Personal tools

UBERON:0007503: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0007503 |name=epithelial vesicle |namespace= |def="A closed epithelium with a lumen." [AEO:JB] |xref=AEO:0000119;;EHDAA2:0003119 |is_a=UBERON:0000483...")
 
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0007503
|alt_id=EHDAA2:0003119
|name=epithelial vesicle
|namespace=
|def="A closed epithelium with a lumen." [AEO:JB]
|xref=AEO:0000119;;EHDAA2:0003119
|is_a=UBERON:0000483
|synonym=
|comment=
|comment=
|alt_id=EHDAA2:0003119
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A closed epithelium with a lumen." [AEO:JB]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007503
|is_a=UBERON:0000483
|is_obsolete=
|located_in=
|located_in=
|name=epithelial vesicle
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=AEO:0000119;;EHDAA2:0003119
}}
}}

Revision as of 11:43, 12 September 2014

Name:epithelial vesicle
Definition:"A closed epithelium with a lumen." [AEO:JB]
Xrefs:
links:

AEO:0000119

EHDAA2:0003119
Alt_id: EHDAA2:0003119

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000483(epithelium)



Children

is a:UBERON:0002329 (somite),UBERON:0004209 (renal vesicle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007503 (epithelial vesicle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.24e-58FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_c91f8a5b89ef24f76025c1c85ad5ced6p@chrX:160838683..160838694, +
5.24e-58FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_c91f8a5b89ef24f76025c1c85ad5ced6p@chrX:160838683..160838694, +
5.11e-50FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_85fd1b8da43013fff0f84f5415c82cb3p@chrX:65748600..65748616, +
5.11e-50FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_85fd1b8da43013fff0f84f5415c82cb3p@chr12:105433069..105433075, -
5.11e-50FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_85fd1b8da43013fff0f84f5415c82cb3p@chrX:65748600..65748616, +
5.11e-50FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_85fd1b8da43013fff0f84f5415c82cb3p@chr12:105433069..105433075, -
1.47e-48FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_ade5bec91dbdbe66f19288ef56f8cd7ap@chrX:160838787..160838800, +
1.47e-48FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_ade5bec91dbdbe66f19288ef56f8cd7ap@chrX:160838787..160838800, +
8.42e-44FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_05bf8c8c0f7bfdd2199642d01f278ae0p@chr11:81849982..81850000, +
8.42e-44FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_05bf8c8c0f7bfdd2199642d01f278ae0p@chr11:81849982..81850000, +
1.15e-40FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_1cac8c52261a3d998e15d9660238922ap@chr17:14813242..14813246, -
1.15e-40FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_1cac8c52261a3d998e15d9660238922ap@chr17:14813242..14813246, -
1.03e-39FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_cfd0c742c38e9455d98229636bdb84e4p8@ARHGAP22
1.03e-39FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_cfd0c742c38e9455d98229636bdb84e4p8@ARHGAP22
3.7e-39FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_47ce7c0f4997295df810cc6c23f636a2p4@Gpr39
3.7e-39FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_47ce7c0f4997295df810cc6c23f636a2p4@Gpr39
3.75e-39FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_6876046f2e59c4b0d0bff868f0c0ffa9p@chrX:160823859..160823870, +
3.75e-39FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_6876046f2e59c4b0d0bff868f0c0ffa9p@chrX:160840048..160840057, +
3.75e-39FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_6876046f2e59c4b0d0bff868f0c0ffa9p@chrX:160823859..160823870, +
3.75e-39FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_6876046f2e59c4b0d0bff868f0c0ffa9p@chrX:160840025..160840037, +
3.75e-39FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_6876046f2e59c4b0d0bff868f0c0ffa9p@chrX:160840025..160840037, +
3.75e-39FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_6876046f2e59c4b0d0bff868f0c0ffa9p@chrX:160840048..160840057, +
9.21e-37FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_23bd1ebe0058374c1a64f686c9329a60p@chr6:53359400..53359406, +
9.21e-37FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_23bd1ebe0058374c1a64f686c9329a60p@chr6:53359400..53359406, +
