FFCP PHASE1:Mm9::chr7:106530830..106530850,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:106530830..106530850,-|id=chr7:106530830..106530850,-|ontology_enrichment_celltype=CL:0000066!5.52e-07!25|ontology_enrichment_celltype_v019_2=CL:0000682,6.85e-22,3;CL:0000239,1.62e-18,6;CL:0000677,1.62e-18,6;CL:0000584,1.62e-18,6;CL:0000066,5.87e-17,25;CL:0000075,6.39e-16,7;CL:0002563,1.88e-12,9;CL:0002251,1.88e-12,9;CL:0002076,2.78e-11,15;CL:0000473,1.00e-09,7;CL:0000223,1.88e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!2.37e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.77e-22,15;UBERON:0001962,2.68e-14,2;UBERON:0001961,2.68e-14,2;UBERON:0001744,2.68e-14,2;UBERON:0004923,1.86e-13,24;UBERON:0001242,3.01e-13,13;UBERON:0001262,3.01e-13,13;UBERON:0004786,3.01e-13,13;UBERON:0003350,1.88e-12,9;UBERON:0004808,1.88e-12,9;UBERON:0001277,1.88e-12,9;UBERON:0000485,3.09e-10,11;UBERON:0002465,7.57e-10,3;UBERON:0003199,4.80e-08,1;UBERON:0000993,7.68e-08,1|phase1_expression=0.320297694209588,5.23463111459042,8.64498554840118,0,0,6.37941233265181,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,5.27641346454491,6.89078356938024,15.5074318617267,9.69620547086501,0,0,8.64748991555688,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0.216491041011214,1.77351905832569,0.505524445014783,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0.232533944750408,0.536546802799238,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.714130922658041,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,1.17131623288992,0,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0.790575555893047,0,0,0,0.162886959353576,2.96946221350564,0,0,0.604647113929502,0,0.295301892880773,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0.661585194164886,0,0,0.0603129249281559,0.358117032009409,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.609958401380546,0.324016022465404,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr7:106530830..106530850,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:106530830..106530850,- | |||
|description=CAGE_peak_at_chr7:106530830..106530850,- | |||
|id=chr7:106530830..106530850,- | |||
|ontology_enrichment_celltype=CL:0000066!5.52e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.85e-22,3;CL:0000239,1.62e-18,6;CL:0000677,1.62e-18,6;CL:0000584,1.62e-18,6;CL:0000066,5.87e-17,25;CL:0000075,6.39e-16,7;CL:0002563,1.88e-12,9;CL:0002251,1.88e-12,9;CL:0002076,2.78e-11,15;CL:0000473,1.00e-09,7;CL:0000223,1.88e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!2.37e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.77e-22,15;UBERON:0001962,2.68e-14,2;UBERON:0001961,2.68e-14,2;UBERON:0001744,2.68e-14,2;UBERON:0004923,1.86e-13,24;UBERON:0001242,3.01e-13,13;UBERON:0001262,3.01e-13,13;UBERON:0004786,3.01e-13,13;UBERON:0003350,1.88e-12,9;UBERON:0004808,1.88e-12,9;UBERON:0001277,1.88e-12,9;UBERON:0000485,3.09e-10,11;UBERON:0002465,7.57e-10,3;UBERON:0003199,4.80e-08,1;UBERON:0000993,7.68e-08,1 | |||
|phase1_expression=0.320297694209588,5.23463111459042,8.64498554840118,0,0,6.37941233265181,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,5.27641346454491,6.89078356938024,15.5074318617267,9.69620547086501,0,0,8.64748991555688,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0.216491041011214,1.77351905832569,0.505524445014783,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0.232533944750408,0.536546802799238,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.714130922658041,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,1.17131623288992,0,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0.790575555893047,0,0,0,0.162886959353576,2.96946221350564,0,0,0.604647113929502,0,0.295301892880773,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0.661585194164886,0,0,0.0603129249281559,0.358117032009409,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.609958401380546,0.324016022465404,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr7:106530830..106530850,- | |||
}} |
Latest revision as of 20:47, 3 August 2015
Short description: | p@chr7:106530830..106530850, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:106530830..106530850, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.85e-22 | 3 |
brush border epithelial cell | 1.62e-18 | 6 |
gut absorptive cell | 1.62e-18 | 6 |
enterocyte | 1.62e-18 | 6 |
epithelial cell | 5.87e-17 | 25 |
columnar/cuboidal epithelial cell | 6.39e-16 | 7 |
intestinal epithelial cell | 1.88e-12 | 9 |
epithelial cell of alimentary canal | 1.88e-12 | 9 |
endo-epithelial cell | 2.78e-11 | 15 |
defensive cell | 1.00e-09 | 7 |
endodermal cell | 1.88e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.77e-22 | 15 |
gut-associated lymphoid tissue | 2.68e-14 | 2 |
mucosa-associated lymphoid tissue | 2.68e-14 | 2 |
lymphoid tissue | 2.68e-14 | 2 |
organ component layer | 1.86e-13 | 24 |
intestinal mucosa | 3.01e-13 | 13 |
wall of intestine | 3.01e-13 | 13 |
gastrointestinal system mucosa | 3.01e-13 | 13 |
epithelium of mucosa | 1.88e-12 | 9 |
gastrointestinal system epithelium | 1.88e-12 | 9 |
intestinal epithelium | 1.88e-12 | 9 |
simple columnar epithelium | 3.09e-10 | 11 |
lymphoid system | 7.57e-10 | 3 |
egg chamber | 4.80e-08 | 1 |
oviduct | 7.68e-08 | 1 |