FFCP PHASE1:Mm9::chr5:136387343..136387354,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=856|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:136387343..136387354,-|id=chr5:136387343..136387354,-|ontology_enrichment_celltype=CL:0000393!5.37e-16!39;CL:0000211!5.37e-16!39;CL:0000055!1.67e-14!50;CL:0000540!1.68e-14!33;CL:0000047!1.68e-14!33;CL:0000031!1.68e-14!33;CL:0000404!1.68e-14!33;CL:0000117!1.70e-14!23;CL:0000337!1.70e-14!23;CL:0002319!1.34e-13!43;CL:0000221!2.10e-13!44;CL:0000133!2.10e-13!44;CL:0002321!5.76e-09!70;CL:0000220!5.76e-09!70;CL:0000034!2.67e-08!97;CL:0000723!5.15e-08!91;CL:0000048!5.15e-08!91;CL:0000548!1.71e-07!115;CL:0000004!1.71e-07!115;CL:0000255!1.71e-07!115|ontology_enrichment_celltype_v019_2=CL:0000117,1.69e-37,23;CL:0000337,1.69e-37,23;CL:0000540,1.31e-24,33;CL:0000047,1.31e-24,33;CL:0000031,1.31e-24,33;CL:0000404,1.31e-24,33;CL:0000393,1.92e-24,39;CL:0000211,1.92e-24,39;CL:0002319,7.78e-22,43;CL:0000221,3.24e-21,44;CL:0000133,3.24e-21,44;CL:0002321,1.41e-16,70;CL:0000723,1.40e-12,91;CL:0000048,1.40e-12,91;CL:0000034,2.07e-11,97;CL:0002614,1.35e-08,3;CL:0002612,2.94e-08,3;CL:0002613,1.12e-07,3;CL:0002610,1.61e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.25e-19!75;UBERON:0001016!4.25e-19!75;UBERON:0001017!9.08e-19!73;UBERON:0005743!9.08e-19!73;UBERON:0002020!1.86e-14!34;UBERON:0001049!2.29e-13!52;UBERON:0005068!2.29e-13!52;UBERON:0006241!2.29e-13!52;UBERON:0007135!2.29e-13!52;UBERON:0004121!7.08e-13!102;UBERON:0000924!7.08e-13!102;UBERON:0006601!7.08e-13!102;UBERON:0000955!9.44e-12!50;UBERON:0006238!9.44e-12!50;UBERON:0002616!1.63e-11!49;UBERON:0002791!6.17e-11!29;UBERON:0003528!6.17e-11!29;UBERON:0001893!6.17e-11!29;UBERON:0002346!1.92e-10!71;UBERON:0003075!1.92e-10!71;UBERON:0007284!1.92e-10!71;UBERON:0003080!1.84e-09!40;UBERON:0002780!2.75e-09!39;UBERON:0001890!2.75e-09!39;UBERON:0006240!2.75e-09!39;UBERON:0000025!1.14e-08!114;UBERON:0000033!2.03e-08!63;UBERON:0004111!6.95e-08!122;UBERON:0002021!1.12e-07!10;UBERON:0000411!1.12e-07!10;UBERON:0001950!1.12e-07!10;UBERON:0000956!1.34e-07!21;UBERON:0001869!1.34e-07!21;UBERON:0000203!1.34e-07!21;UBERON:0003056!3.14e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.18e-35,34;UBERON:0000073,5.96e-31,54;UBERON:0001017,1.46e-28,73;UBERON:0001016,1.32e-27,75;UBERON:0001049,2.63e-25,52;UBERON:0005068,2.63e-25,52;UBERON:0006241,2.63e-25,52;UBERON:0007135,2.63e-25,52;UBERON:0003528,4.18e-25,29;UBERON:0002791,4.18e-25,29;UBERON:0001893,4.18e-25,29;UBERON:0004121,3.05e-20,95;UBERON:0000924,3.05e-20,95;UBERON:0006601,3.05e-20,95;UBERON:0002780,1.55e-19,39;UBERON:0001890,1.55e-19,39;UBERON:0006240,1.55e-19,39;UBERON:0002346,2.21e-19,64;UBERON:0003075,2.21e-19,64;UBERON:0007284,2.21e-19,64;UBERON:0003080,6.34e-19,40;UBERON:0002021,1.31e-17,10;UBERON:0000411,1.31e-17,10;UBERON:0001950,1.31e-17,10;UBERON:0002616,1.46e-17,46;UBERON:0000955,4.43e-17,47;UBERON:0006238,4.43e-17,47;UBERON:0010371,3.20e-16,73;UBERON:0000956