FFCP PHASE1:Mm9::chr5:137542830..137542841,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=214|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:137542830..137542841,-|id=chr5:137542830..137542841,-|ontology_enrichment_celltype=CL:0000680!1.43e-15!6;CL:0000183!1.43e-15!6;CL:0000187!1.43e-15!6;CL:0000056!1.43e-15!6;CL:0000222!3.06e-13!7;CL:0000355!3.96e-10!9;CL:0002494!2.80e-09!3;CL:0000737!2.80e-09!3;CL:0000746!2.80e-09!3;CL:0000513!2.80e-09!3;CL:0000349!7.74e-09!3;CL:0000351!7.74e-09!3;CL:0000192!6.06e-08!3;CL:0000359!6.06e-08!3;CL:0002539!6.06e-08!3;CL:0000514!6.06e-08!3|ontology_enrichment_celltype_v019_2=CL:0002494,7.89e-34,3;CL:0000737,7.89e-34,3;CL:0000746,7.89e-34,3;CL:0000513,7.89e-34,3;CL:0000680,2.49e-17,6;CL:0000187,2.49e-17,6;CL:0000056,2.49e-17,6;CL:0000349,3.36e-15,3;CL:0000351,3.36e-15,3;CL:0000222,5.81e-15,7;CL:0000355,8.55e-12,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!3.96e-10!9;UBERON:0002036!3.96e-10!9;UBERON:0002385!3.96e-10!9;UBERON:0000486!3.96e-10!9;UBERON:0001015!3.96e-10!9;UBERON:0004290!3.96e-10!9;UBERON:0003082!3.96e-10!9;UBERON:0000947!4.52e-10!4;UBERON:0001637!4.52e-10!4;UBERON:0003509!4.52e-10!4;UBERON:0004573!4.52e-10!4;UBERON:0004571!4.52e-10!4;UBERON:0010191!4.52e-10!4;UBERON:0004572!4.52e-10!4;UBERON:0000383!4.87e-09!10;UBERON:0000358!7.74e-09!3;UBERON:0000307!7.74e-09!3;UBERON:0005631!1.17e-08!3;UBERON:0000478!1.17e-08!3;UBERON:0000158!1.17e-08!3;UBERON:0002329!3.80e-08!11;UBERON:0003077!3.80e-08!11;UBERON:0003059!3.80e-08!11;UBERON:0007282!3.80e-08!11;UBERON:0009618!3.80e-08!11;UBERON:0007285!3.80e-08!11;UBERON:0000055!4.64e-08!5;UBERON:0001981!4.64e-08!5;UBERON:0002049!4.64e-08!5;UBERON:0007500!4.64e-08!5;UBERON:0007798!4.64e-08!5;UBERON:0004537!4.64e-08!5;UBERON:0006965!4.64e-08!5;UBERON:0001135!6.06e-08!3;UBERON:0004237!6.06e-08!3;UBERON:0004695!6.06e-08!3;UBERON:0002111!6.06e-08!3;UBERON:0004178!6.06e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.40e-22,2;UBERON:0003124,1.40e-22,2;UBERON:0004340,1.40e-22,2;UBERON:0005631,2.04e-15,3;UBERON:0000478,2.04e-15,3;UBERON:0000158,2.04e-15,3;UBERON:0000358,3.36e-15,3;UBERON:0000307,3.36e-15,3;UBERON:0007010,3.36e-15,3;UBERON:0005795,8.11e-12,4;UBERON:0000995,8.11e-12,4;UBERON:0001134,8.55e-12,9;UBERON:0002036,8.55e-12,9;UBERON:0002385,8.55e-12,9;UBERON:0000486,8.55e-12,9;UBERON:0007503,8.55e-12,9;UBERON:0001015,8.55e-12,9;UBERON:0002329,8.55e-12,9;UBERON:0003082,8.55e-12,9;UBERON:0003059,8.55e-12,9;UBERON:0007282,8.55e-12,9;UBERON:0004290,8.55e-12,9;UBERON:0009618,8.55e-12,9;UBERON:0000383,1.11e-10,10;UBERON:0007524,9.05e-10,11;UBERON:0003077,9.05e-10,11;UBERON:0007285,9.05e-10,11;UBERON:0003975,1.20e-09,5;UBERON:0004872,1.46e-08,33|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0.878744730937887,0.972149495371417,0,0,0,0,0,12.0911934936895,2.29226751951005,3.09403255366465,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,5.439770669662,0,0,0,0,0,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,2.33015277950202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,1.10992976687032,0.717710852875806,2.01461539636894,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr5:137542830..137542841,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:137542830..137542841,- | |||
|description=CAGE_peak_at_chr5:137542830..137542841,- | |||
|id=chr5:137542830..137542841,- | |||
|ontology_enrichment_celltype=CL:0000680!1.43e-15!6;CL:0000183!1.43e-15!6;CL:0000187!1.43e-15!6;CL:0000056!1.43e-15!6;CL:0000222!3.06e-13!7;CL:0000355!3.96e-10!9;CL:0002494!2.80e-09!3;CL:0000737!2.80e-09!3;CL:0000746!2.80e-09!3;CL:0000513!2.80e-09!3;CL:0000349!7.74e-09!3;CL:0000351!7.74e-09!3;CL:0000192!6.06e-08!3;CL:0000359!6.06e-08!3;CL:0002539!6.06e-08!3;CL:0000514!6.06e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,7.89e-34,3;CL:0000737,7.89e-34,3;CL:0000746,7.89e-34,3;CL:0000513,7.89e-34,3;CL:0000680,2.49e-17,6;CL:0000187,2.49e-17,6;CL:0000056,2.49e-17,6;CL:0000349,3.36e-15,3;CL:0000351,3.36e-15,3;CL:0000222,5.81e-15,7;CL:0