FFCP PHASE1:Mm9::chr3:87180382..87180387,+: Difference between revisions
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{{FFCP|EntrezGene=229499|HGNC=|MCL_coexpression_id=18|UniProt=Q8R4Y0,E9Q958,E9Q5S9|association_with_transcript=73bp_to_ENSMUST00000072480,ENSMUST00000163661,ENSMUST00000167200,NM_001136236,NM_153090,NM_178165,uc008psb.2,uc008psc.2,uc008psd.2_5end|description=CAGE_peak_4_at_Fcrl1_5end|id=chr3:87180382..87180387,+|ontology_enrichment_celltype=CL:0000553!5.78e-16!6;CL:0000556!5.78e-16!6;CL:0000050!2.29e-10!9;CL:0002031!1.32e-08!25;CL:0002027!1.71e-08!3;CL:0002006!1.71e-08!3;CL:0002024!1.71e-08!3;CL:0000414!2.49e-08!11;CL:0000988!1.52e-07!32;CL:0002032!1.52e-07!32;CL:0000037!1.52e-07!32;CL:0000566!1.52e-07!32;CL:0000837!1.52e-07!32;CL:0000839!6.37e-07!13|ontology_enrichment_celltype_v019_2=CL:0000553,5.03e-22,6;CL:0000556,5.03e-22,6;CL:0000050,8.11e-15,9;CL:0000839,2.34e-10,13;CL:0000945,2.09e-09,1;CL:0000236,2.09e-09,1;CL:0000826,2.09e-09,1;CL:0000763,1.82e-08,16;CL:0002031,3.43e-08,25;CL:0000049,3.63e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.25e-13!48;UBERON:0002390!1.32e-10!45;UBERON:0003061!1.32e-10!45;UBERON:0003887!1.47e-08!10;UBERON:0002405!1.48e-07!70;UBERON:0002106!2.80e-07!6;UBERON:0004457!2.80e-07!6;UBERON:0000042!2.80e-07!6;UBERON:0004854!2.80e-07!6;UBERON:0009034!2.80e-07!6;UBERON:0002095!2.80e-07!6;UBERON:0004782!2.80e-07!6;UBERON:0003281!2.80e-07!6;UBERON:0009664!2.80e-07!6;UBERON:0002296!2.80e-07!6;UBERON:0005602!2.80e-07!6;UBERON:0001179!2.80e-07!6;UBERON:0006293!2.80e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.82e-13,48;UBERON:0002405,5.82e-13,48;UBERON:0002106,1.73e-12,6;UBERON:0004457,1.73e-12,6;UBERON:0000042,1.73e-12,6;UBERON:0004854,1.73e-12,6;UBERON:0009034,1.73e-12,6;UBERON:0002095,1.73e-12,6;UBERON:0004782,1.73e-12,6;UBERON:0003281,1.73e-12,6;UBERON:0009664,1.73e-12,6;UBERON:0002296,1.73e-12,6;UBERON:0005602,1.73e-12,6;UBERON:0001179,1.73e-12,6;UBERON:0006293,1.73e-12,6;UBERON:0002465,1.21e-11,3;UBERON:0000029,9.82e-10,1;UBERON:0001097,9.82e-10,1;UBERON:0003968,9.82e-10,1;UBERON:0001467,9.82e-10,1;UBERON:0001044,5.27e-09,1;UBERON:0001736,5.27e-09,1;UBERON:0003293,5.27e-09,1;UBERON:0003294,5.27e-09,1;UBERON:0001829,5.27e-09,1;UBERON:0010047,5.27e-09,1;UBERON:0000167,5.27e-09,1;UBERON:0006298,5.27e-09,1;UBERON:0002371,1.82e-08,16;UBERON:0002390,2.11e-08,45;UBERON:0003061,2.11e-08,45;UBERON:0003887,9.99e-08,10|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0.68487187290202,0,0.171200729931206,0,0.999329285446988,1.61980213911861,0.699561878128147,8.3597473819933,6.58149281307546,8.91218268775863,0,0,0,1.11994695955385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87239121202077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9826457169473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0,0.565105371014073,1.36694227721025,2.0590035588587,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Fcrl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:229499 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R4Y0,uniprot:E9Q958,uniprot:E9Q5S9 | |||
|association_with_transcript=73bp_to_ENSMUST00000072480,ENSMUST00000163661,ENSMUST00000167200,NM_001136236,NM_153090,NM_178165,uc008psb.2,uc008psc.2,uc008psd.2_5end | |||
|cluster_id=chr3:87180382..87180387,+ | |||
|description=CAGE_peak_4_at_Fcrl1_5end | |||
|id=chr3:87180382..87180387,+ | |||
