FFCP PHASE1:Mm9::chr19:36423777..36423809,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=433|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:36423777..36423809,-|id=chr19:36423777..36423809,-|ontology_enrichment_celltype=CL:0000063!6.90e-12!66;CL:0002563!1.78e-09!9;CL:0002251!1.78e-09!9;CL:0000066!1.50e-07!25;CL:0000144!2.40e-07!121;CL:0000012!2.40e-07!121;CL:0000239!2.80e-07!6;CL:0000677!2.80e-07!6;CL:0000212!2.80e-07!6;CL:0000584!2.80e-07!6;CL:0000988!5.34e-07!32;CL:0002032!5.34e-07!32;CL:0000037!5.34e-07!32;CL:0000566!5.34e-07!32;CL:0000837!5.34e-07!32|ontology_enrichment_celltype_v019_2=CL:0000239,1.49e-16,6;CL:0000677,1.49e-16,6;CL:0000584,1.49e-16,6;CL:0002563,2.74e-14,9;CL:0002251,2.74e-14,9;CL:0000075,4.26e-14,7;CL:0000066,2.59e-11,25;CL:0000988,2.43e-10,32;CL:0002032,2.43e-10,32;CL:0000037,2.43e-10,32;CL:0000837,2.43e-10,32;CL:0000682,7.16e-09,3;CL:0000034,3.26e-08,97;CL:0002076,3.49e-08,15;CL:0000838,8.14e-08,12;CL:0002320,1.02e-07,46;CL:0000134,1.02e-07,46;CL:0000223,1.09e-07,20;CL:0000791,1.23e-07,9;CL:0000789,1.23e-07,9;CL:0002420,1.23e-07,9;CL:0002419,1.23e-07,9;CL:0000790,1.23e-07,9;CL:0000542,3.65e-07,13;CL:0000051,3.65e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.43e-08,3;DOID:4045,2.43e-08,3|ontology_enrichment_uberon=UBERON:0000344!5.55e-13!15;UBERON:0001242!2.44e-11!13;UBERON:0000060!2.44e-11!13;UBERON:0001262!2.44e-11!13;UBERON:0004786!2.44e-11!13;UBERON:0003350!1.78e-09!9;UBERON:0004808!1.78e-09!9;UBERON:0001277!1.78e-09!9;UBERON:0000485!9.60e-09!11;UBERON:0004923!1.51e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.74e-14,9;UBERON:0004808,2.74e-14,9;UBERON:0001277,2.74e-14,9;UBERON:0000344,3.49e-13,15;UBERON:0001242,3.12e-12,13;UBERON:0001262,3.12e-12,13;UBERON:0004786,3.12e-12,13;UBERON:0000485,1.63e-11,11;UBERON:0002384,1.02e-07,46;UBERON:0004923,1.17e-07,24|phase1_expression=0.320297694209588,5.93258192986914,7.27998783023258,7.56160528267075,6.51164448930251,1.17515490338323,1.86890112476421,1.42035655785734,6.75785866328,7.0219357896598,0.171217968225505,0,0.513602189793617,0.524522414513984,0,0,0,0.157731082679119,0,0.84877930359606,0.340173160604279,0,0,0.799962113967033,3.21172993494038,5.16808767703518,3.87685796543167,2.80112602491656,0.190023419456374,1.00812051903972,0.221730510655305,0,0,0,0.577703239502549,0.997407872150954,1.22501613757421,2.09265815368454,3.1253413780952,2.09409497589519,0.588231488031014,0.683045484958446,0,0,0.304130793658544,0,0,0,0,0,0.139986421625363,0,3.02008690903925,3.62681071005672,4.03312558970957,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,4.0798280022465,0,0,0.448026887097336,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0.510914110417183,6.58983184782562,14.9975682748352,3.43089613097275,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,5.1469581422943,4.54661599032948,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0,0,0,0.304464949114599,0,0.63549621259146,0,0.32977250588296,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,8.66889992968662,15.3946597556024,8.29199842826543,0,0,0,0,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:36423777..36423809,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=433 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:36423777..36423809,- | |||
|description=CAGE_peak_at_chr19:36423777..36423809,- | |||
|id=chr19:36423777..36423809,- | |||
|ontology_enrichment_celltype=CL:0000063!6.90e-12!66;CL:0002563!1.78e-09!9;CL:0002251!1.78e-09!9;CL:0000066!1.50e-07!25;CL:0000144!2.40e-07!121;CL:0000012!2.40e-07!121;CL:0000239!2.80e-07!6;CL:0000677!2.80e-07!6;CL:0000212!2.80e-07!6;CL:0000584!2.80e-07!6;CL:0000988!5.34e-07!32;CL:0002032!5.34e-07!32;CL:0000037!5.34e-07!32;CL:0000566!5.34e-07!32;CL:0000837!5.34e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.49e-16,6;CL:0000677,1.49e-16,6;CL:0000584,1.49e-16,6;CL:0002563,2.74e-14,9;CL:0002251,2.74e-14,9;CL:0000075,4.26e-14,7;CL:0000066,2.59e-11,25;CL:0000988,2.43e-10,32;CL:0002032,2.43e-10,32;CL:0000037,2.43e-10,32;CL:0000837,2.43e-10,32;CL:0000682,7.16e