FFCP PHASE1:Mm9::chr2:119531323..119531339,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=186|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:119531323..119531339,+|id=chr2:119531323..119531339,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!4.28e-08!10;UBERON:0000411!4.28e-08!10;UBERON:0001950!4.28e-08!10;UBERON:0002791!5.76e-08!29;UBERON:0003528!5.76e-08!29;UBERON:0001893!5.76e-08!29;UBERON:0003056!9.27e-08!49;UBERON:0002020!2.03e-07!34;UBERON:0000956!6.76e-07!21;UBERON:0001869!6.76e-07!21;UBERON:0000203!6.76e-07!21;UBERON:0002780!6.83e-07!39;UBERON:0001890!6.83e-07!39;UBERON:0006240!6.83e-07!39;UBERON:0003080!7.16e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.98e-09,29;UBERON:0002791,6.98e-09,29;UBERON:0001893,6.98e-09,29;UBERON:0002021,1.53e-08,10;UBERON:0000411,1.53e-08,10;UBERON:0001950,1.53e-08,10;UBERON:0002020,3.29e-08,34;UBERON:0003056,7.57e-08,49;UBERON:0000956,7.83e-08,21;UBERON:0001869,7.83e-08,21;UBERON:0000203,7.83e-08,21;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0003080,3.33e-07,40;UBERON:0002619,4.25e-07,17|phase1_expression=0.960893082628764,0,0,1.51232105653415,0,0,0,1.03298658753261,1.97104211012333,1.17032263160997,1.02730780935303,0.797721589953364,0.342401459862411,0.699363219351979,0.333109761815663,0.809901069559304,3.49780939064073,0.315462165358238,0.959801035240171,0.42438965179803,1.19060606211498,0.695036658406197,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,1.0470474879476,1.76469446409304,0,0,1.25896817975577,0.101376931219515,1.83546752161682,0,0.218025156380447,0,0,1.25987779462826,0,1.17447824240415,4.35217285206807,2.68875039313971,0.257259436035947,1.43266719969378,1.03134418455488,0.809265843438391,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,2.90330914463737,3.64516033495565,1.89292465216244,0.571301968807607,0.441737081903227,1.34739879136449,4.31304619582064,6.43453150627015,2.20231761998777,2.93680877595932,1.22885226604995,1.97829431595291,4.20843160571084,4.16730696445408,0.558365998002762,1.68828783009504,2.59757021220577,5.00868595305235,3.84403538157578,1.1183966749518,0.227178579999552,0.604572480854284,0.289864488701678,0.860423876981386,0.679971333707751,2.15881276655127,1.94932925234301,0.896053774194671,0.561777680527007,2.55645483867087,2.07828803682295,3.18005617059306,0.422530259330042,1.28326477414318,0,0,1.73192832808971,1.52015919285059,3.0331466700887,0.45673551887624,1.03575153458869,0.742210695324124,2.08182392119363,1.52232739156071,0.691846491768175,3.16517545160507,2.3517741427141,0.502666365318702,0.741584903203122,0.433798070759735,0,2.26473589926373,1.76673214768315,3.39412677194655,0,0.878342391034642,1.25668024088073,0.510914110417183,1.1981512450592,0.599902730993408,0.889491589511453,1.49790639404823,1.37250180845588,4.77486538028885,1.56441888173049,4.09144731728529,0.83115217823824,1.62241263067758,2.95334155165917,1.24406970610093,1.0108910337347,1.26265113531884,4.68433594665733,0.689706313300419,0.900310649026746,4.37043971723574,1.90502197623718,3.45907044769094,1.87403449119458,2.32833033665114,0.862271971731369,2.26927296201383,1.40760899331159,1.31517439456545,3.05851974148158,0.348252166522167,2.46938563689532,2.18937693500343,0.702213187313235,0.257347907114715,1.13665399758237,1.03562886267751,5.8631514995274,2.52086886045421,0.473489471170421,3.14822770795846,4.01094493507183,3.95307706075693,1.60964040839772,1.75148013550754,0.987359099480883,5.08919138645195,1.29710095273369,0.730999937126662,0.878200461164203,0.939444931322602,1.47202963994889,2.88132914661996,0,1.32225283331772,4.90562976231038,4.87697010906921,0.257734922644187,0.605050573870028,0.22237804384487,1.14135375667535,0.949058123089023,1.4822905925161,1.50801125280162,0.994782360205754,0.779856348476481,2.69645822596266,3.24207074812041,1.7922714592893,0.379335801906163,3.65595240351132,0,3.66572390121566,2.52