000355,8.55e-12,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.96e-10!9;UBERON:0002036!3.96e-10!9;UBERON:0002385!3.96e-10!9;UBERON:0000486!3.96e-10!9;UBERON:0001015!3.96e-10!9;UBERON:0004290!3.96e-10!9;UBERON:0003082!3.96e-10!9;UBERON:0000947!4.52e-10!4;UBERON:0001637!4.52e-10!4;UBERON:0003509!4.52e-10!4;UBERON:0004573!4.52e-10!4;UBERON:0004571!4.52e-10!4;UBERON:0010191!4.52e-10!4;UBERON:0004572!4.52e-10!4;UBERON:0000383!4.87e-09!10;UBERON:0000358!7.74e-09!3;UBERON:0000307!7.74e-09!3;UBERON:0005631!1.17e-08!3;UBERON:0000478!1.17e-08!3;UBERON:0000158!1.17e-08!3;UBERON:0002329!3.80e-08!11;UBERON:0003077!3.80e-08!11;UBERON:0003059!3.80e-08!11;UBERON:0007282!3.80e-08!11;UBERON:0009618!3.80e-08!11;UBERON:0007285!3.80e-08!11;UBERON:0000055!4.64e-08!5;UBERON:0001981!4.64e-08!5;UBERON:0002049!4.64e-08!5;UBERON:0007500!4.64e-08!5;UBERON:0007798!4.64e-08!5;UBERON:0004537!4.64e-08!5;UBERON:0006965!4.64e-08!5;UBERON:0001135!6.06e-08!3;UBERON:0004237!6.06e-08!3;UBERON:0004695!6.06e-08!3;UBERON:0002111!6.06e-08!3;UBERON:0004178!6.06e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.40e-22,2;UBERON:0003124,1.40e-22,2;UBERON:0004340,1.40e-22,2;UBERON:0005631,2.04e-15,3;UBERON:0000478,2.04e-15,3;UBERON:0000158,2.04e-15,3;UBERON:0000358,3.36e-15,3;UBERON:0000307,3.36e-15,3;UBERON:0007010,3.36e-15,3;UBERON:0005795,8.11e-12,4;UBERON:0000995,8.11e-12,4;UBERON:0001134,8.55e-12,9;UBERON:0002036,8.55e-12,9;UBERON:0002385,8.55e-12,9;UBERON:0000486,8.55e-12,9;UBERON:0007503,8.55e-12,9;UBERON:0001015,8.55e-12,9;UBERON:0002329,8.55e-12,9;UBERON:0003082,8.55e-12,9;UBERON:0003059,8.55e-12,9;UBERON:0007282,8.55e-12,9;UBERON:0004290,8.55e-12,9;UBERON:0009618,8.55e-12,9;UBERON:0000383,1.11e-10,10;UBERON:0007524,9.05e-10,11;UBERON:0003077,9.05e-10,11;UBERON:0007285,9.05e-10,11;UBERON:0003975,1.20e-09,5;UBERON:0004872,1.46e-08,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0.878744730937887,0.972149495371417,0,0,0,0,0,12.0911934936895,2.29226751951005,3.09403255366465,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,5.439770669662,0,0,0,0,0,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,2.33015277950202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,1.10992976687032,0.717710852875806,2.01461539636894,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr5:137542830..137542841,- | |||
}} |
Latest revision as of 20:55, 3 August 2015
Short description: | p@chr5:137542830..137542841, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137542830..137542841, - |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 7.89e-34 | 3 |
striated muscle cell | 7.89e-34 | 3 |
cardiac muscle cell | 7.89e-34 | 3 |
cardiac muscle myoblast | 7.89e-34 | 3 |
muscle precursor cell | 2.49e-17 | 6 |
muscle cell | 2.49e-17 | 6 |
myoblast | 2.49e-17 | 6 |
extraembryonic cell | 3.36e-15 | 3 |
trophoblast cell | 3.36e-15 | 3 |
mesodermal cell | 5.81e-15 | 7 |
multi-potent skeletal muscle stem cell | 8.55e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.40e-22 | 2 |
chorion | 1.40e-22 | 2 |
allantois | 1.40e-22 | 2 |
extraembryonic membrane | 2.04e-15 | 3 |
extraembryonic structure | 2.04e-15 | 3 |
membranous layer | 2.04e-15 | 3 |
blastocyst | 3.36e-15 | 3 |
blastula | 3.36e-15 | 3 |
cleaving embryo | 3.36e-15 | 3 |
embryonic uterus | 8.11e-12 | 4 |
uterus | 8.11e-12 | 4 |
skeletal muscle tissue | 8.55e-12 | 9 |
striated muscle tissue | 8.55e-12 | 9 |
muscle tissue | 8.55e-12 | 9 |
multilaminar epithelium | 8.55e-12 | 9 |
epithelial vesicle | 8.55e-12 | 9 |
musculature | 8.55e-12 | 9 |
somite | 8.55e-12 | 9 |
myotome | 8.55e-12 | 9 |
presomitic mesoderm | 8.55e-12 | 9 |
presumptive segmental plate | 8.55e-12 | 9 |
dermomyotome | 8.55e-12 | 9 |
trunk paraxial mesoderm | 8.55e-12 | 9 |
musculature of body | 1.11e-10 | 10 |
dense mesenchyme tissue | 9.05e-10 | 11 |
paraxial mesoderm | 9.05e-10 | 11 |
presumptive paraxial mesoderm | 9.05e-10 | 11 |
internal female genitalia | 1.20e-09 | 5 |
splanchnic layer of lateral plate mesoderm | 1.46e-08 | 33 |