|ontology_enrichment_celltype=CL:0000553!5.78e-16!6;CL:0000556!5.78e-16!6;CL:0000050!2.29e-10!9;CL:0002031!1.32e-08!25;CL:0002027!1.71e-08!3;CL:0002006!1.71e-08!3;CL:0002024!1.71e-08!3;CL:0000414!2.49e-08!11;CL:0000988!1.52e-07!32;CL:0002032!1.52e-07!32;CL:0000037!1.52e-07!32;CL:0000566!1.52e-07!32;CL:0000837!1.52e-07!32;CL:0000839!6.37e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.03e-22,6;CL:0000556,5.03e-22,6;CL:0000050,8.11e-15,9;CL:0000839,2.34e-10,13;CL:0000945,2.09e-09,1;CL:0000236,2.09e-09,1;CL:0000826,2.09e-09,1;CL:0000763,1.82e-08,16;CL:0002031,3.43e-08,25;CL:0000049,3.63e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.25e-13!48;UBERON:0002390!1.32e-10!45;UBERON:0003061!1.32e-10!45;UBERON:0003887!1.47e-08!10;UBERON:0002405!1.48e-07!70;UBERON:0002106!2.80e-07!6;UBERON:0004457!2.80e-07!6;UBERON:0000042!2.80e-07!6;UBERON:0004854!2.80e-07!6;UBERON:0009034!2.80e-07!6;UBERON:0002095!2.80e-07!6;UBERON:0004782!2.80e-07!6;UBERON:0003281!2.80e-07!6;UBERON:0009664!2.80e-07!6;UBERON:0002296!2.80e-07!6;UBERON:0005602!2.80e-07!6;UBERON:0001179!2.80e-07!6;UBERON:0006293!2.80e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.82e-13,48;UBERON:0002405,5.82e-13,48;UBERON:0002106,1.73e-12,6;UBERON:0004457,1.73e-12,6;UBERON:0000042,1.73e-12,6;UBERON:0004854,1.73e-12,6;UBERON:0009034,1.73e-12,6;UBERON:0002095,1.73e-12,6;UBERON:0004782,1.73e-12,6;UBERON:0003281,1.73e-12,6;UBERON:0009664,1.73e-12,6;UBERON:0002296,1.73e-12,6;UBERON:0005602,1.73e-12,6;UBERON:0001179,1.73e-12,6;UBERON:0006293,1.73e-12,6;UBERON:0002465,1.21e-11,3;UBERON:0000029,9.82e-10,1;UBERON:0001097,9.82e-10,1;UBERON:0003968,9.82e-10,1;UBERON:0001467,9.82e-10,1;UBERON:0001044,5.27e-09,1;UBERON:0001736,5.27e-09,1;UBERON:0003293,5.27e-09,1;UBERON:0003294,5.27e-09,1;UBERON:0001829,5.27e-09,1;UBERON:0010047,5.27e-09,1;UBERON:0000167,5.27e-09,1;UBERON:0006298,5.27e-09,1;UBERON:0002371,1.82e-08,16;UBERON:0002390,2.11e-08,45;UBERON:0003061,2.11e-08,45;UBERON:0003887,9.99e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0.68487187290202,0,0.171200729931206,0,0.999329285446988,1.61980213911861,0.699561878128147,8.3597473819933,6.58149281307546,8.91218268775863,0,0,0,1.11994695955385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87239121202077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9826457169473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0,0.565105371014073,1.36694227721025,2.0590035588587,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Fcrl1 | |||
}} |
Revision as of 03:01, 4 August 2015
Short description: | p4@Fcrl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fcrl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 73bp_to_ENSMUST00000072480, ENSMUST00000163661, ENSMUST00000167200, NM_001136236, NM_153090, NM_178165, uc008psb.2, uc008psc.2, uc008psd.2_5end |
EntrezGene: | 229499 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.03e-22 | 6 |
megakaryocyte | 5.03e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 8.11e-15 | 9 |
myeloid lineage restricted progenitor cell | 2.34e-10 | 13 |
lymphocyte of B lineage | 2.09e-09 | 1 |
B cell | 2.09e-09 | 1 |
pro-B cell | 2.09e-09 | 1 |
myeloid cell | 1.82e-08 | 16 |
hematopoietic lineage restricted progenitor cell | 3.43e-08 | 25 |
common myeloid progenitor | 3.63e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.82e-13 | 48 |
immune system | 5.82e-13 | 48 |
spleen | 1.73e-12 | 6 |
cavity lining | 1.73e-12 | 6 |
serous membrane | 1.73e-12 | 6 |
gastrointestinal system mesentery | 1.73e-12 | 6 |
stomach region | 1.73e-12 | 6 |
mesentery | 1.73e-12 | 6 |
gastrointestinal system serosa | 1.73e-12 | 6 |
mesentery of stomach | 1.73e-12 | 6 |
gut mesentery | 1.73e-12 | 6 |
dorsal mesentery | 1.73e-12 | 6 |
dorsal mesogastrium | 1.73e-12 | 6 |
peritoneal cavity | 1.73e-12 | 6 |
spleen primordium | 1.73e-12 | 6 |
lymphoid system | 1.21e-11 | 3 |
lymph node | 9.82e-10 | 1 |
axillary lymph node | 9.82e-10 | 1 |
peripheral lymph node | 9.82e-10 | 1 |
shoulder | 9.82e-10 | 1 |
saliva-secreting gland | 5.27e-09 | 1 |
submandibular gland | 5.27e-09 | 1 |
gland of oral region | 5.27e-09 | 1 |
gland of foregut | 5.27e-09 | 1 |
major salivary gland | 5.27e-09 | 1 |
oral gland | 5.27e-09 | 1 |
oral cavity | 5.27e-09 | 1 |
submandibular gland primordium | 5.27e-09 | 1 |
bone marrow | 1.82e-08 | 16 |
hematopoietic system | 2.11e-08 | 45 |
blood island | 2.11e-08 | 45 |
intraembryonic coelom | 9.99e-08 | 10 |