FFCP PHASE1:Hg19::chr12:25055145..25055171,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=586 | |EntrezGene=entrezgene:586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=976 | |HGNC=HGNC:976 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q68DQ7 | |UniProt=uniprot:Q68DQ7 | ||
|association_with_transcript=58bp_to_ENST00000538118_5end | |association_with_transcript=58bp_to_ENST00000538118_5end | ||
|cluster_id=chr12:25055145..25055171,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_6_at_BCAT1_5end | |description=CAGE_peak_6_at_BCAT1_5end |
Revision as of 07:42, 24 July 2015
Short description: | p6@BCAT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 58bp_to_ENST00000538118_5end |
EntrezGene: | 586 |
HGNC: | 976 |
UniProt: | Q68DQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@BCAT1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.68e-33 | 48 |
phagocyte | 2.68e-33 | 48 |
endothelial cell of vascular tree | 1.86e-30 | 24 |
monopoietic cell | 6.36e-28 | 59 |
monocyte | 6.36e-28 | 59 |
monoblast | 6.36e-28 | 59 |
promonocyte | 6.36e-28 | 59 |
macrophage dendritic cell progenitor | 1.15e-26 | 61 |
classical monocyte | 2.33e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-24 | 42 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
immune system | 1.31e-22 | 93 |
blood vessel endothelium | 2.66e-21 | 18 |
endothelium | 2.66e-21 | 18 |
cardiovascular system endothelium | 2.66e-21 | 18 |
bone marrow | 2.25e-19 | 76 |
hemolymphoid system | 8.70e-18 | 108 |
bone element | 3.19e-17 | 82 |
simple squamous epithelium | 1.33e-16 | 22 |
skeletal element | 8.14e-15 | 90 |
lateral plate mesoderm | 2.24e-14 | 203 |
Showing 1 to 10 of 60 entries