,9.80e-16,21;UBERON:0001869,9.80e-16,21;UBERON:0000203,9.80e-16,21;UBERON:0003056,1.49e-14,49;UBERON:0010314,7.05e-14,92;UBERON:0001948,5.11e-13,5;UBERON:0002315,5.11e-13,5;UBERON:0000025,6.41e-12,114;UBERON:0002619,6.50e-12,17;UBERON:0002420,8.84e-11,8;UBERON:0007245,8.84e-11,8;UBERON:0010009,8.84e-11,8;UBERON:0010011,8.84e-11,8;UBERON:0000454,8.84e-11,8;UBERON:0002240,9.08e-11,6;UBERON:0005174,9.08e-11,6;UBERON:0001137,9.08e-11,6;UBERON:0004111,1.10e-10,122;UBERON:0002038,1.35e-08,3;UBERON:0009663,1.35e-08,3;UBERON:0009661,1.35e-08,3;UBERON:0000125,1.35e-08,3;UBERON:0002308,1.35e-08,3;UBERON:0002257,2.94e-08,3;UBERON:0011216,3.35e-08,194;UBERON:0004684,1.61e-07,3;UBERON:0002275,1.61e-07,3;UBERON:0003076,6.14e-07,12;UBERON:0003057,6.14e-07,12|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0.234064526321993,0.34243593645101,0.398860794976682,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.297872853602656,0.261199789138935,0.319984845586813,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0,0.771778308107841,1.43266719969378,1.03134418455488,1.21389876515759,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,0.899899717281399,0.988866362566974,2.8419204597844,1.19840044207362,1.92109152660777,1.14058573539325,2.43010688997043,1.05162480675691,4.57041575046086,5.74258206474195,0.857435594504678,1.62937300731002,0,1.10115880999389,2.55374676170375,2.76491759861238,1.31886287730194,3.20206752608434,2.08365348222704,5.862842979029,3.37657566019008,3.36156145108982,5.00868595305235,3.55929201997757,1.86399445825301,0.302904773332736,0.226714680320357,0,0,0,1.07940638327563,0,0,0,0.852151612890289,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0.1141838797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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=856 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:136387343..136387354,- | |||
|description=CAGE_peak_at_chr5:136387343..136387354,- | |||
|id=chr5:136387343..136387354,- | |||
|ontology_enrichment_celltype=CL:0000393!5.37e-16!39;CL:0000211!5.37e-16!39;CL:0000055!1.67e-14!50;CL:0000540!1.68e-14!33;CL:0000047!1.68e-14!33;CL:0000031!1.68e-14!33;CL:0000404!1.68e-14!33;CL:0000117!1.70e-14!23;CL:0000337!1.70e-14!23;CL:0002319!1.34e-13!43;CL:0000221!2.10e-13!44;CL:0000133!2.10e-13!44;CL:0002321!5.76e-09!70;CL:0000220!5.76e-09!70;CL:0000034!2.67e-08!97;CL:0000723!5.15e-08!91;CL:0000048!5.15e-08!91;CL:0000548!1.71e-07!115;CL:0000004!1.71e-07!115;CL:0000255!1.71e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.69e-37,23;CL:0000337,1.69e-37,23;CL:0000540,1.31e-24,33;CL:0000047,1.31e-24,33;CL:0000031,1.31e-24,33;CL:0000404,1.31e-24,33;CL:0000393,1.92e-24,39;CL:0000211,1.92e-24,39;CL:0002319,7.78e-22,43;CL:0000221,3.24e-21,44;CL:0000133,3.24e-21,44;CL:0002321,1.41e-16,70;CL:0000723,1.40e-12,91;CL:0000048,1.40e-12,91;CL:0000034,2.07e-11,97;CL:0002614,1.35e-08,3;CL:0002612,2.94e-08,3;CL:0002613,1.12e-07,3;CL:0002610,1.61e