FFCP PHASE1:Hg19::chr10:102505954..102505973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5076 | |EntrezGene=entrezgene:5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8616 | |HGNC=HGNC:8616 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=G3V5U4 | |UniProt=uniprot:G3V5U4 | ||
|association_with_transcript=-3bp_to_ENST00000556085_5end | |association_with_transcript=-3bp_to_ENST00000556085_5end | ||
|cluster_id=chr10:102505954..102505973,+ | |||
|coexpression_cluster_id=C1556 | |coexpression_cluster_id=C1556 | ||
|description=CAGE_peak_3_at_PAX2_5end | |description=CAGE_peak_3_at_PAX2_5end |
Revision as of 09:35, 23 July 2015
Short description: | p3@PAX2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | -3bp_to_ENST00000556085_5end |
EntrezGene: | 5076 |
HGNC: | 8616 |
UniProt: | G3V5U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@PAX2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.46e-75 | 10 |
nephron tubule epithelial cell | 2.46e-75 | 10 |
kidney cell | 1.46e-62 | 17 |
kidney epithelial cell | 1.46e-62 | 17 |
epithelial cell of nephron | 6.18e-60 | 15 |
kidney cortical cell | 9.22e-40 | 12 |
renal cortical epithelial cell | 9.22e-40 | 12 |
brush border epithelial cell | 9.99e-24 | 3 |
kidney cortex tubule cell | 9.99e-24 | 3 |
epithelial cell of proximal tubule | 9.99e-24 | 3 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.46e-75 | 10 |
kidney | 5.03e-73 | 26 |
kidney mesenchyme | 5.03e-73 | 26 |
upper urinary tract | 5.03e-73 | 26 |
kidney rudiment | 5.03e-73 | 26 |
kidney field | 5.03e-73 | 26 |
excretory tube | 4.01e-67 | 16 |
kidney epithelium | 4.01e-67 | 16 |
cavitated compound organ | 8.44e-61 | 31 |
nephron epithelium | 6.18e-60 | 15 |
Showing 1 to 10 of 78 entries