FFCP PHASE1:Hg19::chrX:130423386..130423397,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5948 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N6C5 | |||
|association_with_transcript=5bp_to_ENST00000370903,NM_001170961,NM_001170962,NM_001555,NM_205833_5end | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_6_at_IGSF1_5end | |||
|id=chrX:130423386..130423397,- | |||
|ontology_enrichment_celltype=CL:0002322!2.03e-18!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.43e-11;7!CL:0000586;9.43e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.99e-11,7;CL:0000586,8.99e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-20!57;UBERON:0005068!1.14e-20!57;UBERON:0006241!1.14e-20!57;UBERON:0007135!1.14e-20!57;UBERON:0007023!8.05e-20!115;UBERON:0003075!1.69e-18!86;UBERON:0007284!1.69e-18!86;UBERON:0005743!2.48e-18!86;UBERON:0001017!9.25e-18!82;UBERON:0002346!2.01e-17!90;UBERON:0000473!8.17e-17!8;UBERON:0003135!2.75e-16!11;UBERON:0000073!4.44e-16!94;UBERON:0001016!4.44e-16!94;UBERON:0002616!1.46e-15!59;UBERON:0000955!1.74e-12!69;UBERON:0006238!1.74e-12!69;UBERON:0002780!4.87e-12!41;UBERON:0001890!4.87e-12!41;UBERON:0006240!4.87e-12!41;UBERON:0003080!1.08e-11!42;UBERON:0003056!1.95e-11!61;UBERON:0003076!2.34e-11!15;UBERON:0003057!2.34e-11!15;UBERON:0000007!2.51e-09!2;UBERON:0001893!2.20e-08!34;UBERON:0004121!3.01e-08!169;UBERON:0000924!6.28e-08!173;UBERON:0006601!6.28e-08!173;UBERON:0000033!6.85e-08!123;UBERON:0003101!1.27e-07!22;UBERON:0000079!1.27e-07!22;UBERON:0004733!1.81e-07!12;UBERON:0002028!1.81e-07!12;UBERON:0007277!1.81e-07!12;UBERON:0000153!2.56e-07!129;UBERON:0007811!2.56e-07!129;UBERON:0001869!3.00e-07!32;UBERON:0002791!4.57e-07!33;UBERON:0004732!7.19e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.43e-131;2!UBERON:0003296;2.83e-66;4!UBERON:0010133;2.83e-66;4!UBERON:0001894;1.64e-38;7!UBERON:0000473;1.41e-09;8!UBERON:0002368;1.22e-08;33!UBERON:0003135;2.55e-07;11!UBERON:0002780;4.38e-07;41!UBERON:0001890;4.38e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.99e-131,2;UBERON:0003296,3.35e-66,4;UBERON:0010133,3.35e-66,4;UBERON:0001894,1.80e-38,7;UBERON:0006222,1.80e-38,7;UBERON:0000473,1.35e-09,8;UBERON:0002368,1.14e-08,35;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41;UBERON:0003135,2.47e-07,11;UBERON:0000949,5.58e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.709048640765013,0.576911008668165,0.404421263125109,0,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,1.21393120847326,6.60220354918763,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32585478664576,0.26721740526556,0.0918948995348449,0,0.227336094654718,0.267964130156178,0.829169439458779,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@IGSF1 | |||
}} |
Revision as of 06:56, 23 January 2014
Short description: | p6@IGSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IGSF1_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 5bp_to_ENST00000370903, NM_001170961, NM_001170962, NM_001555, NM_205833_5end |
EntrezGene: | IGSF1 |
HGNC: | 5948 |
UniProt: | Q8N6C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.99e-11 | 7 |
germ cell | 8.99e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.99e-131 | 2 |
gland of diencephalon | 3.35e-66 | 4 |
neuroendocrine gland | 3.35e-66 | 4 |
diencephalon | 1.80e-38 | 7 |
future diencephalon | 1.80e-38 | 7 |
testis | 1.35e-09 | 8 |
endocrine gland | 1.14e-08 | 35 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |
male reproductive organ | 2.47e-07 | 11 |
endocrine system | 5.58e-07 | 45 |