FFCP PHASE1:Mm9::chr2:127159235..127159246,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=807|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:127159235..127159246,+|id=chr2:127159235..127159246,+|ontology_enrichment_celltype=CL:0000791!2.48e-29!9;CL:0000789!2.48e-29!9;CL:0002420!2.48e-29!9;CL:0002419!2.48e-29!9;CL:0000790!2.48e-29!9;CL:0000838!7.36e-27!12;CL:0000988!7.50e-27!32;CL:0002032!7.50e-27!32;CL:0000037!7.50e-27!32;CL:0000566!7.50e-27!32;CL:0000837!7.50e-27!32;CL:0000624!4.75e-26!8;CL:0000542!1.19e-24!13;CL:0000051!1.19e-24!13;CL:0000084!1.01e-23!11;CL:0000827!1.01e-23!11;CL:0002031!1.26e-23!25;CL:0000893!8.11e-20!6;CL:0002489!8.11e-20!6;CL:0000898!8.11e-20!6;CL:0000809!8.11e-20!6;CL:0000810!8.11e-20!6;CL:0000895!8.11e-20!6;CL:0000808!8.11e-20!6;CL:0000894!8.11e-20!6;CL:0000806!8.11e-20!6;CL:0000807!8.11e-20!6;CL:0000805!8.11e-20!6;CL:0002425!8.11e-20!6;CL:0002436!8.11e-20!6;CL:0002427!8.11e-20!6;CL:0002428!8.11e-20!6;CL:0002429!8.11e-20!6;CL:0002433!8.11e-20!6;CL:0002431!8.11e-20!6;CL:0002432!8.11e-20!6;CL:0000738!2.04e-18!17;CL:0002087!2.04e-18!17;CL:0002320!1.30e-17!46;CL:0000134!1.30e-17!46;CL:0000219!1.76e-14!54;CL:0000063!3.28e-11!66;CL:0000034!7.50e-10!97;CL:0000049!1.69e-07!19;CL:0000723!3.56e-07!91;CL:0000048!3.56e-07!91;CL:0000144!4.36e-07!121;CL:0000012!4.36e-07!121|ontology_enrichment_celltype_v019_2=CL:0000838,9.83e-40,12;CL:0000791,4.30e-39,9;CL:0000789,4.30e-39,9;CL:0002420,4.30e-39,9;CL:0002419,4.30e-39,9;CL:0000790,4.30e-39,9;CL:0000542,1.10e-36,13;CL:0000051,1.10e-36,13;CL:0000084,5.01e-32,11;CL:0000827,5.01e-32,11;CL:0000624,9.47e-31,8;CL:0000738,4.50e-28,17;CL:0002087,4.50e-28,17;CL:0000893,1.08e-26,6;CL:0002489,1.08e-26,6;CL:0000898,1.08e-26,6;CL:0000809,1.08e-26,6;CL:0000810,1.08e-26,6;CL:0000895,1.08e-26,6;CL:0000808,1.08e-26,6;CL:0000894,1.08e-26,6;CL:0000806,1.08e-26,6;CL:0000807,1.08e-26,6;CL:0000805,1.08e-26,6;CL:0002425,1.08e-26,6;CL:0002436,1.08e-26,6;CL:0002427,1.08e-26,6;CL:0002428,1.08e-26,6;CL:0002429,1.08e-26,6;CL:0002433,1.08e-26,6;CL:0002431,1.08e-26,6;CL:0002432,1.08e-26,6;CL:0000988,2.75e-19,32;CL:0002032,2.75e-19,32;CL:0000037,2.75e-19,32;CL:0000837,2.75e-19,32;CL:0002031,4.33e-19,25;CL:0002320,2.30e-13,46;CL:0000134,2.30e-13,46;CL:0000219,2.38e-11,54;CL:0000625,3.65e-11,1;CL:0000945,4.58e-11,1;CL:0000236,4.58e-11,1;CL:0000826,4.58e-11,1;CL:0000815,7.19e-11,1;CL:0000792,7.19e-11,1;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.30e-17!46;UBERON:0002390!3.28e-11!45;UBERON:0003061!3.28e-11!45;UBERON:0002193!2.45e-10!48;UBERON:0002370!4.91e-10!23;UBERON:0000974!4.91e-10!23;UBERON:0004807!4.91e-10!23;UBERON:0005058!4.91e-10!23;UBERON:0003351!4.91e-10!23;UBERON:0009113!4.91e-10!23;UBERON:0003295!4.91e-10!23;UBERON:0009722!4.91e-10!23;UBERON:0005562!4.91e-10!23;UBERON:0007690!4.91e-10!23;UBERON:0006562!1.49e-09!24;UBERON:0003408!1.49e-09!24;UBERON:0001557!1.49e-09!24;UBERON:0001042!1.49e-