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FFCP PHASE1:Mm9::chr2:136213540..136213556,-: Difference between revisions

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{{FFCP|EntrezGene=241656|HGNC=|MCL_coexpression_id=13|UniProt=Q8C015|association_with_transcript=117bp_to_ENSMUST00000035264_5end|description=CAGE_peak_3_at_Pak7_5end|id=chr2:136213540..136213556,-|ontology_enrichment_celltype=CL:0000117!1.59e-12!23;CL:0000337!1.59e-12!23;CL:0000540!1.28e-11!33;CL:0000047!1.28e-11!33;CL:0000031!1.28e-11!33;CL:0000404!1.28e-11!33;CL:0000393!2.68e-08!39;CL:0000211!2.68e-08!39;CL:0002319!3.17e-07!43;CL:0000221!7.47e-07!44;CL:0000133!7.47e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-09,23;CL:0000337,1.31e-09,23;CL:0002613,5.37e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.95e-23!71;UBERON:0003075!3.95e-23!71;UBERON:0007284!3.95e-23!71;UBERON:0001017!8.13e-23!73;UBERON:0005743!8.13e-23!73;UBERON:0001049!1.13e-22!52;UBERON:0005068!1.13e-22!52;UBERON:0006241!1.13e-22!52;UBERON:0007135!1.13e-22!52;UBERON:0000073!1.37e-21!75;UBERON:0001016!1.37e-21!75;UBERON:0000033!7.15e-21!63;UBERON:0000955!9.96e-21!50;UBERON:0006238!9.96e-21!50;UBERON:0002616!4.15e-20!49;UBERON:0003056!1.10e-19!49;UBERON:0002020!1.16e-19!34;UBERON:0004121!6.59e-18!102;UBERON:0000924!6.59e-18!102;UBERON:0006601!6.59e-18!102;UBERON:0003080!1.03e-17!40;UBERON:0002780!4.54e-17!39;UBERON:0001890!4.54e-17!39;UBERON:0006240!4.54e-17!39;UBERON:0002791!4.71e-17!29;UBERON:0003528!4.71e-17!29;UBERON:0001893!4.71e-17!29;UBERON:0000956!3.86e-13!21;UBERON:0001869!3.86e-13!21;UBERON:0000203!3.86e-13!21;UBERON:0000153!6.77e-11!94;UBERON:0007811!1.21e-10!86;UBERON:0002619!3.16e-10!17;UBERON:0002021!5.05e-09!10;UBERON:0000411!5.05e-09!10;UBERON:0001950!5.05e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.62e-24,34;UBERON:0001049,4.40e-24,52;UBERON:0005068,4.40e-24,52;UBERON:0006241,4.40e-24,52;UBERON:0007135,4.40e-24,52;UBERON:0003528,9.06e-24,29;UBERON:0002791,9.06e-24,29;UBERON:0001893,9.06e-24,29;UBERON:0002616,1.11e-23,46;UBERON:0000955,4.90e-23,47;UBERON:0006238,4.90e-23,47;UBERON:0000073,6.22e-23,54;UBERON:0002346,1.38e-21,64;UBERON:0003075,1.38e-21,64;UBERON:0007284,1.38e-21,64;UBERON:0003080,2.11e-21,40;UBERON:0000956,1.63e-20,21;UBERON:0001869,1.63e-20,21;UBERON:0000203,1.63e-20,21;UBERON:0002780,4.06e-20,39;UBERON:0001890,4.06e-20,39;UBERON:0006240,4.06e-20,39;UBERON:0003056,6.17e-20,49;UBERON:0001017,2.93e-18,73;UBERON:0010371,5.05e-18,73;UBERON:0001016,1.41e-17,75;UBERON:0002021,2.51e-16,10;UBERON:0000411,2.51e-16,10;UBERON:0001950,2.51e-16,10;UBERON:0002619,3.39e-16,17;UBERON:0004121,1.15e-14,95;UBERON:0000924,1.15e-14,95;UBERON:0006601,1.15e-14,95;UBERON:0010314,8.32e-13,92;UBERON:0000369,6.34e-08,5;UBERON:0002435,6.34e-08,5;UBERON:0000204,6.34e-08,5;UBERON:0010082,6.34e-08,5;UBERON:0000025,2.47e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,2.7996195323289,0.675029691658453,2.10324961351382,0.285650984403804,0.441737081903227,2.9397791811589,1.53352753629178,0.919218786610021,0,0.766124028511126,0.614426133024974,4.48413378282659,4.02545631850602,3.12548022334056,0.837548997004143,0,0.916789486660861,2.06240009831567,0.854230084794618,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0.452167921657868,0,0,0,0,0,0,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,1.19832511523858,0.457500602818626,2.76439574648302,3.30266208365325,1.79000820131231,1.24672826735736,1.46017136760982,0.305518091550949,0,0,0.420883711772948,0.520481771850815,0,0,0.60281927134286,1.42876648217788,0.640568601424249,1.87403449119458,0.517406741478031,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.841159794256509,2.88132914661996,0,0,0.213288250535234,0.928946687441754,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.963303