FFCP PHASE1:Mm9::chr8:59934799..59934815,+: Difference between revisions
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{{FFCP|EntrezGene=20284|HGNC=|MCL_coexpression_id=1202|UniProt=O88745,Q543T5|association_with_transcript=79bp_to_ENSMUST00000034023,NM_009136,uc009lst.1_5end|description=CAGE_peak_2_at_Scrg1_5end|id=chr8:59934799..59934815,+|ontology_enrichment_celltype=CL:0002319!5.06e-13!43;CL:0000221!2.29e-12!44;CL:0000133!2.29e-12!44;CL:0000055!1.20e-10!50;CL:0000117!1.71e-09!23;CL:0000337!1.71e-09!23;CL:0000540!1.69e-08!33;CL:0000047!1.69e-08!33;CL:0000031!1.69e-08!33;CL:0000404!1.69e-08!33;CL:0002453!3.62e-07!8;CL:0000393!5.22e-07!39;CL:0000211!5.22e-07!39|ontology_enrichment_celltype_v019_2=CL:0002453,8.44e-11,8;CL:0002319,7.22e-09,43;CL:0000221,1.60e-08,44;CL:0000133,1.60e-08,44;CL:0000128,2.71e-08,6;CL:0000126,2.71e-08,6;CL:0000127,2.71e-08,6;CL:0000333,3.32e-08,10;CL:0000095,3.32e-08,10;CL:0000243,3.32e-08,10;CL:0000123,3.32e-08,10;CL:0000125,3.32e-08,10;CL:0000030,3.32e-08,10;CL:0000339,3.32e-08,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.07e-27!73;UBERON:0005743!4.07e-27!73;UBERON:0000073!1.58e-26!75;UBERON:0001016!1.58e-26!75;UBERON:0004121!4.06e-24!102;UBERON:0000924!4.06e-24!102;UBERON:0006601!4.06e-24!102;UBERON:0001049!8.47e-22!52;UBERON:0005068!8.47e-22!52;UBERON:0006241!8.47e-22!52;UBERON:0007135!8.47e-22!52;UBERON:0000955!1.42e-20!50;UBERON:0006238!1.42e-20!50;UBERON:0002616!7.21e-20!49;UBERON:0002346!3.95e-19!71;UBERON:0003075!3.95e-19!71;UBERON:0007284!3.95e-19!71;UBERON:0002020!2.12e-18!34;UBERON:0002791!1.12e-15!29;UBERON:0003528!1.12e-15!29;UBERON:0001893!1.12e-15!29;UBERON:0000033!2.07e-15!63;UBERON:0003080!4.40e-14!40;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0000956!6.26e-12!21;UBERON:0001869!6.26e-12!21;UBERON:0000203!6.26e-12!21;UBERON:0003056!6.41e-12!49;UBERON:0002619!3.84e-11!17;UBERON:0003076!8.55e-09!12;UBERON:0003057!8.55e-09!12;UBERON:0000153!2.30e-08!94;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000025!2.12e-07!114;UBERON:0007811!8.71e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.38e-27,73;UBERON:0000073,2.08e-26,54;UBERON:0001016,3.22e-26,75;UBERON:0001049,5.95e-25,52;UBERON:0005068,5.95e-25,52;UBERON:0006241,5.95e-25,52;UBERON:0007135,5.95e-25,52;UBERON:0000955,2.45e-21,47;UBERON:0006238,2.45e-21,47;UBERON:0002020,1.80e-20,34;UBERON:0002616,2.58e-20,46;UBERON:0004121,2.03e-19,95;UBERON:0000924,2.03e-19,95;UBERON:0006601,2.03e-19,95;UBERON:0002346,5.24e-18,64;UBERON:0003075,5.24e-18,64;UBERON:0007284,5.24e-18,64;UBERON:0003528,3.99e-17,29;UBERON:0002791,3.99e-17,29;UBERON:0001893,3.99e-17,29;UBERON:0010371,3.75e-16,73;UBERON:0003080,2.13e-14,40;UBERON:0002780,1.36e-13,39;UBERON:0001890,1.36e-13,39;UBERON:0006240,1.36e-13,39;UBERON:0002619,9.68e-13,17;UBERON:0000956,1.76e-12,21;UBERON:0001869,1.76e-12,21;UBERON:0000203,1.76e-12,21;UBERON:0003076,2.54e-12,12;UBERON:0003057,2.54e-12,12;UBERON:0010314,5.91e-12,92;UBERON:0002021,1.20e-11,10;UBERON:0000411,1.20e-11,10;UBERON:0001950,1.20e-11,10;UBERON:0003056,2.64e-10,49;UBERON:0004733,3.61e-08,6;UBERON:0004732,3.61e-08,6;UBERON:0002028,3.61e-08,6;UBERON:0007277,3.61e-08,6;UBERON:0000025,1.54e-07,114;UBERON:0000026,2.31e-07,12;UBERON:0004708,2.31e-07,12;UBERON:0002101,2.31e-07,12;UBERON:0004357,2.31e-07,12;UBERON:0004347,2.31e-07