09!24;UBERON:0008814!1.49e-09!24;UBERON:0009145!1.49e-09!24;UBERON:0004177!2.16e-09!29;UBERON:0000072!2.51e-08!27;UBERON:0002405!2.64e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.30e-13,46;UBERON:0002370,2.98e-07,23;UBERON:0000974,2.98e-07,23;UBERON:0004807,2.98e-07,23;UBERON:0005058,2.98e-07,23;UBERON:0003351,2.98e-07,23;UBERON:0009113,2.98e-07,23;UBERON:0003295,2.98e-07,23;UBERON:0009722,2.98e-07,23;UBERON:0005562,2.98e-07,23;UBERON:0007690,2.98e-07,23;UBERON:0006562,5.83e-07,24;UBERON:0003408,5.83e-07,24;UBERON:0001557,5.83e-07,24;UBERON:0001042,5.83e-07,24;UBERON:0008814,5.83e-07,24;UBERON:0009145,5.83e-07,24|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,3.51971805379167,4.21316147379588,3.5955773327356,1.11681022593471,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0,1.35982743995084,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360586348559907,0,0.100966449948148,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:127159235..127159246,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=807 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:127159235..127159246,+ | |||
|description=CAGE_peak_at_chr2:127159235..127159246,+ | |||
|id=chr2:127159235..127159246,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.48e-29!9;CL:0000789!2.48e-29!9;CL:0002420!2.48e-29!9;CL:0002419!2.48e-29!9;CL:0000790!2.48e-29!9;CL:0000838!7.36e-27!12;CL:0000988!7.50e-27!32;CL:0002032!7.50e-27!32;CL:0000037!7.50e-27!32;CL:0000566!7.50e-27!32;CL:0000837!7.50e-27!32;CL:0000624!4.75e-26!8;CL:0000542!1.19e-24!13;CL:0000051!1.19e-24!13;CL:0000084!1.01e-23!11;CL:0000827!1.01e-23!11;CL:0002031!1.26e-23!25;CL:0000893!8.11e-20!6;CL:0002489!8.11e-20!6;CL:0000898!8.11e-20!6;CL:0000809!8.11e-20!6;CL:0000810!8.11e-20!6;CL:0000895!8.11e-20!6;CL:0000808!8.11e-20!6;CL:0000894!8.11e-20!6;CL:0000806!8.11e-20!6;CL:0000807!8.11e-20!6;CL:0000805!8.11e-20!6;CL:0002425!8.11e-20!6;CL:0002436!8.11e-20!6;CL:0002427!8.11e-20!6;CL:0002428!8.11e-20!6;CL:0002429!8.11e-20!6;CL:0002433!8.11e-20!6;CL:0002431!8.11e-20!6;CL:0002432!8.11e-20!6;CL:0000738!2.04e-18!17;CL:0002087!2.04e-18!17;CL:0002320!1.30e-17!46;CL:0000134!1.30e-17!46;CL:0000219!1.76e-14!54;CL:0000063!3.28e-11!66;CL:0000034!7.50e-10!97;CL:0000049!1.69e-07!19;CL:0000723!3.56e-07!91;CL:0000048!3.56e-07!91;CL:0000144!4.36e-07!121;CL:0000012!4.36e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.83e-40,12;CL:0000791,4.30e-39,9;CL:0000789,4.30e-39,9;CL:0002420,4.30e-39,9;CL:0002419,4.30e-39,9;CL:0000790,4.30e-39,9;CL:0000542,1.10e-36,13;CL:0000051,1.10e-36,13;CL:0000084,5.01e-32,11;CL:0000827,5.01e-32,11;CL:0000624,9.47e-31,8;CL:0000738,4.50e-28,17;CL:0002087,4.50e-28,17;CL:0000893,1.08e-26,6;CL:0002489,1.08e-26,6;CL:0000898,1.08e-26,6;CL:0000809,1.08e-26,6;CL:0000810,1.08e-26,6;CL:0000895,1.08e-26,6;CL:0000808,1.08e-26,6;CL:0000894,1.08e-26,6;CL:0000806,1.08e-26,6;CL:0000807,1.08e-26,6;CL:0000805,1