;UBERON:0001137!6.74e-08!6;UBERON:0001948!2.19e-07!5;UBERON:0002315!2.19e-07!5;UBERON:0001954!5.72e-07!7;UBERON:0003022!5.72e-07!7;UBERON:0002421!5.72e-07!7;UBERON:0000349!5.72e-07!7;UBERON:0002600!5.72e-07!7;UBERON:0000025!6.39e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-43,73;UBERON:0001016,4.60e-42,75;UBERON:0000073,6.87e-42,54;UBERON:0001049,2.82e-38,52;UBERON:0005068,2.82e-38,52;UBERON:0006241,2.82e-38,52;UBERON:0007135,2.82e-38,52;UBERON:0002020,4.07e-37,34;UBERON:0004121,1.48e-30,95;UBERON:0000924,1.48e-30,95;UBERON:0006601,1.48e-30,95;UBERON:0000955,2.77e-30,47;UBERON:0006238,2.77e-30,47;UBERON:0002616,3.84e-29,46;UBERON:0002346,4.58e-29,64;UBERON:0003075,4.58e-29,64;UBERON:0007284,4.58e-29,64;UBERON:0003528,1.73e-28,29;UBERON:0002791,1.73e-28,29;UBERON:0001893,1.73e-28,29;UBERON:0010371,3.72e-24,73;UBERON:0003080,3.80e-24,40;UBERON:0002780,6.18e-23,39;UBERON:0001890,6.18e-23,39;UBERON:0006240,6.18e-23,39;UBERON:0000956,9.99e-21,21;UBERON:0001869,9.99e-21,21;UBERON:0000203,9.99e-21,21;UBERON:0003056,2.99e-18,49;UBERON:0010314,5.62e-17,92;UBERON:0002619,1.07e-15,17;UBERON:0003076,8.87e-15,12;UBERON:0003057,8.87e-15,12;UBERON:0002021,1.02e-11,10;UBERON:0000411,1.02e-11,10;UBERON:0001950,1.02e-11,10;UBERON:0000025,1.04e-11,114;UBERON:0002240,9.32e-11,6;UBERON:0005174,9.32e-11,6;UBERON:0001137,9.32e-11,6;UBERON:0004111,2.79e-10,122;UBERON:0001948,5.14e-10,5;UBERON:0002315,5.14e-10,5;UBERON:0002420,9.33e-09,8;UBERON:0007245,9.33e-09,8;UBERON:0010009,9.33e-09,8;UBERON:0010011,9.33e-09,8;UBERON:0000454,9.33e-09,8;UBERON:0011216,1.35e-08,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,0.58328969722285,0.699932108126813,4.31257693094915,0,0,0,0,0,0,4.24864567805155,11.6378015439847,8.23980824558033,0,0,0,0,0,1.19840044207362,1.92109152660777,2.38486108309499,7.02030879324791,1.89292465216244,12.2829923293636,9.93908434282261,1.5923803897944,1.72521847832825,5.51531271966013,5.50579404996943,2.42605942361857,4.76180253094355,1.97829431595291,1.82975287204819,2.08365348222704,1.3959149950069,5.06486349028512,2.13917546887534,12.6690291753677,14.5219114415085,13.047961207771,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,1.25668024088073,0,0,0,0,2.24685959107234,0.915001205637253,2.89005009859588,1.39059456153821,0.511430914660661,2.0778804455956,1.46017136760982,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,4.52780294468852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,4.14292712856459,4.01026859407578,1.71853182343688,2.74033007908257,3.0215755895588,0.675022500231806,2.2516060161211,3.17199686288943,1.55328093525546,1.14166082342594,5.1873233542134,3.41467211508268,0.972426868273176,1.46729213839588,0.735374033800057,0.222246727801615,0.618105171716683,0.64183841918363,0.758091635291392,1.52087579934144,0.377252682772152,0.655490552289177,0.448176066834085,0.574354689556133,0,0.347652977834566,0.38581844092741,0,1.03039244094078,0.342869252385415,0.532427418478012,1.1921809497366,0.872078499793971,0.470546902076653,0.507687647350059,1.28049581010941,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.77468420592983,0.192906610981141,1.74867404556562,0.233931608445408,0.429742108096597,0.57386499620653,0,0.231867835620421|short_description=p3@ENSMUST00000167043}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-353bp_to_ENSMUST00000167043_5end | |||
|cluster_id=chr3:88004177..88004191,+ | |||
|description=CAGE_peak_3_at_ENSMUST00000167043_5end | |||
|id=chr3:88004177..88004191,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.00e-24!23;CL:0000337!2.00e-24!23;CL:0002319!4.07e-18!43;CL:0000221!1.87e-17!44;CL:0000133!1.87e-17!44;CL:0000540!2.30e-14!33;CL:0000047!2.30e-14!33;CL:0000031!2.30e-14!33;CL:0000404!2.30e-14!33;CL:0000055!4.57e-14!50;CL:0000393!6.70e-11!39;CL:0000211!6.70e-11!39;CL:0002321!2.95e-07!70;CL:0000220!2.95e-07!70;CL:0002609!6.86e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.92e-35,23;CL:0000337,8.92e-35,23;CL:0000540,4.28e-22,33;CL:0000047,4.28e-22,33;CL:0000031,4.28e-22,33;CL:0000404,4.28e-22,33;CL:0002319,7.29e-22,43;CL:0000221,3.47e-21,44;CL:0000133,3.47e-21,44;CL:0000393,1.23e-17,39;CL:0000211,1.23e-17,39;CL:0002321,1.78e-10,70;CL:0002609,2.66e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.76e-35!73;UBERON:0005743!4.76e-35!73;UBERON:0000073!8.88e-35!75;UBERON:0001016!8.88e-35!75;UBERON:0002020!1.79e-32!34;UBERON:0001049!4.86e-32!52;UBERON:0005068!4.86e-32!52;UBERON:0006241!4.86e-32!52;UBERON:0007135!4.86e-32!52;UBERON:0000955!2.09e-29!50;UBERON:0006238!2.09e-29!50;UBERON:0002616!1.48e-28!49;UBERON:0002791!3.21e-26!29;UBERON:0003528!3.21e-26!29;UBERON:0001893!3.21e-26!29;UBERON:0003080!5.95e-22!40;UBERON:0004121!2.40e-21!102;UBERON:0000924!2.40e-21!102;UBERON:0006601!2.40e-21!102;UBERON:0000033!2.91e-21!63;UBERON:0002780!4.69e-21!39;UBERON:0001890!4.69e-21!39;UBERON:0006240!4.69e-21!39;UBERON:0002346!3.21e-20!71;UBERON:0003075!3.21e-20!71;UBERON:0007284!3.21e-20!71;UBERON:0000956!3.20e-19!21;UBERON:0001869!3.20e-19!21;UBERON:0000203!3.20e-19!21;UBERON:0003056!9.26e-17!49;UBERON:0002619!1.24e-15!17;UBERON:0007811!7.74e-12!86;UBERON:0003076!1.70e-10!12;UBERON:0003057!1.70e-10!12;UBERON:0002021!4.27e-10!10;UBERON:0000411!4.27e-10!10;UBERON:0001950!4.27e-10!10;UBERON:0000153!9.94e-10!94;UBERON:0002420!4.78e-08!8;UBERON:0007245!4.78e-08!8;UBERON:0010009!4.78e-08!8;UBERON:0010011!4.78e-08!8;UBERON:0000454!4.78e-08!8;UBERON:0002240!6.74e-08!6;UBERON:0005174!6.74e-08!6;UBERON:0001137!6.74e-08!6;UBERON:0001948!2.19e-07!5;UBERON:0002315!2.19e-07!5;UBERON:0001954!5.72e-07!7;UBERON:0003022!5.72e-07!7;UBERON:0002421!5.72e-07!7;UBERON:0000349!5.72e-07!7;UBERON:0002600!5.72e-07!7;UBERON:0000025!6.39e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-43,73;UBERON:0001016,4.60e-42,75;UBERON:0000073,6.87e-42,54;UBERON:0001049,2.82e-38,52;UBERON:0005068,2.82e-38,52;UBERON:0006241,2.82e-38,52;UBERON:0007135,2.82e-38,52;UBERON:0002020,4.07e-37,34;UBERON:0004121,1.48e-30,95;UBERON:0000924,1.48e-30,95;UBERON:0006601,1.48e-30,95;UBERON:0000955,2.77e-30,47;UBERON:0006238,2.77e-30,47;UBERON:0002616,3.84e-29,46;UBERON:0002346,4.58e-29,64;UBERON:0003075,4.58e-29,64;UBERON:0007284,4.58e-29,64;UBERON:0003528,1.73e-28,29;UBERON:0002791,1.73e-28,29;UBERON:0001893,1.73e-28,29;UBERON:0010371,3.72e-24,73;UBERON:0003080,3.80e-24,40;UBERON:0002780,