UBERON:0004535: Difference between revisions
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|located_in= | |located_in= | ||
|name=cardiovascular system | |name=cardiovascular system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001009 | |part_of=UBERON:0001009 | ||
Latest revision as of 17:46, 12 September 2014
| Name: | cardiovascular system | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Anatomical system that has as its parts the heart and blood vessels." [BTO:0000088] | ||
| Xrefs: |
| ||
| Synonyms: |
"CV system" RELATED [BTO:0000088] "Herz und Gefaesssystem" RELATED [BTO:0000088] | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000467(anatomical system) |
|---|---|
| part_of: | UBERON:0001009(circulatory system) |
Children
| is a: | UBERON:0011695 (embryonic cardiovascular system) |
|---|---|
| part of: | UBERON:0000178 (blood),UBERON:0003084 (heart primordium),UBERON:0004537 (blood vasculature),UBERON:0004572 (arterial system),UBERON:0004852 (cardiovascular system endothelium),UBERON:0007798 (vascular system),UBERON:0008886 (pulmonary vascular system),UBERON:0015410 (heart plus pericardium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10046-101G1 (heart, fetal, pool1)
- 10052-101G7 (aorta, adult, pool1)
- 10053-101G8 (blood, adult, pool1)
- 10078-102A6 (left ventricle, adult, donor1)
- 10079-102A7 (left atrium, adult, donor1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 10205-103F7 (heart - mitral valve, adult)
- 10206-103F8 (heart - pulmonic valve, adult)
- 10207-103F9 (heart - tricuspid valve, adult)
... further results Mouse (Mus musculus)
- 10046-101G1 (heart, fetal, pool1)
- 10052-101G7 (aorta, adult, pool1)
- 10053-101G8 (blood, adult, pool1)
- 10078-102A6 (left ventricle, adult, donor1)
- 10079-102A7 (left atrium, adult, donor1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 10205-103F7 (heart - mitral valve, adult)
- 10206-103F8 (heart - pulmonic valve, adult)
- 10207-103F9 (heart - tricuspid valve, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004535 (cardiovascular system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.2e-82 | FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_4d3f53f7e1369d8240af66878fc79d02 | p2@SOX17 |
| 6.2e-82 | FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_4d3f53f7e1369d8240af66878fc79d02 | p2@SOX17 |
| 7.97e-71 | FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_a7035eed53688542c89e68eb0424cbdc | p@chr12:96830430..96830450, + |
| 7.97e-71 | FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_a7035eed53688542c89e68eb0424cbdc | p@chr12:96830430..96830450, + |
| 1.13e-70 | FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_27c2521d67ef07aeb028c88b918e63d7 | p@chr11:128562673..128562716, - |
| 1.13e-70 | FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_27c2521d67ef07aeb028c88b918e63d7 | p@chr11:128562673..128562716, - |
| 2.4e-67 | FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_7f112db597568bdfaf12cdd4b186900e | p@chr19:36187511..36187515, - |
| 2.4e-67 | FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_7f112db597568bdfaf12cdd4b186900e | p@chr19:36187511..36187515, - |
| 1.46e-63 | FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_113e5573c3d3477c210d3662bade37b2 | p@chr9:24549775..24549776, - |
| 1.46e-63 | FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_113e5573c3d3477c210d3662bade37b2 | p@chr4:147375434..147375447, + |
| 1.46e-63 | FFCP PHASE1:Mm9::chr4:151692832..151692868,+#_113e5573c3d3477c210d3662bade37b2 | p@chr4:151692832..151692868, + |
| 1.46e-63 | FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_113e5573c3d3477c210d3662bade37b2 | p@chr9:24549775..24549776, - |
| 1.46e-63 | FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_113e5573c3d3477c210d3662bade37b2 | p@chr1:137747392..137747402, - |
| 1.46e-63 | FFCP PHASE2:Mm9::chr4:151692832..151692868,+#_113e5573c3d3477c210d3662bade37b2 | p@chr4:151692832..151692868, + |
| 1.46e-63 | FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_113e5573c3d3477c210d3662bade37b2 | p@chr4:147375434..147375447, + |
| 1.46e-63 | FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_113e5573c3d3477c210d3662bade37b2 | p@chr1:137747392..137747402, - |
| 7.0e-61 | FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_38e6ef3e1254fca8e60bfd5ff694e1e3 | p@chr4:140980456..140980463, + |
| 7.0e-61 | FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_38e6ef3e1254fca8e60bfd5ff694e1e3 | p@chr4:140980456..140980463, + |
| 7.27e-61 | FFCP PHASE1:Hg19::chr15:39542867..39542890,+#_25850b31b3d3a6a57360756eef3e5296 | p1@C15orf54 |
| 7.27e-61 | FFCP PHASE2:Hg19::chr15:39542867..39542890,+#_25850b31b3d3a6a57360756eef3e5296 | p1@C15orf54 |
| 1.56e-60 | FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_cbddc853dde47b7535619635d5ad95a6 | p@chr3:30334038..30334060, + |
| 1.56e-60 | FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_cbddc853dde47b7535619635d5ad95a6 | p@chr3:30334038..30334060, + |
| 3.45e-60 | FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_c0c6d8aaec4a53298530301f92c91317 | p@chr12:113728951..113728965, + |
| 3.45e-60 | FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_c0c6d8aaec4a53298530301f92c91317 | p@chr12:113728951..113728965, + |
| 3.45e-60 | FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_c0c6d8aaec4a53298530301f92c91317 | p@chr1:137737483..137737497, - |
| 3.45e-60 | FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_c0c6d8aaec4a53298530301f92c91317 | p@chr1:137737483..137737497, - |
| 3.77e-60 | FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_dbd8acbf594c12e21b1a6752c73d8dab | p@chr4:147375200..147375220, + |
| 3.77e-60 | FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_dbd8acbf594c12e21b1a6752c73d8dab | p@chr4:147375200..147375220, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744668..137744681, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55568737..55568746, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744550..137744565, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55563577..55563611, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_608c68f73df6918e38f8cdbf82d56fea | p2@Mov10l1 |