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.25e-19!75;UBERON:0001016!4.25e-19!75;UBERON:0001017!9.08e-19!73;UBERON:0005743!9.08e-19!73;UBERON:0002020!1.86e-14!34;UBERON:0001049!2.29e-13!52;UBERON:0005068!2.29e-13!52;UBERON:0006241!2.29e-13!52;UBERON:0007135!2.29e-13!52;UBERON:0004121!7.08e-13!102;UBERON:0000924!7.08e-13!102;UBERON:0006601!7.08e-13!102;UBERON:0000955!9.44e-12!50;UBERON:0006238!9.44e-12!50;UBERON:0002616!1.63e-11!49;UBERON:0002791!6.17e-11!29;UBERON:0003528!6.17e-11!29;UBERON:0001893!6.17e-11!29;UBERON:0002346!1.92e-10!71;UBERON:0003075!1.92e-10!71;UBERON:0007284!1.92e-10!71;UBERON:0003080!1.84e-09!40;UBERON:0002780!2.75e-09!39;UBERON:0001890!2.75e-09!39;UBERON:0006240!2.75e-09!39;UBERON:0000025!1.14e-08!114;UBERON:0000033!2.03e-08!63;UBERON:0004111!6.95e-08!122;UBERON:0002021!1.12e-07!10;UBERON:0000411!1.12e-07!10;UBERON:0001950!1.12e-07!10;UBERON:0000956!1.34e-07!21;UBERON:0001869!1.34e-07!21;UBERON:0000203!1.34e-07!21;UBERON:0003056!3.14e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.18e-35,34;UBERON:0000073,5.96e-31,54;UBERON:0001017,1.46e-28,73;UBERON:0001016,1.32e-27,75;UBERON:0001049,2.63e-25,52;UBERON:0005068,2.63e-25,52;UBERON:0006241,2.63e-25,52;UBERON:0007135,2.63e-25,52;UBERON:0003528,4.18e-25,29;UBERON:0002791,4.18e-25,29;UBERON:0001893,4.18e-25,29;UBERON:0004121,3.05e-20,95;UBERON:0000924,3.05e-20,95;UBERON:0006601,3.05e-20,95;UBERON:0002780,1.55e-19,39;UBERON:0001890,1.55e-19,39;UBERON:0006240,1.55e-19,39;UBERON:0002346,2.21e-19,64;UBERON:0003075,2.21e-19,64;UBERON:0007284,2.21e-19,64;UBERON:0003080,6.34e-19,40;UBERON:0002021,1.31e-17,10;UBERON:0000411,1.31e-17,10;UBERON:0001950,1.31e-17,10;UBERON:0002616,1.46e-17,46;UBERON:0000955,4.43e-17,47;UBERON:0006238,4.43e-17,47;UBERON:0010371,3.20e-16,73;UBERON:0000956,9.80e-16,21;UBERON:0001869,9.80e-16,21;UBERON:0000203,9.80e-16,21;UBERON:0003056,1.49e-14,49;UBERON:0010314,7.05e-14,92;UBERON:0001948,5.11e-13,5;UBERON:0002315,5.11e-13,5;UBERON:0000025,6.41e-12,114;UBERON:0002619,6.50e-12,17;UBERON:0002420,8.84e-11,8;UBERON:0007245,8.84e-11,8;UBERON:0010009,8.84e-11,8;UBERON:0010011,8.84e-11,8;UBERON:0000454,8.84e-11,8;UBERON:0002240,9.08e-11,6;UBERON:0005174,9.08e-11,6;UBERON:0001137,9.08e-11,6;UBERON:0004111,1.10e-10,122;UBERON:0002038,1.35e-08,3;UBERON:0009663,1.35e-08,3;UBERON:0009661,1.35e-08,3;UBERON:0000125,1.35e-08,3;UBERON:0002308,1.35e-08,3;UBERON:0002257,2.94e-08,3;UBERON:0011216,3.35e-08,194;UBERON:0004684,1.61e-07,3;UBERON:0002275,1.61e-07,3;UBERON:0003076,6.14e-07,12;UBERON:0003057,6.14e-07,12 