539926752,1.28932855251423,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.712262414669021,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.517434735131018,0,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.58678619322877,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,1.14579102687879,1.71853182343688,2.74033007908257,0.755393897389701,2.02506750069542,3.15224842256954,4.07828168085784,2.07104124700728,0.518936737920883,0.399024873401031,1.02440163452481,0.729320151204882,2.09613162627982,1.10306105070008,0,0.412070114477788,0.320919209591815,1.76888048234658,0.760437899670719,0.754505365544305,0.842773567228942,0.384150914429216,1.14870937911227,1.42888107384922,0.579421629724277,0.192909220463705,0,0.735994600671987,1.37147700954166,0.70990322463735,0.238436189947321,0.581385666529314,1.41164070622996,1.52306294205018,0.73171189149109,0.526139422875686,1.35804113845862,0.561142271657738,0.237270036248348,1.0835493061312,0.409231043169689,0.154936841185966,1.15743966588685,1.49886346762768,0.701794825336225,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p3@Pak7}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:241656
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=uniprot:Q8C015
|association_with_transcript=117bp_to_ENSMUST00000035264_5end
|cluster_id=chr2:136213540..136213556,-
|description=CAGE_peak_3_at_Pak7_5end
|id=chr2:136213540..136213556,-
|ontology_enrichment_celltype=CL:0000117!1.59e-12!23;CL:0000337!1.59e-12!23;CL:0000540!1.28e-11!33;CL:0000047!1.28e-11!33;CL:0000031!1.28e-11!33;CL:0000404!1.28e-11!33;CL:0000393!2.68e-08!39;CL:0000211!2.68e-08!39;CL:0002319!3.17e-07!43;CL:0000221!7.47e-07!44;CL:0000133!7.47e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-09,23;CL:0000337,1.31e-09,23;CL:0002613,5.37e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.95e-23!71;UBERON:0003075!3.95e-23!71;UBERON:0007284!3.95e-23!71;UBERON:0001017!8.13e-23!73;UBERON:0005743!8.13e-23!73;UBERON:0001049!1.13e-22!52;UBERON:0005068!1.13e-22!52;UBERON:0006241!1.13e-22!52;UBERON:0007135!1.13e-22!52;UBERON:0000073!1.37e-21!75;UBERON:0001016!1.37e-21!75;UBERON:0000033!7.15e-21!63;UBERON:0000955!9.96e-21!50;UBERON:0006238!9.96e-21!50;UBERON:0002616!4.15e-20!49;UBERON:0003056!1.10e-19!49;UBERON:0002020!1.16e-19!34;UBERON:0004121!6.59e-18!102;UBERON:0000924!6.59e-18!102;UBERON:0006601!6.59e-18!102;UBERON:0003080!1.03e-17!40;UBERON:0002780!4.54e-17!39;UBERON:0001890!4.54e-17!39;UBERON:0006240!4.54e-17!39;UBERON:0002791!4.71e-17!29;UBERON:0003528!4.71e-17!29;UBERON:0001893!4.71e-17!29;UBERON:0000956!3.86e-13!21;UBERON:0001869!3.86e-13!21;UBERON:0000203!3.86e-13!21;UBERON:0000153!6.77e-11!94;UBERON:0007811!1.21e-10!86;UBERON:0002619!3.16e-10!17;UBERON:0002021!5.05e-09!10;UBERON:0000411!5.05e-09!10;UBERON:0001950!5.05e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.62e-24,34;UBERON:0001049,4.40e-24,52;UBERON:0005068,4.40e-24,52;UBERON:0006241,4.40e-24,52;UBERON:0007135,4.40e-24,52;UBERON:0003528,9.06e-24,29;UBERON:0002791,9.06e-24,29;UBERON:0001893,9.06e-24,29;UBERON:0002616,1.11e-23,46;UBERON:0000955,4.90e-23,47;UBERON:0006238,4.90e-23,47;UBERON:0000073,6.22e-23,54;UBERON:0002346,1.38e-21,64;UBERON:0003075,1.38e-21,64;UBERON:0007284,1.38e-21,64;UBERON:0003080,2.11e-21,40;UBERON:0000956,1.63e-20,21;UBERON:0001869,1.63e-20,21;UBERON:0000203,1.63e-20,21;UBERON:0002780,4.06e-20,39;UBERON:0001890,4.06e-20,39;UBERON:0006240,4.06e-20,39;UBERON:0003056,6.17e-20,49;UBERON:0001017,2.93e-18,73;UBERON:0010371,5.05e-18,73;UBERON:0001016,1.41e-17,75;UBERON:0002021,2.51e-16,10;UBERON:0000411,2.51e-16,10;UBERON:0001950,2.51e-16,10;UBERON:0002619,3.39e-16,17;UBERON:0004121,1.15e-14,95;UBERON:0000924,1.15e-14,95;UBERON:0006601,1.15e-14,95;UBERON:0010314,8.32e-13,92;UBERON:0000369,6.34e-08,5;UBERON:0002435,6.34e-08,5;UBERON:0000204,6.34e-08,5;UBERON:0010082,6.34e-08,5;UBERON:0000025,2.47e-07,114
