FFCP PHASE1:Mm9::chr8:73279779..73279791,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:73279779..73279791,+|id=chr8:73279779..73279791,+|ontology_enrichment_celltype=CL:0000117!3.35e-14!23;CL:0000337!3.35e-14!23;CL:0000540!1.83e-11!33;CL:0000047!1.83e-11!33;CL:0000031!1.83e-11!33;CL:0000404!1.83e-11!33;CL:0000393!1.19e-09!39;CL:0000211!1.19e-09!39;CL:0000221!1.24e-09!44;CL:0000133!1.24e-09!44;CL:0002319!4.51e-09!43;CL:0000055!1.29e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-18,23;CL:0000337,1.45e-18,23;CL:0002614,1.13e-12,3;CL:0002610,1.93e-12,3;CL:0000540,2.22e-12,33;CL:0000047,2.22e-12,33;CL:0000031,2.22e-12,33;CL:0000404,2.22e-12,33;CL:0000393,3.44e-10,39;CL:0000211,3.44e-10,39;CL:0002319,4.55e-09,43;CL:0000221,8.06e-09,44;CL:0000133,8.06e-09,44;CL:0002611,2.71e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.42e-28!73;UBERON:0005743!1.42e-28!73;UBERON:0001049!2.17e-28!52;UBERON:0005068!2.17e-28!52;UBERON:0006241!2.17e-28!52;UBERON:0007135!2.17e-28!52;UBERON:0000073!2.30e-27!75;UBERON:0001016!2.30e-27!75;UBERON:0002020!5.27e-27!34;UBERON:0000955!2.39e-26!50;UBERON:0006238!2.39e-26!50;UBERON:0002616!1.62e-25!49;UBERON:0002346!2.82e-25!71;UBERON:0003075!2.82e-25!71;UBERON:0007284!2.82e-25!71;UBERON:0000033!5.12e-23!63;UBERON:0002791!1.71e-21!29;UBERON:0003528!1.71e-21!29;UBERON:0001893!1.71e-21!29;UBERON:0004121!1.87e-21!102;UBERON:0000924!1.87e-21!102;UBERON:0006601!1.87e-21!102;UBERON:0003080!1.93e-20!40;UBERON:0002780!1.54e-19!39;UBERON:0001890!1.54e-19!39;UBERON:0006240!1.54e-19!39;UBERON:0003056!2.60e-18!49;UBERON:0007811!3.63e-17!86;UBERON:0000956!8.54e-16!21;UBERON:0001869!8.54e-16!21;UBERON:0000203!8.54e-16!21;UBERON:0000153!1.86e-14!94;UBERON:0002021!4.88e-13!10;UBERON:0000411!4.88e-13!10;UBERON:0001950!4.88e-13!10;UBERON:0002619!2.76e-12!17;UBERON:0003076!2.15e-08!12;UBERON:0003057!2.15e-08!12;UBERON:0002240!1.47e-07!6;UBERON:0005174!1.47e-07!6;UBERON:0001137!1.47e-07!6;UBERON:0002298!1.91e-07!6;UBERON:0000025!4.39e-07!114;UBERON:0000064!6.82e-07!99;UBERON:0002420!7.57e-07!8;UBERON:0007245!7.57e-07!8;UBERON:0010009!7.57e-07!8;UBERON:0010011!7.57e-07!8;UBERON:0000454!7.57e-07!8;UBERON:0001948!8.62e-07!5;UBERON:0002315!8.62e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.22e-38,10;UBERON:0000411,1.22e-38,10;UBERON:0001950,1.22e-38,10;UBERON:0002020,1.64e-38,34;UBERON:0000073,5.15e-35,54;UBERON:0003528,3.78e-28,29;UBERON:0002791,3.78e-28,29;UBERON:0001893,3.78e-28,29;UBERON:0001049,7.57e-27,52;UBERON:0005068,7.57e-27,52;UBERON:0006241,7.57e-27,52;UBERON:0007135,7.57e-27,52;UBERON:0002619,1.76e-26,17;UBERON:0000956,4.56e-25,21;UBERON:0001869,4.56e-25,21;UBERON:0000203,4.56e-25,21;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0002780,4.09e-23,39;UBERON:0001890,4.09e-23,39;UBERON:0006240,4.09e-23,39;UBERON:0003080,1.82e-22,40;UBERON:0002346,3.40e-21,64;UBERON:0003075,3.40e-21,64;UBERON:0007284,3.40e-21,64;UBERON:0002616,3.65e-19,46;UBERON:0000955,1.07e-18,47;UBERON:0006238,1.07e-18,47;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0010371,3.60e-18,73;UBERON:0003056,8.15e-18,49;UBERON:0010314,1.03e-13,92;UBERON:0002038,1.13e-12,3;UBERON:0009663,1.13e-12,3;UBERON:0009661,1.13e-12,3;UBERON:0000125,1.13e-12,3;UBERON:0002308,1.13e-12,3;UBERON:0004684,1.93e-12,3;UBERON:0002275,1.93e-12,3;UBERON:0001948,2.71e-12,5;UBERON:0002315,2.71e-12,5;UBERON:0000025,2.13e-10,114;UBERON:0002240,2.84e-10,6;UBERON:0005174,2.84e-10,6;UBERON:0001137,2.84e-10,6;UBERON:0002950,1.27e-09,4;UBERON:0001891,1.27e-09,4;UBERON:0009616,1.27e-09,4;UBERON:0010286,1.27e-09,4;UBERON:0004111,1.74e-09,122;UBERON:0002256,2.71e-08,2;UBERON:0011216,3.78e-07,194|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0,0,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0,0.518448061542388,1.89008313664367,0.210324961351382,1.14260393761521,1.98781686856452,0,0.479227355091182,0,3.30347642998166,1.27687338085188,3.37934373163736,0.791317726381163,0.823388792421687,0,3.07101298901519,2.25105044012672,3.51435969886663,2.06240009831567,2.70506193518296,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,1.45451631191692,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,4.60325236507177,2.86447756719698,2.40594455281163,2.74033007908257,5.2877572817279,3.37511250115903,4.5032120322422,3.62513927187364,1.03552062350364,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.0574354689556133,0,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr8:73279779..73279791,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:73279779..73279791,+ | |||
|description=CAGE_peak_at_chr8:73279779..73279791,+ | |||
|id=chr8:73279779..73279791,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.35e-14!23;CL:0000337!3.35e-14!23;CL:0000540!1.83e-11!33;CL:0000047!1.83e-11!33;CL:0000031!1.83e-11!33;CL:0000404!1.83e-11!33;CL:0000393!1.19e-09!39;CL:0000211!1.19e-09!39;CL:0000221!1.24e-09!44;CL:0000133!1.24e-09!44;CL:0002319!4.51e-09!43;CL:0000055!1.29e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-18,23;CL:0000337,1.45e-18,23;CL:0002614,1.13e-12,3;CL:0002610,1.93e-12,3;CL:0000540,2.22e-12,33;CL:0000047,2.22e-12,33;CL:0000031,2.22e-12,33;CL:0000404,2.22e-12,33;CL:0000393,3.44e-10,39;CL:0000211,3.44e-10,39;CL:0002319,4.55e-09,43;CL:0000221,8.06e-09,44;CL:0000133,8.06e-09,44;CL:0002611,2.71e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.42e-28!73;UBERON:0005743!1.42e-28!73;UBERON:0001049!2.17e-28!52;UBERON:0005068!2.17e-28!52;UBERON:0006241!2.17e-28!52;UBERON:0007135!2.17e-28!52;UBERON:0000073!2.30e-27!75;UBERON:0001016!2.30e-27!75;UBERON:0002020!5.27e-27!34;UBERON:0000955!2.39e-26!50;UBERON:0006238!2.39e-26!50;UBERON:0002616!1.62e-25!49;UBERON:0002346!2.82e-25!71;UBERON:0003075!2.82e-25!71;UBERON:0007284!2.82e-25!71;UBERON:0000033!5.12e-23!63;UBERON:0002791!1.71e-21!29;UBERON:0003528!1.71e-21!29;UBERON:0001893!1.71e-21!29;UBERON:0004121!1.87e-21!102;UBERON:0000924!1.87e-21!102;UBERON:0006601!1.87e-21!102;UBERON:0003080!1.93e-20!40;UBERON:0002780!1.54e-19!39;UBERON:0001890!1.54e-19!39;UBERON:0006240!1.54e-19!39;UBERON:0003056!2.60e-18!49;UBERON:0007811!3.63e-17!86;UBERON:0000956!8.54e-16!21;UBERON:0001869!8.54e-16!21;UBERON:0000203!8.54e-16!21;UBERON:0000153!1.86e-14!94;UBERON:0002021!4.88e-13!10;UBERON:0000411!4.88e-13!10;UBERON:0001950!4.88e-13!10;UBERON:0002619!2.76e-12!17;UBERON:0003076!2.15e-08!12;UBERON:0003057!2.15e-08!12;UBERON:0002240!1.47e-07!6;UBERON:0005174!1.47e-07!6;UBERON:0001137!1.47e-07!6;UBERON:0002298!1.91e-07!6;UBERON:0000025!4.39e-07!114;UBERON:0000064!6.82e-07!99;UBERON:0002420!7.57e-07!8;UBERON:0007245!7.57e-07!8;UBERON:0010009!7.57e-07!8;UBERON:0010011!7.57e-07!8;UBERON:0000454!7.57e-07!8;UBERON:0001948!8.62e-07!5;UBERON:0002315!8.62e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.22e-38,10;UBERON:0000411,1.22e-38,10;UBERON:0001950,1.22e-38,10;UBERON:0002020,1.64e-38,34;UBERON:0000073,5.15e-35,54;UBERON:0003528,3.78e-28,29;UBERON:0002791,3.78e-28,29;UBERON:0001893,3.78e-28,29;UBERON:0001049,7.57e-27,52;UBERON:0005068,7.57e-27,52;UBERON:0006241,7.57e-27,52;UBERON:0007135,7.57e-27,52;UBERON:0002619,1.76e-26,17;UBERON:0000956,4.56e-25,21;UBERON:0001869,4.56e-25,21;UBERON:0000203,4.56e-25,21;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0002780,4.09e-23,39;UBERON:0001890,4.09e-23,39;UBERON:0006240,4.09e-23,39;UBERON:0003080,1.82e-22,40;UBERON:0002346,3.40e-21,64;UBERON:0003075,3.40e-21,64;UBERON:0007284,3.40e-21,64;UBERON:0002616,3.65e-19,46;UBERON:0000955,1.07e-18,47;UBERON:0006238,1.07e-18,47;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0010371,3.60e-18,73;UBERON:0003056,8.15e-18,49;UBERON:0010314,1.03e-13,92;UBERON:0002038,1.13e-12,3;UBERON:0009663,1.13e-12,3;UBERON:0009661,1.13e-12,3;UBERON:0000125,1.13e-12,3;UBERON:0002308,1.13e-12,3;UBERON:0004684,1.93e-12,3;UBERON:0002275,1.93e-12,3;UBERON:0001948,2.71e-12,5;UBERON:0002315,2.71e-12,5;UBERON:0000025,2.13e-10,114;UBERON:0002240,2.84e-10,6;UBERON:0005174,2.84e-10,6;UBERON:0001137,2.84e-10,6;UBERON:0002950,1.27e-09,4;UBERON:0001891,1.27e-09,4;UBERON:0009616,1.27e-09,4;UBERON:0010286,1.27e-09,4;UBERON:0004111,1.74e-09,122;UBERON:0002256,2.71e-08,2;UBERON:0011216,3.78e-07,194 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0,0,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0,0.518448061542388,1.89008313664367,0.210324961351382,1.14260393761521,1.98781686856452,0,0.479227355091182,0,3.30347642998166,1.27687338085188,3.37934373163736,0.791317726381163,0.823388792421687,0,3.07101298901519,2.25105044012672,3.51435969886663,2.06240009831567,2.70506193518296,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,1.45451631191692,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,4.60325236507177,2.86447756719698,2.40594455281163,2.74033007908257,5.2877572817279,3.37511250115903,4.5032120322422,3.62513927187364,1.03552062350364,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.0574354689556133,0,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr8:73279779..73279791,+ | |||
}} |
Latest revision as of 01:21, 4 August 2015
Short description: | p@chr8:73279779..73279791, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:73279779..73279791, + |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-18 | 23 |
neuron of the substantia nigra | 1.13e-12 | 3 |
raphe nuclei neuron | 1.93e-12 | 3 |
neuron | 2.22e-12 | 33 |
neuronal stem cell | 2.22e-12 | 33 |
neuroblast | 2.22e-12 | 33 |
electrically signaling cell | 2.22e-12 | 33 |
electrically responsive cell | 3.44e-10 | 39 |
electrically active cell | 3.44e-10 | 39 |
neural cell | 4.55e-09 | 43 |
ectodermal cell | 8.06e-09 | 44 |
neurectodermal cell | 8.06e-09 | 44 |
neuron of the dorsal spinal cord | 2.71e-08 | 2 |