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0.234064526321993,0.34243593645101,0.398860794976682,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.297872853602656,0.261199789138935,0.319984845586813,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0,0.771778308107841,1.43266719969378,1.03134418455488,1.21389876515759,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,0.899899717281399,0.988866362566974,2.8419204597844,1.19840044207362,1.92109152660777,1.14058573539325,2.43010688997043,1.05162480675691,4.57041575046086,5.74258206474195,0.857435594504678,1.62937300731002,0,1.10115880999389,2.55374676170375,2.76491759861238,1.31886287730194,3.20206752608434,2.08365348222704,5.862842979029,3.37657566019008,3.36156145108982,5.00868595305235,3.55929201997757,1.86399445825301,0.302904773332736,0.226714680320357,0,0,0,1.07940638327563,0,0,0,0.852151612890289,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0.11418387971906,0,0,0.346970653532272,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0.494389935468748,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0.41889341362691,0,0.239630249011841,0,0,0.299581278809645,0,0.376963056338593,0.347648640384553,0.511430914660661,1.45451631191692,0.811206315338788,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0,0.30140963567143,0.136072998302656,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.697601834251224,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0.878200461164203,0.268412837520744,0,0.205809224758569,0,0,0.213288250535234,0,0.38660238396628,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0,0.518054945597687,0.578596234326046,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.849229592366497,0.809621403349789,0.876767573733936,0,0.321321316421807,0,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.665957860122194,0.897138566094757,0.335769232728157,0,0,0,0.214368379079066,0.501572104035363,0.564751842617067,2.76195141904306,2.86447756719698,2.92150409984269,2.05524755931193,1.5107877947794,1.35004500046361,1.80128481289688,3.62513927187364,1.03552062350364,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0.754505365544305,0.37456602987953,0.320125762024346,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0.290692833264657,0.376437521661322,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr5:136387343..136387354,- | |||
}} |
Latest revision as of 19:47, 3 August 2015
Short description: | p@chr5:136387343..136387354, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136387343..136387354, - |
Coexpression cluster: | MCL_coexpression_mm9:856 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.69e-37 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-37 | 23 |
neuron | 1.31e-24 | 33 |
neuronal stem cell | 1.31e-24 | 33 |
neuroblast | 1.31e-24 | 33 |
electrically signaling cell | 1.31e-24 | 33 |
electrically responsive cell | 1.92e-24 | 39 |
electrically active cell | 1.92e-24 | 39 |
neural cell | 7.78e-22 | 43 |
ectodermal cell | 3.24e-21 | 44 |
neurectodermal cell | 3.24e-21 | 44 |
embryonic cell | 1.41e-16 | 70 |
somatic stem cell | 1.40e-12 | 91 |
multi fate stem cell | 1.40e-12 | 91 |
stem cell | 2.07e-11 | 97 |
neuron of the substantia nigra | 1.35e-08 | 3 |
neuron of the ventral spinal cord | 2.94e-08 | 3 |
striatum neuron | 1.12e-07 | 3 |
raphe nuclei neuron | 1.61e-07 | 3 |