6.18e-23,39;UBERON:0001890,6.18e-23,39;UBERON:0006240,6.18e-23,39;UBERON:0000956,9.99e-21,21;UBERON:0001869,9.99e-21,21;UBERON:0000203,9.99e-21,21;UBERON:0003056,2.99e-18,49;UBERON:0010314,5.62e-17,92;UBERON:0002619,1.07e-15,17;UBERON:0003076,8.87e-15,12;UBERON:0003057,8.87e-15,12;UBERON:0002021,1.02e-11,10;UBERON:0000411,1.02e-11,10;UBERON:0001950,1.02e-11,10;UBERON:0000025,1.04e-11,114;UBERON:0002240,9.32e-11,6;UBERON:0005174,9.32e-11,6;UBERON:0001137,9.32e-11,6;UBERON:0004111,2.79e-10,122;UBERON:0001948,5.14e-10,5;UBERON:0002315,5.14e-10,5;UBERON:0002420,9.33e-09,8;UBERON:0007245,9.33e-09,8;UBERON:0010009,9.33e-09,8;UBERON:0010011,9.33e-09,8;UBERON:0000454,9.33e-09,8;UBERON:0011216,1.35e-08,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,0.58328969722285,0.699932108126813,4.31257693094915,0,0,0,0,0,0,4.24864567805155,11.6378015439847,8.23980824558033,0,0,0,0,0,1.19840044207362,1.92109152660777,2.38486108309499,7.02030879324791,1.89292465216244,12.2829923293636,9.93908434282261,1.5923803897944,1.72521847832825,5.51531271966013,5.50579404996943,2.42605942361857,4.76180253094355,1.97829431595291,1.82975287204819,2.08365348222704,1.3959149950069,5.06486349028512,2.13917546887534,12.6690291753677,14.5219114415085,13.047961207771,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,1.25668024088073,0,0,0,0,2.24685959107234,0.915001205637253,2.89005009859588,1.39059456153821,0.511430914660661,2.0778804455956,1.46017136760982,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,4.52780294468852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,4.14292712856459,4.01026859407578,1.71853182343688,2.74033007908257,3.0215755895588,0.675022500231806,2.2516060161211,3.17199686288943,1.55328093525546,1.14166082342594,5.1873233542134,3.41467211508268,0.972426868273176,1.46729213839588,0.735374033800057,0.222246727801615,0.618105171716683,0.64183841918363,0.758091635291392,1.52087579934144,0.377252682772152,0.655490552289177,0.448176066834085,0.574354689556133,0,0.347652977834566,0.38581844092741,0,1.03039244094078,0.342869252385415,0.532427418478012,1.1921809497366,0.872078499793971,0.470546902076653,0.507687647350059,1.28049581010941,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.77468420592983,0.192906610981141,1.74867404556562,0.233931608445408,0.429742108096597,0.57386499620653,0,0.231867835620421 | |||
|short_description=p3@ENSMUST00000167043 | |||
}} |
Latest revision as of 03:40, 4 August 2015
Short description: | p3@ENSMUST00000167043 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000167043_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -353bp_to_ENSMUST00000167043_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.92e-35 | 23 |
neuroblast (sensu Vertebrata) | 8.92e-35 | 23 |
neuron | 4.28e-22 | 33 |
neuronal stem cell | 4.28e-22 | 33 |
neuroblast | 4.28e-22 | 33 |
electrically signaling cell | 4.28e-22 | 33 |
neural cell | 7.29e-22 | 43 |
ectodermal cell | 3.47e-21 | 44 |
neurectodermal cell | 3.47e-21 | 44 |
electrically responsive cell | 1.23e-17 | 39 |
electrically active cell | 1.23e-17 | 39 |
embryonic cell | 1.78e-10 | 70 |
neuron of cerebral cortex | 2.66e-09 | 6 |