.08e-26,6;CL:0002425,1.08e-26,6;CL:0002436,1.08e-26,6;CL:0002427,1.08e-26,6;CL:0002428,1.08e-26,6;CL:0002429,1.08e-26,6;CL:0002433,1.08e-26,6;CL:0002431,1.08e-26,6;CL:0002432,1.08e-26,6;CL:0000988,2.75e-19,32;CL:0002032,2.75e-19,32;CL:0000037,2.75e-19,32;CL:0000837,2.75e-19,32;CL:0002031,4.33e-19,25;CL:0002320,2.30e-13,46;CL:0000134,2.30e-13,46;CL:0000219,2.38e-11,54;CL:0000625,3.65e-11,1;CL:0000945,4.58e-11,1;CL:0000236,4.58e-11,1;CL:0000826,4.58e-11,1;CL:0000815,7.19e-11,1;CL:0000792,7.19e-11,1;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.30e-17!46;UBERON:0002390!3.28e-11!45;UBERON:0003061!3.28e-11!45;UBERON:0002193!2.45e-10!48;UBERON:0002370!4.91e-10!23;UBERON:0000974!4.91e-10!23;UBERON:0004807!4.91e-10!23;UBERON:0005058!4.91e-10!23;UBERON:0003351!4.91e-10!23;UBERON:0009113!4.91e-10!23;UBERON:0003295!4.91e-10!23;UBERON:0009722!4.91e-10!23;UBERON:0005562!4.91e-10!23;UBERON:0007690!4.91e-10!23;UBERON:0006562!1.49e-09!24;UBERON:0003408!1.49e-09!24;UBERON:0001557!1.49e-09!24;UBERON:0001042!1.49e-09!24;UBERON:0008814!1.49e-09!24;UBERON:0009145!1.49e-09!24;UBERON:0004177!2.16e-09!29;UBERON:0000072!2.51e-08!27;UBERON:0002405!2.64e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.30e-13,46;UBERON:0002370,2.98e-07,23;UBERON:0000974,2.98e-07,23;UBERON:0004807,2.98e-07,23;UBERON:0005058,2.98e-07,23;UBERON:0003351,2.98e-07,23;UBERON:0009113,2.98e-07,23;UBERON:0003295,2.98e-07,23;UBERON:0009722,2.98e-07,23;UBERON:0005562,2.98e-07,23;UBERON:0007690,2.98e-07,23;UBERON:0006562,5.83e-07,24;UBERON:0003408,5.83e-07,24;UBERON:0001557,5.83e-07,24;UBERON:0001042,5.83e-07,24;UBERON:0008814,5.83e-07,24;UBERON:0009145,5.83e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,3.51971805379167,4.21316147379588,3.5955773327356,1.11681022593471,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0,1.35982743995084,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360586348559907,0,0.100966449948148,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:127159235..127159246,+ | |||
}} |
Latest revision as of 23:43, 3 August 2015
Short description: | p@chr2:127159235..127159246, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:127159235..127159246, + |
Coexpression cluster: | MCL_coexpression_mm9:807 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.30e-13 | 46 |
thymus | 2.98e-07 | 23 |
neck | 2.98e-07 | 23 |
respiratory system epithelium | 2.98e-07 | 23 |
hemolymphoid system gland | 2.98e-07 | 23 |
pharyngeal epithelium | 2.98e-07 | 23 |
thymic region | 2.98e-07 | 23 |
pharyngeal gland | 2.98e-07 | 23 |
entire pharyngeal arch endoderm | 2.98e-07 | 23 |
thymus primordium | 2.98e-07 | 23 |
early pharyngeal endoderm | 2.98e-07 | 23 |
pharynx | 5.83e-07 | 24 |
gland of gut | 5.83e-07 | 24 |
upper respiratory tract | 5.83e-07 | 24 |
chordate pharynx | 5.83e-07 | 24 |
pharyngeal arch system | 5.83e-07 | 24 |
pharyngeal region of foregut | 5.83e-07 | 24 |