-09,3;CL:0000034,3.26e-08,97;CL:0002076,3.49e-08,15;CL:0000838,8.14e-08,12;CL:0002320,1.02e-07,46;CL:0000134,1.02e-07,46;CL:0000223,1.09e-07,20;CL:0000791,1.23e-07,9;CL:0000789,1.23e-07,9;CL:0002420,1.23e-07,9;CL:0002419,1.23e-07,9;CL:0000790,1.23e-07,9;CL:0000542,3.65e-07,13;CL:0000051,3.65e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.43e-08,3;DOID:4045,2.43e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.55e-13!15;UBERON:0001242!2.44e-11!13;UBERON:0000060!2.44e-11!13;UBERON:0001262!2.44e-11!13;UBERON:0004786!2.44e-11!13;UBERON:0003350!1.78e-09!9;UBERON:0004808!1.78e-09!9;UBERON:0001277!1.78e-09!9;UBERON:0000485!9.60e-09!11;UBERON:0004923!1.51e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.74e-14,9;UBERON:0004808,2.74e-14,9;UBERON:0001277,2.74e-14,9;UBERON:0000344,3.49e-13,15;UBERON:0001242,3.12e-12,13;UBERON:0001262,3.12e-12,13;UBERON:0004786,3.12e-12,13;UBERON:0000485,1.63e-11,11;UBERON:0002384,1.02e-07,46;UBERON:0004923,1.17e-07,24 | |||
|phase1_expression=0.320297694209588,5.93258192986914,7.27998783023258,7.56160528267075,6.51164448930251,1.17515490338323,1.86890112476421,1.42035655785734,6.75785866328,7.0219357896598,0.171217968225505,0,0.513602189793617,0.524522414513984,0,0,0,0.157731082679119,0,0.84877930359606,0.340173160604279,0,0,0.799962113967033,3.21172993494038,5.16808767703518,3.87685796543167,2.80112602491656,0.190023419456374,1.00812051903972,0.221730510655305,0,0,0,0.577703239502549,0.997407872150954,1.22501613757421,2.09265815368454,3.1253413780952,2.09409497589519,0.588231488031014,0.683045484958446,0,0,0.304130793658544,0,0,0,0,0,0.139986421625363,0,3.02008690903925,3.62681071005672,4.03312558970957,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,4.0798280022465,0,0,0.448026887097336,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0.510914110417183,6.58983184782562,14.9975682748352,3.43089613097275,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,5.1469581422943,4.54661599032948,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0,0,0,0.304464949114599,0,0.63549621259146,0,0.32977250588296,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,8.66889992968662,15.3946597556024,8.29199842826543,0,0,0,0,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:36423777..36423809,- | |||
}} |
Latest revision as of 23:40, 3 August 2015
Short description: | p@chr19:36423777..36423809, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:36423777..36423809, - |
Coexpression cluster: | MCL_coexpression_mm9:433 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.49e-16 | 6 |
gut absorptive cell | 1.49e-16 | 6 |
enterocyte | 1.49e-16 | 6 |
intestinal epithelial cell | 2.74e-14 | 9 |
epithelial cell of alimentary canal | 2.74e-14 | 9 |
columnar/cuboidal epithelial cell | 4.26e-14 | 7 |
epithelial cell | 2.59e-11 | 25 |
hematopoietic cell | 2.43e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.43e-10 | 32 |
hematopoietic stem cell | 2.43e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.43e-10 | 32 |
M cell of gut | 7.16e-09 | 3 |
stem cell | 3.26e-08 | 97 |
endo-epithelial cell | 3.49e-08 | 15 |
lymphoid lineage restricted progenitor cell | 8.14e-08 | 12 |
connective tissue cell | 1.02e-07 | 46 |
mesenchymal cell | 1.02e-07 | 46 |
endodermal cell | 1.09e-07 | 20 |
mature alpha-beta T cell | 1.23e-07 | 9 |
alpha-beta T cell | 1.23e-07 | 9 |
immature T cell | 1.23e-07 | 9 |
mature T cell | 1.23e-07 | 9 |
immature alpha-beta T cell | 1.23e-07 | 9 |
lymphocyte | 3.65e-07 | 13 |
common lymphoid progenitor | 3.65e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.74e-14 | 9 |
gastrointestinal system epithelium | 2.74e-14 | 9 |
intestinal epithelium | 2.74e-14 | 9 |
mucosa | 3.49e-13 | 15 |
intestinal mucosa | 3.12e-12 | 13 |
wall of intestine | 3.12e-12 | 13 |
gastrointestinal system mucosa | 3.12e-12 | 13 |
simple columnar epithelium | 1.63e-11 | 11 |
connective tissue | 1.02e-07 | 46 |
organ component layer | 1.17e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.43e-08 | 3 |
muscle cancer | 2.43e-08 | 3 |