138233317913,2.66516115583211,2.40298841072178,2.36176236767363,2.35498091762062,1.72756029490521,0.296452627087149,0.166845105716094,0.589676985339609,0.449724224769707,0.811440485554012,0.241177159752417,0.50925170356284,0.863088412352432,2.59416362840057,3.56929837144506,18.6898668485561,0.372140947668503,2.80833905803104,3.78868316920668,0.717589654087649,1.4473305640901,1.10851914099963,1.13694847062291,0.488894929326078,3.39490171550376,2.34690248288502,0.502518772325447,0.952174563544055,3.12213836572478,2.99506773801763,5.3151525515706,2.55127629851979,4.09658286789345,3.10832967358612,1.88043776155965,3.01582567878545,7.07077388964322,1.96705709207614,0,1.12385412991454,1.28932855251423,1.47541450839008,0.504941854408746,0.94652465824877,1.17131623288992,1.93881057959519,0.955875191810208,1.55959071857676,0.849229592366497,1.21443210502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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=186 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:119531323..119531339,+ | |||
|description=CAGE_peak_at_chr2:119531323..119531339,+ | |||
|id=chr2:119531323..119531339,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.28e-08!10;UBERON:0000411!4.28e-08!10;UBERON:0001950!4.28e-08!10;UBERON:0002791!5.76e-08!29;UBERON:0003528!5.76e-08!29;UBERON:0001893!5.76e-08!29;UBERON:0003056!9.27e-08!49;UBERON:0002020!2.03e-07!34;UBERON:0000956!6.76e-07!21;UBERON:0001869!6.76e-07!21;UBERON:0000203!6.76e-07!21;UBERON:0002780!6.83e-07!39;UBERON:0001890!6.83e-07!39;UBERON:0006240!6.83e-07!39;UBERON:0003080!7.16e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.98e-09,29;UBERON:0002791,6.98e-09,29;UBERON:0001893,6.98e-09,29;UBERON:0002021,1.53e-08,10;UBERON:0000411,1.53e-08,10;UBERON:0001950,1.53e-08,10;UBERON:0002020,3.29e-08,34;UBERON:0003056,7.57e-08,49;UBERON:0000956,7.83e-08,21;UBERON:0001869,7.83e-08,21;UBERON:0000203,7.83e-08,21;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0003080,3.33e-07,40;UBERON:0002619,4.25e-07,17 | |||
|phase1_expression=0.960893082628764,0,0,1.51232105653415,0,0,0,1.03298658753261,1.97104211012333,1.17032263160997,1.02730780935303,0.797721589953364,0.342401459862411,0.699363219351979,0.333109761815663,0.809901069559304,3.49780939064073,0.315462165358238,0.959801035240171,0.42438965179803,1.19060606211498,0.695036658406197,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,1.0470474879476,1.76469446409304,0,0,1.25896817975577,0.101376931219515,1.83546752161682,0,0.218025156380447,0,0,1.25987779462826,0,1.17447824240415,4.35217285206807,2.68875039313971,0.257259436035947,1.43266719969378,1.03134418455488,0.809265843438391,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,2.90330914463737,3.64516033495565,1.89292465216244,0.571301968807607,0.441737081903227,1.34739879136449,4.31304619582064,6.43453150627015,2.20231761998777,2.93680877595932,1.22885226604995,1.97829431595291,4.20843160571084,4.16730696445408,0.558365998002762,1.68828783009504,2.59757021220577,5.00868595305235,3.84403538157578,1.1183966749518,0.227178579999552,0.604572480854284,0.289864488701678,0.860423876981386,0.679971333707751,2.15881276655127,1.94932925234301,0.896053774194671,0.561777680527007,2.55645483867087,2.07828803682295,3.18005617059306,0.422530259330042,1.28326477414318,0,0,1.73192832808971,1.52015919285059,3.0331466700887,0.45673551887624,1.03575153458869,0.742210695324124,2.08182392119363,1.52232739156071,0.691846491768175,3.16517545160507,2.3517741427141,0.502666365318702,0.741584903203122,0.433798070759735,0,2.26473589926373,1.76673214768315,3.39412677194655,0,0.878342391034642,1.25668024088073,0.510914110417183,1.1981512450592,0.599902730993408,0.889491589511453,1.49790639404823,1.37250180845588,4.77486538028885,1.56441888173049,4.09144731728529,0.83115217823824,1.62241263067758,2.95334155165917,1.24406970610093,1.0108910337347,1.26265113531884