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,2.7996195323289,0.675029691658453,2.10324961351382,0.285650984403804,0.441737081903227,2.9397791811589,1.53352753629178,0.919218786610021,0,0.766124028511126,0.614426133024974,4.48413378282659,4.02545631850602,3.12548022334056,0.837548997004143,0,0.916789486660861,2.06240009831567,0.854230084794618,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0.452167921657868,0,0,0,0,0,0,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,1.19832511523858,0.457500602818626,2.76439574648302,3.30266208365325,1.79000820131231,1.24672826735736,1.46017136760982,0.305518091550949,0,0,0.420883711772948,0.520481771850815,0,0,0.60281927134286,1.42876648217788,0.640568601424249,1.87403449119458,0.517406741478031,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.841159794256509,2.88132914661996,0,0,0.213288250535234,0.928946687441754,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.963303539926752,1.28932855251423,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.712262414669021,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.517434735131018,0,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.58678619322877,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,1.14579102687879,1.71853182343688,2.74033007908257,0.755393897389701,2.02506750069542,3.15224842256954,4.07828168085784,2.07104124700728,0.518936737920883,0.399024873401031,1.02440163452481,0.729320151204882,2.09613162627982,1.10306105070008,0,0.412070114477788,0.320919209591815,1.76888048234658,0.760437899670719,0.754505365544305,0.842773567228942,0.384150914429216,1.14870937911227,1.42888107384922,0.579421629724277,0.192909220463705,0,0.735994600671987,1.37147700954166,0.70990322463735,0.238436189947321,0.581385666529314,1.41164070622996,1.52306294205018,0.73171189149109,0.526139422875686,1.35804113845862,0.561142271657738,0.237270036248348,1.0835493061312,0.409231043169689,0.154936841185966,1.15743966588685,1.49886346762768,0.701794825336225,0.214871054048298,0.191288332068843,0,0.231867835620421
|short_description=p3@Pak7
}}

Revision as of 03:37, 4 August 2015

Short description:p3@Pak7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pak7_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 117bp_to_ENSMUST00000035264_5end
EntrezGene:241656
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Pak7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.31e-0923
neuroblast (sensu Vertebrata)1.31e-0923
striatum neuron5.37e-083

Uber anatomy
Ontology termp-valuen
gray matter3.62e-2434
neural tube4.40e-2452
neural rod4.40e-2452
future spinal cord4.40e-2452
neural keel4.40e-2452
brain grey matter9.06e-2429
regional part of telencephalon9.06e-2429
telencephalon9.06e-2429
regional part of brain1.11e-2346
brain4.90e-2347
future brain4.90e-2347
regional part of nervous system6.22e-2354
neurectoderm1.38e-2164
neural plate1.38e-2164
presumptive neural plate1.38e-2164
anterior neural tube2.11e-2140
cerebral cortex1.63e-2021
cerebral hemisphere1.63e-2021
pallium1.63e-2021
regional part of forebrain4.06e-2039
forebrain4.06e-2039
future forebrain4.06e-2039
pre-chordal neural plate6.17e-2049
central nervous system2.93e-1873
ecto-epithelium5.05e-1873
nervous system1.41e-1775
occipital lobe2.51e-1610
visual cortex2.51e-1610
neocortex2.51e-1610
regional part of cerebral cortex3.39e-1617
ectoderm-derived structure1.15e-1495
ectoderm1.15e-1495
presumptive ectoderm1.15e-1495
structure with developmental contribution from neural crest8.32e-1392
corpus striatum6.34e-085
striatum6.34e-085
ventral part of telencephalon6.34e-085
future corpus striatum6.34e-085
tube2.47e-07114
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