FFCP PHASE1:Hg19::chr6:53658203..53658215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:53658203..53658215,- | |||
|coexpression_cluster_id=C161 | |coexpression_cluster_id=C161 | ||
|description=CAGE_peak_at_chr6:53658203..53658215,- | |description=CAGE_peak_at_chr6:53658203..53658215,- | ||
Latest revision as of 02:24, 31 July 2015
| Short description: | p@chr6:53658203..53658215, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr6:53658203..53658215, - |
| Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr6:53658203..53658215- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cortical cell of adrenal gland | 2.74e-50 | 2 |
| steroid hormone secreting cell | 4.27e-34 | 3 |
| glandular epithelial cell | 2.19e-12 | 9 |
| endocrine cell | 2.19e-12 | 9 |
| squamous epithelial cell | 1.52e-07 | 63 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| adrenal gland | 4.27e-34 | 3 |
| adrenal cortex | 4.27e-34 | 3 |
| adrenal/interrenal gland | 4.27e-34 | 3 |
| cortex | 5.55e-08 | 15 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| endocrine gland cancer | 7.67e-18 | 6 |
| squamous cell carcinoma | 2.00e-08 | 14 |
Showing 1 to 2 of 2 entries