,12;UBERON:0005732,2.31e-07,12;UBERON:0005733,2.31e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,22.456591107186,42.3994332677531,34.4140921361482,8.81914456239784,11.5002051491977,0,0,0,0.514518872071894,0,3.09403255366465,0.606949382578793,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,20.3728075152515,16.9056054341484,0.103689612308478,0.810035629990144,1.05162480675691,19.1386159550548,15.6816664075646,0.979926393719632,0.670918297127655,0.919218786610021,5.50579404996943,3.95830748064082,7.37311359629969,1.05509030184155,0.914876436024097,2.08365348222704,3.90856198601933,3.93933827022176,5.95913166329559,7.07108605136802,8.82704420954438,0.372798891650601,0,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.867426633830679,1.21786191324856,0.691846491768175,1.65794904607885,1.52865319276416,0,0,0.289198713839823,1.76922110389975,14.235482795372,5.52103796150984,10.1823803158397,0,14.3462590535658,15.9179497178226,0,0,0,0,7.04016005202667,16.0125210986519,4.52355667606312,13.210648334613,16.8772201838018,6.2336413367868,17.1975738851823,0.101839363850316,6.71797641294502,0,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0.374806898238915,0.258703370739016,0.215567992932842,0.378212160335639,1.05570674498369,5.2606975782618,3.61461423993277,6.61679116392116,8.0255033199098,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0.233530684734339,0,0,0,0,0,0,19.1363853193356,6.48299057989492,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0.678980343100753,0,0,0.238043640886014,0,0.630540576424764,0.44292937929755,0.318909537314974,0.81931657357869,3.28101465545202,1.01254341007058,0,0,0,0,7.38532713943843,24.8488775575471,0,1.00988370881749,0.315508219416257,0,0,1.91175038362042,0.445597348164788,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,11.5675673911851,0.141940085208269,0,0.488660878060728,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.532020700926821,0.535106452806212,0.329098041204242,0,0,0,0,1.15420377059036,0.968786560175433,1.14594557363496,0.596861720015682,0.820704498725306,0,20.9530591271876,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,15.1907328047368,11.4579102687879,16.1541991403066,8.90607275701835,12.0863023582352,6.75022500231806,9.00642406448441,9.06284817968409,3.10656187051092,0,0.399024873401031,0.682934423016537,2.67417388775123,0.838452650511929,1.2869045591501,1.33348036680969,1.64828045791115,1.28367683836726,0.505394423527595,1.01391719956096,0.943131706930381,0.842773567228942,0.576226371643824,0.804096565378586,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.872078499793971,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.394017929502254,1.22769312950907,0.309873682371932,3.85813221962283,1.24905288968973,2.10538447600868,3.00819475667618,10.3295699317175,9.9266138603782,9.27471342481686|short_description=p2@Scrg1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20284 | |||
|HGNC= | |||
|MCL_coexpression_id=1202 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88745,uniprot:Q543T5 | |||
|association_with_transcript=79bp_to_ENSMUST00000034023,NM_009136,uc009lst.1_5end | |||
|cluster_id=chr8:59934799..59934815,+ | |||
|description=CAGE_peak_2_at_Scrg1_5end | |||
