FFCP PHASE1:Hg19::chrX:131157290..131157309,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51765 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q9P289 | |||
|association_with_transcript=0bp_to_ENST00000394334_5end | |||
|coexpression_cluster_id=C4849 | |||
|description=CAGE_peak_2_at_MST4_5end | |||
|id=chrX:131157290..131157309,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.06e-49!172;CL:0000566!2.06e-49!172;CL:0002032!9.33e-47!165;CL:0000837!9.33e-47!165;CL:0000988!3.45e-45!182;CL:0000738!9.24e-36!140;CL:0002087!1.55e-30!119;CL:0002031!2.07e-30!124;CL:0000763!2.02e-29!112;CL:0000049!2.02e-29!112;CL:0000766!1.38e-19!76;CL:0000860!1.51e-18!45;CL:0002057!6.63e-18!42;CL:0000557!4.71e-16!71;CL:0000839!1.94e-15!70;CL:0000542!3.20e-15!53;CL:0000051!3.20e-15!53;CL:0000838!3.63e-15!52;CL:0002194!4.64e-14!63;CL:0000576!4.64e-14!63;CL:0000040!4.64e-14!63;CL:0000559!4.64e-14!63;CL:0002009!8.38e-14!65;CL:0000063!4.14e-09!578;CL:0000945!3.02e-08!24;CL:0000826!3.02e-08!24;CL:0000084!4.97e-07!25;CL:0000827!4.97e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.81e-14;33!CL:0002057;3.81e-14;33!CL:0000576;5.52e-11;48!CL:0002087;7.32e-11;104!CL:0000763;1.16e-10;100!CL:0000473;5.41e-10;39!CL:0000234;5.41e-10;39!CL:0000766;1.27e-09;69!CL:0000542;5.43e-09;53!CL:0000988;1.10e-08;177!CL:0000945;2.64e-08;24!CL:0000738;4.53e-08;136!CL:0000084;4.58e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.50e-49,168;CL:0002032,6.99e-47,161;CL:0000837,6.99e-47,161;CL:0000988,5.63e-46,177;CL:0000738,8.33e-36,136;CL:0002087,1.42e-30,115;CL:0002031,2.01e-30,120;CL:0000763,1.81e-29,108;CL:0000049,1.81e-29,108;CL:0000766,1.37e-19,72;CL:0000860,4.55e-18,42;CL:0002057,4.55e-18,42;CL:0000557,5.55e-16,67;CL:0000473,1.73e-15,48;CL:0000234,1.73e-15,48;CL:0000542,2.34e-15,53;CL:0000051,2.34e-15,53;CL:0000839,2.34e-15,66;CL:0000838,2.65e-15,52;CL:0002194,5.66e-14,59;CL:0000576,5.66e-14,59;CL:0000040,5.66e-14,59;CL:0000559,5.66e-14,59;CL:0002009,1.07e-13,61;CL:0000945,2.59e-08,24;CL:0000826,2.59e-08,24;CL:0000084,4.38e-07,25;CL:0000827,4.38e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-13;42!CL:0000051;5.43e-09;53!CL:0000049;1.82e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!2.56e-16!51;DOID:0060083!2.56e-16!51;DOID:162!3.33e-15!235;DOID:14566!9.06e-15!239;DOID:1240!4.59e-14!39;DOID:8692!3.47e-12!31;DOID:0050686!5.75e-11!137;DOID:305!1.13e-09!106;DOID:0050687!2.12e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.98e-12;31!DOID:1240;2.83e-11;39!DOID:2531;1.24e-10;51!DOID:0060083;1.24e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.82e-16,51;DOID:0060083,1.82e-16,51;DOID:162,6.77e-16,235;DOID:14566,1.91e-15,239;DOID:1240,3.44e-14,39;DOID:8692,2.72e-12,31;DOID:0050686,2.52e-11,137;DOID:305,8.92e-10,106;DOID:0050687,1.04e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.10e-18!102;UBERON:0003061!6.10e-18!102;UBERON:0002193!1.00e-13!112;UBERON:0002371!3.94e-13!80;UBERON:0001474!8.64e-13!86;UBERON:0004765!4.35e-10!101;UBERON:0001434!4.35e-10!101;UBERON:0002405!4.47e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.93e-18,98;UBERON:0003061,8.93e-18,98;UBERON:0002193,8.83e-14,108;UBERON:0002371,6.20e-13,76;UBERON:0001474,1.18e-12,82;UBERON:0004765,1.03e-11,90;UBERON:0002405,1.18e-10,93;UBERON:0001434,1.78e-09,100 