1.05e-36FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_93a45efbf692160d60b122deb1f32c04p@chr9:35685631..35685657, +
1.05e-36FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_93a45efbf692160d60b122deb1f32c04p@chr9:35685631..35685657, +
1.84e-35FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_9df5187680265732f8341faf062efd32p2@RCN3
1.84e-35FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_9df5187680265732f8341faf062efd32p2@RCN3
3.31e-35FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_6cbf8a0e0b7bf775208fa5a2778bd8d6p11@Fam198b
3.31e-35FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_6cbf8a0e0b7bf775208fa5a2778bd8d6p11@Fam198b
3.69e-35FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_61607901202d2b55f08584bb6836df21p@chr1:127574253..127574264, +
3.69e-35FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_61607901202d2b55f08584bb6836df21p@chr1:127574253..127574264, +
5.09e-35FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_ef9bd621c1b5ae179be406cd96b951ddp7@Gpr39
5.09e-35FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_ef9bd621c1b5ae179be406cd96b951ddp7@Gpr39
5.98e-35FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_e07cee3aabf064b627ffcdfb83f52740p11@Gpr39
5.98e-35FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_e07cee3aabf064b627ffcdfb83f52740p11@Gpr39
6.1e-35FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_8459b4ee41e5eec1bf753bdd84e0f1ccp4@ARHGAP22
6.1e-35FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_8459b4ee41e5eec1bf753bdd84e0f1ccp4@ARHGAP22
6.74e-35FFCP PHASE1:Hg19::chr7:100773764..100773799,-#_13b9325ac84fa0039aa51e12b738d04cp@chr7:100773764..100773799, -
6.74e-35FFCP PHASE2:Hg19::chr7:100773764..100773799,-#_13b9325ac84fa0039aa51e12b738d04cp@chr7:100773764..100773799, -
7.03e-35FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_3515d438821f4786aa611a6c54252f2bp@chrX:160839768..160839780, +
7.03e-35FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_3515d438821f4786aa611a6c54252f2bp@chrX:160839768..160839780, +
1.14e-34FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_b20acb82453622ca61154b94f5cb43e5p2@SASH1
1.14e-34FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_b20acb82453622ca61154b94f5cb43e5p2@SASH1
1.33e-34FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_7ba86aa0f9d4de8b9beea285bc6520dap8@Gpr39
1.33e-34FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_7ba86aa0f9d4de8b9beea285bc6520dap8@Gpr39
6.77e-34FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_96663f62a86fe5e1b00bfaea23e1576cp@chr9:35685445..35685517, +
6.77e-34FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_96663f62a86fe5e1b00bfaea23e1576cp@chr9:35685445..35685517, +
1.12e-33FFCP PHASE2:Hg19::chr10:49813013..49813032,-#_5627de66062f9ddc4400518aa27664dfp3@ARHGAP22
1.12e-33FFCP PHASE1:Hg19::chr10:49813013..49813032,-#_5627de66062f9ddc4400518aa27664dfp3@ARHGAP22
3.31e-33FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_6a0861a477e610260938c7ded945f614p@chr9:35684475..35684520, +
3.31e-33FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_6a0861a477e610260938c7ded945f614p@chr9:35684475..35684520, +
3.72e-33FFCP PHASE2:Hg19::chr7:100773914..100773948,-#_27dbb3cbca7c6e5b41216eedbe36c766p@chr7:100773914..100773948, -
3.72e-33FFCP PHASE1:Hg19::chr7:100773914..100773948,-#_27dbb3cbca7c6e5b41216eedbe36c766p@chr7:100773914..100773948, -
8.81e-33FFCP PHASE2:Hg19::chr7:100773872..100773904,-#_3d24e30a06968b342c0a07492c0073c9p@chr7:100773872..100773904, -
8.81e-33FFCP PHASE1:Hg19::chr7:100773872..100773904,-#_3d24e30a06968b342c0a07492c0073c9p@chr7:100773872..100773904, -
1.01e-32FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_47c0aeec286c0c9c8b6021c53d572d69p2@LRRC17
1.01e-32FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_47c0aeec286c0c9c8b6021c53d572d69p2@LRRC17
3.94e-32FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_f4d9d4ba5ce862879165fe86a66909aep@chr7:96658543..96658553, -
3.94e-32FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_f4d9d4ba5ce862879165fe86a66909aep@chr7:96658543..96658553, -
1.0e-31FFCP PHASE2:Hg19::chr9:35685273..35685313,+#_9727133719a51a3f5f82e3757a83a7d4p@chr9:35685273..35685313, +
1.0e-31FFCP PHASE1:Hg19::chr9:35685273..35685313,+#_9727133719a51a3f5f82e3757a83a7d4p@chr9:35685273..35685313, +
