FFCP PHASE1:Mm9::chr5:137538929..137538952,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=214|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:137538929..137538952,-|id=chr5:137538929..137538952,-|ontology_enrichment_celltype=CL:0000680!9.45e-13!6;CL:0000183!9.45e-13!6;CL:0000187!9.45e-13!6;CL:0000056!9.45e-13!6;CL:0000222!8.52e-11!7;CL:0000355!3.43e-08!9;CL:0002494!1.09e-07!3;CL:0000737!1.09e-07!3;CL:0000746!1.09e-07!3;CL:0000513!1.09e-07!3;CL:0000349!2.69e-07!3;CL:0000351!2.69e-07!3;CL:0002092!6.47e-07!3;CL:0002540!6.47e-07!3;CL:0000333!9.66e-07!10;CL:0000095!9.66e-07!10;CL:0000243!9.66e-07!10;CL:0000123!9.66e-07!10;CL:0000125!9.66e-07!10;CL:0000030!9.66e-07!10;CL:0000339!9.66e-07!10|ontology_enrichment_celltype_v019_2=CL:0002494,9.43e-22,3;CL:0000737,9.43e-22,3;CL:0000746,9.43e-22,3;CL:0000513,9.43e-22,3;CL:0000349,1.85e-20,3;CL:0000351,1.85e-20,3;CL:0002605,1.96e-14,2;CL:0002604,1.96e-14,2;CL:0000680,3.46e-11,6;CL:0000187,3.46e-11,6;CL:0000056,3.46e-11,6;CL:0000222,1.15e-09,7;CL:0000355,1.24e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!3.43e-08!9;UBERON:0002036!3.43e-08!9;UBERON:0002385!3.43e-08!9;UBERON:0000486!3.43e-08!9;UBERON:0001015!3.43e-08!9;UBERON:0004290!3.43e-08!9;UBERON:0003082!3.43e-08!9;UBERON:0000947!5.52e-08!4;UBERON:0001637!5.52e-08!4;UBERON:0003509!5.52e-08!4;UBERON:0004573!5.52e-08!4;UBERON:0004571!5.52e-08!4;UBERON:0010191!5.52e-08!4;UBERON:0004572!5.52e-08!4;UBERON:0000358!2.69e-07!3;UBERON:0000307!2.69e-07!3;UBERON:0000383!2.79e-07!10;UBERON:0005631!4.28e-07!3;UBERON:0000478!4.28e-07!3;UBERON:0000158!4.28e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.85e-20,3;UBERON:0000307,1.85e-20,3;UBERON:0007010,1.85e-20,3;UBERON:0001987,1.23e-14,2;UBERON:0003124,1.23e-14,2;UBERON:0004340,1.23e-14,2;UBERON:0005631,4.52e-10,3;UBERON:0000478,4.52e-10,3;UBERON:0000158,4.52e-10,3;UBERON:0005795,9.02e-08,4;UBERON:0000995,9.02e-08,4;UBERON:0001134,1.24e-07,9;UBERON:0002036,1.24e-07,9;UBERON:0002385,1.24e-07,9;UBERON:0000486,1.24e-07,9;UBERON:0007503,1.24e-07,9;UBERON:0001015,1.24e-07,9;UBERON:0002329,1.24e-07,9;UBERON:0003082,1.24e-07,9;UBERON:0003059,1.24e-07,9;UBERON:0007282,1.24e-07,9;UBERON:0004290,1.24e-07,9;UBERON:0009618,1.24e-07,9;UBERON:0000383,6.46e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.912392380975631,0.550640256485045,0.782391344348039,0.218025156380447,1.09843091367236,3.88859798148567,0,0,0,0,0,25.4686841675588,2.29226751951005,10.3134418455488,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28734528666413,0.0755715601067855,0,0,3.39985666853875,0,0,0,0,0,0.519572009205738,0,0,0,0,0,0.649473123033642,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16902343164525,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,2.75381692122966,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.16628013592318,2.68615386182526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:137538929..137538952,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:137538929..137538952,- | |||
|description=CAGE_peak_at_chr5:137538929..137538952,- | |||
|id=chr5:137538929..137538952,- | |||
|ontology_enrichment_celltype=CL:0000680!9.45e-13!6;CL:0000183!9.45e-13!6;CL:0000187!9.45e-13!6;CL:0000056!9.45e-13!6;CL:0000222!8.52e-11!7;CL:0000355!3.43e-08!9;CL:0002494!1.09e-07!3;CL:0000737!1.09e-07!3;CL:0000746!1.09e-07!3;CL:0000513!1.09e-07!3;CL:0000349!2.69e-07!3;CL:0000351!2.69e-07!3;CL:0002092!6.47e-07!3;CL:0002540!6.47e-07!3;CL:0000333!9.66e-07!10;CL:0000095!9.66e-07!10;CL:0000243!9.66e-07!10;CL:0000123!9.66e-07!10;CL:0000125!9.66e-07!10;CL:0000030!9.66e-07!10;CL:0000339!9.66e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,9.