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0,0,0,1.26343974685366,0.522371256399677,2.7030733015166,2.09340350391728,2.18441372130172,1.58260186937072,1.60896258848061,0,0.672325146451775,0.602694528023977,1.46062018077475,0,0.369363174230364,1.22400414746552,0.626909442956176,2.57612388417951,3.01123735160345,3.76627918784408,23.2296753473772,22.2492597409353,22.0390187678302,11.4075640286182,20.7267874972495,11.7660253720218,6.43594857135249,3.0120591877825,2.9580320813343,12.4722192934286,11.800046296456,14.6800219667424,18.281848481552,29.8811226730511,29.7304892880717,3.35873211359887,6.15397965436061,3.8636335145128,12.358850296263,9.82477453590904,9.21819432513701,12.7835970298127,15.2132118568076,20.4406204790768,17.8369283239733,18.6997315766243,22.4658118394156,24.4769433322999,21.9464792418501,23.0225027210381,10.7298133539285,8.18718450173537,15.0564734578207,19.2832852193669,21.5022448140983,23.0161365287655,10.8850929061616,17.1538745554603,10.2293940127847,49.0453613282307,61.8449894913342,71.0017363854955,16.8336605722018,18.7733850631273,18.2438629552298,49.0373597133029,57.4513112140601,65.824176587704,11.1965301745329,11.0554235981823,7.54771123830153,7.86300418025466,7.35866774923381,9.96498637521897,6.84030584978997,11.139333923149,10.4118567645841,3.51992488922645,11.4689108365048,8.89509253863555,8.10787422876364,10.0098996759003,14.3688109988621,8.59358334620321,3.81621501814146,14.2303242277362,15.8554041130153,10.7036503875064,15.8605594294831,19.6177997043538,11.0621315605532,10.8190373562608,12.5763444079733,11.308082444973,7.69057878797119,9.12582346574053,8.5220605032252,5.84480185223734,8.35578426638802,6.48132996444642,7.53215241584312,6.77009659412539,7.30120522436348,6.37290803043403,8.55077103939116,10.7776506936481,9.27369874352168,12.0112116161269,13.9121230606651,20.9071047609954,10.197840842781,6.89796888483458,11.3397057009268,14.6751421371312,10.1940932583711,15.626002892554,9.50452044448374,7.52875595388864,9.08704939196371,7.49584359314075,12.5491943583329,9.85353596305256,16.9349664308775,11.7673686144743,14.1927915805143,4.87613732627923,1.34140171940727,1.79007586580942,1.80719576192283,3.00802746381534,3.91085601194224,7.15757352345989,14.1124112387764,3.87592750372678,3.54767035940102,3.42555664203192,1.76821751921912,2.5500670180478,5.93255108455087,2.59637914923747,3.48259474598534,2.79211717089617,9.53962497221368,10.8679033048224,5.57186251994347,0,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,2.13459757612026,1.00416183829401,0,0,0,0,0.81014194788176,2.94689103337463,3.59246996201872,2.70267553159973,1.53316637465883,2.84779697870439,1.09921046358244,23.7204751384914,31.022421131866,3.92484646928281,1.49091585508596,1.13967460498122,0.794455084879313,0,3.54668382198357,1.12135520028461,2.1349799145941,1.72667283892012,0.933633106199299,1.61652806483626,1.63461903113459,0,0.576175924479999,0.70296429550139,2.49728061464256,2.2818872861778,2.98897361103602,5.87172493218824,2.91371299862637,2.24721290723598,0.816616685019573,3.4393608847295,1.54988671763648,1.18800285728205,1.48360157567134,0,2.15585442544872,4.20840284885166,5.63033339423839,1.6623846929051,1.31693286264251,1.83892677479412,2.40380894250555,4.08355859376076,0.717558542755448,0,0.635795703478686,1.20036438433761,0.515262646192195,0.772921620136887,0.744467425326359,0.337552664482532,0,0.252433774244115,0.276149695926898,0.80823028409406,1.77504796258307,1.41052937518696,1.69560592310488,8.31021668602176,6.2731607735892,9.46455164783713,34.7625062469347,44.9275914609835,29.1646796602491,26.2262469188887,35.8295608243392,48.5419887570854,0,1.92972281457866,2.76269842704961,1.39310