| 8.52e-60 | FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr11:65461897..65461929, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55565785..55565833, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55579265..55579297, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55581579..55581620, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55584663..55584731, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr4:147375901..147375913, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55563577..55563611, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr19:36193772..36193793, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_608c68f73df6918e38f8cdbf82d56fea | p2@Mov10l1 |
| 8.52e-60 | FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr5:120286706..120286736, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55586837..55586880, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744636..137744654, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55584272..55584298, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chrX:56432790..56432814,+#_608c68f73df6918e38f8cdbf82d56fea | p@chrX:56432790..56432814, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744333..137744352, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137743272..137743307, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chrX:56432790..56432814,+#_608c68f73df6918e38f8cdbf82d56fea | p@chrX:56432790..56432814, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744611..137744621, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744333..137744352, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55572120..55572173, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137745434..137745445, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55568937..55568988, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137743272..137743307, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55579265..55579297, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55581579..55581620, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr4:147375901..147375913, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744668..137744681, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55572120..55572173, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55568790..55568803, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr5:120286706..120286736, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55584197..55584239, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr11:58815923..58815951, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55584197..55584239, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55568790..55568803, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55584663..55584731, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55568737..55568746, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55568937..55568988, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137747289..137747313, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744550..137744565, + |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55584272..55584298, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137747382..137747385, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137747953..137747967, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr19:36193772..36193793, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137747289..137747313, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55586837..55586880, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr11:58815923..58815951, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55571909..55571953, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr11:65461897..65461929, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137745434..137745445, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744636..137744654, + |
| 8.52e-60 | FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55565785..55565833, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137747382..137747385, - |
| 8.52e-60 | FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr14:55571909..55571953, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137747953..137747967, - |
| 8.52e-60 | FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_608c68f73df6918e38f8cdbf82d56fea | p@chr1:137744611..137744621, + |
| 3.61e-57 | FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_b2ba76e4e2893693422463c0d8b7fcaa | p@chr1:137742152..137742184, - |
| 3.61e-57 | FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_b2ba76e4e2893693422463c0d8b7fcaa | p@chr1:137742152..137742184, - |
| 2.05e-56 | FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_a873f46e82f8e8cf8af40793a0664f1c | p@chr1:137742470..137742481, + |
| 2.05e-56 | FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_a873f46e82f8e8cf8af40793a0664f1c | p2@Tnni3 |
| 2.05e-56 | FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_a873f46e82f8e8cf8af40793a0664f1c | p@chr16:5431481..5431510, + |
| 2.05e-56 | FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_a873f46e82f8e8cf8af40793a0664f1c | p@chr14:55577329..55577367, - |
| 2.05e-56 | FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_a873f46e82f8e8cf8af40793a0664f1c | p@chr14:55577329..55577367, - |
| 2.05e-56 | FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_a873f46e82f8e8cf8af40793a0664f1c | p@chr16:5431481..5431510, + |
| 2.05e-56 | FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_a873f46e82f8e8cf8af40793a0664f1c | p2@Tnni3 |
| 2.05e-56 | FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_a873f46e82f8e8cf8af40793a0664f1c | p@chr1:137742470..137742481, + |
| 2.23e-56 | FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_9fd54b1a2e860acc9062e1284856995c | p@chr10:53062244..53062249, + |
| 2.23e-56 | FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_9fd54b1a2e860acc9062e1284856995c | p5@Nebl |