,4.68433594665733,0.689706313300419,0.900310649026746,4.37043971723574,1.90502197623718,3.45907044769094,1.87403449119458,2.32833033665114,0.862271971731369,2.26927296201383,1.40760899331159,1.31517439456545,3.05851974148158,0.348252166522167,2.46938563689532,2.18937693500343,0.702213187313235,0.257347907114715,1.13665399758237,1.03562886267751,5.8631514995274,2.52086886045421,0.473489471170421,3.14822770795846,4.01094493507183,3.95307706075693,1.60964040839772,1.75148013550754,0.987359099480883,5.08919138645195,1.29710095273369,0.730999937126662,0.878200461164203,0.939444931322602,1.47202963994889,2.88132914661996,0,1.32225283331772,4.90562976231038,4.87697010906921,0.257734922644187,0.605050573870028,0.22237804384487,1.14135375667535,0.949058123089023,1.4822905925161,1.50801125280162,0.994782360205754,0.779856348476481,2.69645822596266,3.24207074812041,1.7922714592893,0.379335801906163,3.65595240351132,0,3.66572390121566,2.52138233317913,2.66516115583211,2.40298841072178,2.36176236767363,2.35498091762062,1.72756029490521,0.296452627087149,0.166845105716094,0.589676985339609,0.449724224769707,0.811440485554012,0.241177159752417,0.50925170356284,0.863088412352432,2.59416362840057,3.56929837144506,18.6898668485561,0.372140947668503,2.80833905803104,3.78868316920668,0.717589654087649,1.4473305640901,1.10851914099963,1.13694847062291,0.488894929326078,3.39490171550376,2.34690248288502,0.502518772325447,0.952174563544055,3.12213836572478,2.99506773801763,5.3151525515706,2.55127629851979,4.09658286789345,3.10832967358612,1.88043776155965,3.01582567878545,7.07077388964322,1.96705709207614,0,1.12385412991454,1.28932855251423,1.47541450839008,0.504941854408746,0.94652465824877,1.17131623288992,1.93881057959519,0.955875191810208,1.55959071857676,0.849229592366497,1.21443210502468,0.584511715822624,0.395287777946524,0.642642632843614,1.27746076687442,2.67098405500883,2.44330439030364,1.48473110675282,1.32745138339963,1.69946445308487,1.209294227859,1.69744571780308,0,1.22974059177571,0,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.02131881726136,1.98067203434441,1.55230420539305,1.71469628025274,1.06404140185364,1.78368817602071,1.48094118541909,0.913394847343798,0.469343416127421,1.69465656691056,0.220528398054962,0.49465875882444,1.61464426695906,1.62844897306021,1.43246812803764,1.64140899745061,1.7488850197791,0.927126510052548,1.36696704638282,1.857481811669,1.29636169158798,3.95573759709851,3.96413260390973,2.28778173206523,1.5298058699447,0.419854356970974,1.38199973804424,1.90934123603023,1.26534397432454,1.42323626988794,3.45617090629764,2.50905955217362,1.9652630737156,2.83215127408124,1.32245529160537,0.785267825952089,1.68499465279331,1.24267862617385,2.25477175473676,1.64468200648377,1.65458490457098,1.75006069509643,1.42075805825504,7.09615727061268,2.8165737274981,4.29674469985035,1.99232754408851,4.1069300540421,3.74439008135225,1.89606672376907,2.22997736819181,2.2596410576262,3.76770386635606,1.07416017400489,1.78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| |||
|short_description=p@chr2:119531323..119531339,+ | |||
}} |
Latest revision as of 20:44, 3 August 2015
Short description: | p@chr2:119531323..119531339, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:119531323..119531339, + |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.98e-09 | 29 |
regional part of telencephalon | 6.98e-09 | 29 |
telencephalon | 6.98e-09 | 29 |
occipital lobe | 1.53e-08 | 10 |
visual cortex | 1.53e-08 | 10 |
neocortex | 1.53e-08 | 10 |
gray matter | 3.29e-08 | 34 |
pre-chordal neural plate | 7.57e-08 | 49 |
cerebral cortex | 7.83e-08 | 21 |
cerebral hemisphere | 7.83e-08 | 21 |
pallium | 7.83e-08 | 21 |
regional part of forebrain | 3.17e-07 | 39 |
forebrain | 3.17e-07 | 39 |
future forebrain | 3.17e-07 | 39 |
anterior neural tube | 3.33e-07 | 40 |
regional part of cerebral cortex | 4.25e-07 | 17 |