378409594,0,11.4757596038649,15.6783761772635,14.7016728228924,12.3529249460281,12.854887201452,9.25355414533277,13.0786368915359,16.6788245356544,11.9271618653381,0,0,2.057870056657,1.47008711385542,2.53510069643662,0.982827216677626,1.77236972004421,10.5951143859516,8.60919069801795,2.74508496477641,6.14601598288303,8.99214026060957,11.4603028549259,10.2773174125968,1.3032332212413,0,1.44331342025273,2.89826012437692,2.46558257895225,0,0,0,5.53143078571493,2.57545848628462,3.44703808522356,1.40402559083543,4.16167254408439,7.49870671894216,7.0552493843521,12.1926583628452,12.0904005648845,14.5316969256981,10.3513323374607,53.7002929306578,8.27655279724325,14.9276243189356,16.1414347826997,10.9830917080951,1.52394946301206,3.05590740446622,1.17217447210047,0,3.90744472272629,0,4.28739648945867,0.672786506072164,2.61576041299968,2.86019314701705,5.17086863031111,0,2.535908257668,0.26593811658487,0,2.82928111688356,4.25547396069835,1.8649552531127,1.42977993658148,1.62786481617433,0,3.90883421152482,0.710783897485092,4.75171123760058,9.34462068884717,4.35766729300147,55.4850101060417,4.86495122564762,2.51128545716063,2.10833939483032,1.4377491329495,1.14861935834114,1.42636905040718,2.89562613335158,2.87666851570537,4.29746311775749,10.3118332474045,20.2941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| |||
|short_description=p2@MST4 | |||
}} |
Revision as of 06:56, 23 January 2014
Short description: | p2@MST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MST4_5end |
Coexpression cluster: | C4849_CD14_Mesothelial_Mast_acute_lymphoma_rhabdomyosarcoma_H9 |
Association with transcript: | 0bp_to_ENST00000394334_5end |
EntrezGene: | MST4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.50e-49 | 168 |
hematopoietic oligopotent progenitor cell | 6.99e-47 | 161 |
hematopoietic multipotent progenitor cell | 6.99e-47 | 161 |
hematopoietic cell | 5.63e-46 | 177 |
leukocyte | 8.33e-36 | 136 |
nongranular leukocyte | 1.42e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 2.01e-30 | 120 |
myeloid cell | 1.81e-29 | 108 |
common myeloid progenitor | 1.81e-29 | 108 |
myeloid leukocyte | 1.37e-19 | 72 |
classical monocyte | 4.55e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.55e-18 | 42 |
granulocyte monocyte progenitor cell | 5.55e-16 | 67 |
defensive cell | 1.73e-15 | 48 |
phagocyte | 1.73e-15 | 48 |
lymphocyte | 2.34e-15 | 53 |
common lymphoid progenitor | 2.34e-15 | 53 |
myeloid lineage restricted progenitor cell | 2.34e-15 | 66 |
lymphoid lineage restricted progenitor cell | 2.65e-15 | 52 |
monopoietic cell | 5.66e-14 | 59 |
monocyte | 5.66e-14 | 59 |
monoblast | 5.66e-14 | 59 |
promonocyte | 5.66e-14 | 59 |
macrophage dendritic cell progenitor | 1.07e-13 | 61 |
lymphocyte of B lineage | 2.59e-08 | 24 |
pro-B cell | 2.59e-08 | 24 |
T cell | 4.38e-07 | 25 |
pro-T cell | 4.38e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.93e-18 | 98 |
blood island | 8.93e-18 | 98 |
hemolymphoid system | 8.83e-14 | 108 |
bone marrow | 6.20e-13 | 76 |
bone element | 1.18e-12 | 82 |
skeletal element | 1.03e-11 | 90 |
immune system | 1.18e-10 | 93 |
skeletal system | 1.78e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.82e-16 | 51 |
immune system cancer | 1.82e-16 | 51 |
cancer | 6.77e-16 | 235 |
disease of cellular proliferation | 1.91e-15 | 239 |
leukemia | 3.44e-14 | 39 |
myeloid leukemia | 2.72e-12 | 31 |
organ system cancer | 2.52e-11 | 137 |
carcinoma | 8.92e-10 | 106 |
cell type cancer | 1.04e-07 | 143 |