|id=chr8:59934799..59934815,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.06e-13!43;CL:0000221!2.29e-12!44;CL:0000133!2.29e-12!44;CL:0000055!1.20e-10!50;CL:0000117!1.71e-09!23;CL:0000337!1.71e-09!23;CL:0000540!1.69e-08!33;CL:0000047!1.69e-08!33;CL:0000031!1.69e-08!33;CL:0000404!1.69e-08!33;CL:0002453!3.62e-07!8;CL:0000393!5.22e-07!39;CL:0000211!5.22e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,8.44e-11,8;CL:0002319,7.22e-09,43;CL:0000221,1.60e-08,44;CL:0000133,1.60e-08,44;CL:0000128,2.71e-08,6;CL:0000126,2.71e-08,6;CL:0000127,2.71e-08,6;CL:0000333,3.32e-08,10;CL:0000095,3.32e-08,10;CL:0000243,3.32e-08,10;CL:0000123,3.32e-08,10;CL:0000125,3.32e-08,10;CL:0000030,3.32e-08,10;CL:0000339,3.32e-08,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.07e-27!73;UBERON:0005743!4.07e-27!73;UBERON:0000073!1.58e-26!75;UBERON:0001016!1.58e-26!75;UBERON:0004121!4.06e-24!102;UBERON:0000924!4.06e-24!102;UBERON:0006601!4.06e-24!102;UBERON:0001049!8.47e-22!52;UBERON:0005068!8.47e-22!52;UBERON:0006241!8.47e-22!52;UBERON:0007135!8.47e-22!52;UBERON:0000955!1.42e-20!50;UBERON:0006238!1.42e-20!50;UBERON:0002616!7.21e-20!49;UBERON:0002346!3.95e-19!71;UBERON:0003075!3.95e-19!71;UBERON:0007284!3.95e-19!71;UBERON:0002020!2.12e-18!34;UBERON:0002791!1.12e-15!29;UBERON:0003528!1.12e-15!29;UBERON:0001893!1.12e-15!29;UBERON:0000033!2.07e-15!63;UBERON:0003080!4.40e-14!40;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0000956!6.26e-12!21;UBERON:0001869!6.26e-12!21;UBERON:0000203!6.26e-12!21;UBERON:0003056!6.41e-12!49;UBERON:0002619!3.84e-11!17;UBERON:0003076!8.55e-09!12;UBERON:0003057!8.55e-09!12;UBERON:0000153!2.30e-08!94;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000025!2.12e-07!114;UBERON:0007811!8.71e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.38e-27,73;UBERON:0000073,2.08e-26,54;UBERON:0001016,3.22e-26,75;UBERON:0001049,5.95e-25,52;UBERON:0005068,5.95e-25,52;UBERON:0006241,5.95e-25,52;UBERON:0007135,5.95e-25,52;UBERON:0000955,2.45e-21,47;UBERON:0006238,2.45e-21,47;UBERON:0002020,1.80e-20,34;UBERON:0002616,2.58e-20,46;UBERON:0004121,2.03e-19,95;UBERON:0000924,2.03e-19,95;UBERON:0006601,2.03e-19,95;UBERON:0002346,5.24e-18,64;UBERON:0003075,5.24e-18,64;UBERON:0007284,5.24e-18,64;UBERON:0003528,3.99e-17,29;UBERON:0002791,3.99e-17,29;UBERON:0001893,3.99e-17,29;UBERON:0010371,3.75e-16,73;UBERON:0003080,2.13e-14,40;UBERON:0002780,1.36e-13,39;UBERON:0001890,1.36e-13,39;UBERON:0006240,1.36e-13,39;UBERON:0002619,9.68e-13,17;UBERON:0000956,1.76e-12,21;UBERON:0001869,1.76e-12,21;UBERON:0000203,1.76e-12,21;UBERON:0003076,2.54e-12,12;UBERON:0003057,2.54e-12,12;UBERON:0010314,5.91e-12,92;UBERON:0002021,1.20e-11,10;UBERON:0000411,1.20e-11,10;UBERON:0001950,1.20e-11,10;UBERON:0003056,2.64e-10,49;UBERON:0004733,3.61e-08,6;UBERON:0004732,3.61e-08,6;UBERON:0002028,3.61e-08,6;UBERON:0007277,3.61e-08,6;UBERON:0000025,1.54e-07,114;UBERON:0000026,2.31e-07,12;UBERON:0004708,2.31e-07,12;UBERON:0002101,2.31e-07,12;UBERON:0004357,2.31e-07,12;UBERON:0004347,2.31e-07,12;UBERON:0005732,2.31e-07,12;UBERON:0005733,2.31e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,22.456591107186,42.3994332677531,34.4140921361482,8.81914456239784,11.5002051491977,0,0,0,0.514518872071894,0,3.09403255366465,0.606949382578793,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,20.3728075152515,16.9056054341484,0.103689612308478,0.810035629990144,1.05162480675691,19.1386159550548,