43e-22,3;CL:0000737,9.43e-22,3;CL:0000746,9.43e-22,3;CL:0000513,9.43e-22,3;CL:0000349,1.85e-20,3;CL:0000351,1.85e-20,3;CL:0002605,1.96e-14,2;CL:0002604,1.96e-14,2;CL:0000680,3.46e-11,6;CL:0000187,3.46e-11,6;CL:0000056,3.46e-11,6;CL:0000222,1.15e-09,7;CL:0000355,1.24e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.43e-08!9;UBERON:0002036!3.43e-08!9;UBERON:0002385!3.43e-08!9;UBERON:0000486!3.43e-08!9;UBERON:0001015!3.43e-08!9;UBERON:0004290!3.43e-08!9;UBERON:0003082!3.43e-08!9;UBERON:0000947!5.52e-08!4;UBERON:0001637!5.52e-08!4;UBERON:0003509!5.52e-08!4;UBERON:0004573!5.52e-08!4;UBERON:0004571!5.52e-08!4;UBERON:0010191!5.52e-08!4;UBERON:0004572!5.52e-08!4;UBERON:0000358!2.69e-07!3;UBERON:0000307!2.69e-07!3;UBERON:0000383!2.79e-07!10;UBERON:0005631!4.28e-07!3;UBERON:0000478!4.28e-07!3;UBERON:0000158!4.28e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.85e-20,3;UBERON:0000307,1.85e-20,3;UBERON:0007010,1.85e-20,3;UBERON:0001987,1.23e-14,2;UBERON:0003124,1.23e-14,2;UBERON:0004340,1.23e-14,2;UBERON:0005631,4.52e-10,3;UBERON:0000478,4.52e-10,3;UBERON:0000158,4.52e-10,3;UBERON:0005795,9.02e-08,4;UBERON:0000995,9.02e-08,4;UBERON:0001134,1.24e-07,9;UBERON:0002036,1.24e-07,9;UBERON:0002385,1.24e-07,9;UBERON:0000486,1.24e-07,9;UBERON:0007503,1.24e-07,9;UBERON:0001015,1.24e-07,9;UBERON:0002329,1.24e-07,9;UBERON:0003082,1.24e-07,9;UBERON:0003059,1.24e-07,9;UBERON:0007282,1.24e-07,9;UBERON:0004290,1.24e-07,9;UBERON:0009618,1.24e-07,9;UBERON:0000383,6.46e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.912392380975631,0.550640256485045,0.782391344348039,0.218025156380447,1.09843091367236,3.88859798148567,0,0,0,0,0,25.4686841675588,2.29226751951005,10.3134418455488,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28734528666413,0.0755715601067855,0,0,3.39985666853875,0,0,0,0,0,0.519572009205738,0,0,0,0,0,0.649473123033642,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16902343164525,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,2.75381692122966,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.16628013592318,2.68615386182526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:137538929..137538952,- | |||
}} |
Latest revision as of 20:55, 3 August 2015
Short description: | p@chr5:137538929..137538952, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137538929..137538952, - |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 9.43e-22 | 3 |
striated muscle cell | 9.43e-22 | 3 |
cardiac muscle cell | 9.43e-22 | 3 |
cardiac muscle myoblast | 9.43e-22 | 3 |
extraembryonic cell | 1.85e-20 | 3 |
trophoblast cell | 1.85e-20 | 3 |
astrocyte of the cerebral cortex | 1.96e-14 | 2 |
astrocyte of the hippocampus | 1.96e-14 | 2 |
muscle precursor cell | 3.46e-11 | 6 |
muscle cell | 3.46e-11 | 6 |
myoblast | 3.46e-11 | 6 |
mesodermal cell | 1.15e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.85e-20 | 3 |
blastula | 1.85e-20 | 3 |
cleaving embryo | 1.85e-20 | 3 |
placenta | 1.23e-14 | 2 |
chorion | 1.23e-14 | 2 |
allantois | 1.23e-14 | 2 |
extraembryonic membrane | 4.52e-10 | 3 |
extraembryonic structure | 4.52e-10 | 3 |
membranous layer | 4.52e-10 | 3 |
embryonic uterus | 9.02e-08 | 4 |
uterus | 9.02e-08 | 4 |
skeletal muscle tissue | 1.24e-07 | 9 |
striated muscle tissue | 1.24e-07 | 9 |
muscle tissue | 1.24e-07 | 9 |
multilaminar epithelium | 1.24e-07 | 9 |
epithelial vesicle | 1.24e-07 | 9 |
musculature | 1.24e-07 | 9 |
somite | 1.24e-07 | 9 |
myotome | 1.24e-07 | 9 |
presomitic mesoderm | 1.24e-07 | 9 |
presumptive segmental plate | 1.24e-07 | 9 |
dermomyotome | 1.24e-07 | 9 |
trunk paraxial mesoderm | 1.24e-07 | 9 |
musculature of body | 6.46e-07 | 10 |