1.33e-31FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_f7f57bc561d637b55d81fe562a696293p@chr7:91081998..91082010, -
1.33e-31FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_f7f57bc561d637b55d81fe562a696293p@chr7:91081998..91082010, -
1.33e-31FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_f7f57bc561d637b55d81fe562a696293p2@Il6
1.33e-31FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_f7f57bc561d637b55d81fe562a696293p2@Il6
1.59e-31FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_3b06ccbd7a9cfb1019f2f5ddc66ce21bp@chr10:67598037..67598049, -
1.59e-31FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_3b06ccbd7a9cfb1019f2f5ddc66ce21bp@chr10:67598037..67598049, -
1.98e-31FFCP PHASE2:Hg19::chr11:62342375..62342471,-#_1d5b551cedd6e23830bde919a7601062p3@EEF1G
1.98e-31FFCP PHASE1:Hg19::chr11:62342375..62342471,-#_1d5b551cedd6e23830bde919a7601062p3@EEF1G
2.72e-31FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_5e4d8fccce008c2262250a3b66fd5848p@chr2:65009852..65009866, -
2.72e-31FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_5e4d8fccce008c2262250a3b66fd5848p@chr2:65009852..65009866, -
2.8e-31FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_73de1ce114439dc3bb3f345a15015399p@chr18:52678391..52678395, -
2.8e-31FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_73de1ce114439dc3bb3f345a15015399p@chr18:52678391..52678395, -
3.43e-31FFCP PHASE2:Hg19::chr7:99686632..99686645,+#_a8a3ae411a0bbe32c9943ce9217ef6c3p2@COPS6
3.43e-31FFCP PHASE1:Hg19::chr7:99686632..99686645,+#_a8a3ae411a0bbe32c9943ce9217ef6c3p2@COPS6
4.03e-31FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_83d2c8f919185c8fe09ec68623b4d816p1@LRRC17
4.03e-31FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_83d2c8f919185c8fe09ec68623b4d816p1@LRRC17
4.23e-31FFCP PHASE1:Hg19::chr7:100771785..100771826,+#_3973f070e75bf364a5e6c7d31ba5879fp5@SERPINE1
4.23e-31FFCP PHASE2:Hg19::chr7:100771785..100771826,+#_3973f070e75bf364a5e6c7d31ba5879fp5@SERPINE1
7.65e-31FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_3934fb36f96dbebe24fb45e787e964d4p@chr6:91222095..91222107, +
7.65e-31FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_3934fb36f96dbebe24fb45e787e964d4p@chr6:91222095..91222107, +
8.47e-31FFCP PHASE2:Hg19::chr12:53491743..53491754,+#_8dbfeaee196f30baf5ad673fc45cb7c2p1@AK074416
8.47e-31FFCP PHASE1:Hg19::chr12:53491743..53491754,+#_8dbfeaee196f30baf5ad673fc45cb7c2p1@AK074416
8.99e-31FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_89c84fe164d0eb50b927a909e708cf90p@chr9:35689148..35689192, +
8.99e-31FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_89c84fe164d0eb50b927a909e708cf90p@chr9:35689148..35689192, +
9.87e-31FFCP PHASE1:Hg19::chr7:100771879..100771926,-#_5640995dddeff96328d0fba14e1993b0p@chr7:100771879..100771926, -
9.87e-31FFCP PHASE2:Hg19::chr7:100771879..100771926,-#_5640995dddeff96328d0fba14e1993b0p@chr7:100771879..100771926, -
1.01e-30FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_2e2365ffa60994ab8a703a1c72f63c3ap9@Kctd10
1.01e-30FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_2e2365ffa60994ab8a703a1c72f63c3ap9@Kctd10
1.15e-30FFCP PHASE1:Hg19::chr7:100781252..100781342,+#_e6e3cb25c3cc82ba80213cf68af6ad69p@chr7:100781252..100781342, +
1.15e-30FFCP PHASE2:Hg19::chr7:100781252..100781342,+#_e6e3cb25c3cc82ba80213cf68af6ad69p@chr7:100781252..100781342, +
1.17e-30FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_f5b2f5be9fd856c594aec8de5147f2bep6@Gpr39
1.17e-30FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_f5b2f5be9fd856c594aec8de5147f2bep6@Gpr39
1.29e-30FFCP PHASE2:Hg19::chr7:100771827..100771882,+#_8ecd9cc55293517248d8170cd6c2bf2ep4@SERPINE1
1.29e-30FFCP PHASE1:Hg19::chr7:100771827..100771882,+#_8ecd9cc55293517248d8170cd6c2bf2ep4@SERPINE1
2.09e-30FFCP PHASE2:Hg19::chr4:74864386..74864404,-#_96348a16f5083e1f363606b5827cc976p1@CXCL5
2.09e-30FFCP PHASE1:Hg19::chr4:74864386..74864404,-#_96348a16f5083e1f363606b5827cc976p1@CXCL5
3.01e-30FFCP PHASE1:Hg19::chr16:128274..128286,+#_a927a5454f835a204b1865eb866cfe3dp2@MPG
3.01e-30FFCP PHASE2:Hg19::chr16:128274..128286,+#_a927a5454f835a204b1865eb866cfe3dp2@MPG

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0007503&oldid=3274582"