15.6816664075646,0.979926393719632,0.670918297127655,0.919218786610021,5.50579404996943,3.95830748064082,7.37311359629969,1.05509030184155,0.914876436024097,2.08365348222704,3.90856198601933,3.93933827022176,5.95913166329559,7.07108605136802,8.82704420954438,0.372798891650601,0,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.867426633830679,1.21786191324856,0.691846491768175,1.65794904607885,1.52865319276416,0,0,0.289198713839823,1.76922110389975,14.235482795372,5.52103796150984,10.1823803158397,0,14.3462590535658,15.9179497178226,0,0,0,0,7.04016005202667,16.0125210986519,4.52355667606312,13.210648334613,16.8772201838018,6.2336413367868,17.1975738851823,0.101839363850316,6.71797641294502,0,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0.374806898238915,0.258703370739016,0.215567992932842,0.378212160335639,1.05570674498369,5.2606975782618,3.61461423993277,6.61679116392116,8.0255033199098,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0.233530684734339,0,0,0,0,0,0,19.1363853193356,6.48299057989492,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0.678980343100753,0,0,0.238043640886014,0,0.630540576424764,0.44292937929755,0.318909537314974,0.81931657357869,3.28101465545202,1.01254341007058,0,0,0,0,7.38532713943843,24.8488775575471,0,1.00988370881749,0.315508219416257,0,0,1.91175038362042,0.445597348164788,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,11.5675673911851,0.141940085208269,0,0.488660878060728,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.532020700926821,0.535106452806212,0.329098041204242,0,0,0,0,1.15420377059036,0.968786560175433,1.14594557363496,0.596861720015682,0.820704498725306,0,20.9530591271876,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,15.1907328047368,11.4579102687879,16.1541991403066,8.90607275701835,12.0863023582352,6.75022500231806,9.00642406448441,9.06284817968409,3.10656187051092,0,0.399024873401031,0.682934423016537,2.67417388775123,0.838452650511929,1.2869045591501,1.33348036680969,1.64828045791115,1.28367683836726,0.505394423527595,1.01391719956096,0.943131706930381,0.842773567228942,0.576226371643824,0.804096565378586,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.872078499793971,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.394017929502254,1.22769312950907,0.309873682371932,3.85813221962283,1.24905288968973,2.10538447600868,3.00819475667618,10.3295699317175,9.9266138603782,9.27471342481686 | |||
|short_description=p2@Scrg1 | |||
}} |
Revision as of 22:22, 3 August 2015
Short description: | p2@Scrg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scrg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1202 |
Association with transcript: | 79bp_to_ENSMUST00000034023, NM_009136, uc009lst.1_5end |
EntrezGene: | 20284 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 8.44e-11 | 8 |
neural cell | 7.22e-09 | 43 |
ectodermal cell | 1.60e-08 | 44 |
neurectodermal cell | 1.60e-08 | 44 |
oligodendrocyte | 2.71e-08 | 6 |
macroglial cell | 2.71e-08 | 6 |
astrocyte | 2.71e-08 | 6 |
migratory neural crest cell | 3.32e-08 | 10 |
neuron associated cell | 3.32e-08 | 10 |
glial cell (sensu Vertebrata) | 3.32e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.32e-08 | 10 |
glial cell | 3.32e-08 | 10 |
glioblast | 3.32e-08 | 10 |
glioblast (sensu Vertebrata) | 3.32e-08 | 10 |