FFCP PHASE1:Hg19::chrX:45606151..45606166,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=407006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31601 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-457bp_to_NR_029635,uc011mle.1_5end | |||
|coexpression_cluster_id=C1554 | |||
|description=CAGE_peak_2_at_MIR221_5end | |||
|id=chrX:45606151..45606166,- | |||
|ontology_enrichment_celltype=CL:0002620!5.08e-10!23;CL:0000057!1.87e-08!75;CL:0002057!4.23e-08!42;CL:0000860!1.30e-07!45;CL:0000134!5.83e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-20;33!CL:0002057;1.60e-20;33!CL:0000473;1.30e-14;39!CL:0000234;1.30e-14;39!CL:0002620;1.15e-12;23!CL:0000576;1.11e-10;48!CL:0000135;8.89e-08;3!CL:0000388;8.89e-08;3!CL:0000766;1.85e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.78e-18,42;CL:0002057,2.78e-18,42;CL:0000473,4.53e-17,48;CL:0000234,4.53e-17,48;CL:0002009,1.39e-14,61;CL:0002194,8.17e-14,59;CL:0000576,8.17e-14,59;CL:0000040,8.17e-14,59;CL:0000559,8.17e-14,59;CL:0000557,9.69e-13,67;CL:0002620,2.78e-12,23;CL:0000839,9.50e-12,66;CL:0000766,2.20e-11,72;CL:0000134,1.97e-08,354;CL:0000057,3.28e-08,76;CL:0000135,4.47e-08,3;CL:0000388,4.47e-08,3;CL:0002320,5.27e-08,361;CL:0000219,1.44e-07,386;CL:0000763,3.46e-07,108;CL:0000049,3.46e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.53e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.62e-08;5!DOID:450;2.62e-08;5!DOID:66;2.62e-08;5!DOID:423;2.62e-08;5!DOID:0080000;2.62e-08;5!DOID:11722;2.62e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.61e-08,5;DOID:450,3.61e-08,5;DOID:66,3.61e-08,5;DOID:423,3.61e-08,5;DOID:0080000,3.61e-08,5;DOID:11722,3.61e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.12e-07!95;UBERON:0002371!5.25e-07!80;UBERON:0004765!8.58e-07!101;UBERON:0001434!8.58e-07!101;UBERON:0001474!8.80e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.89e-08;3!UBERON:0000043;8.89e-08;3!UBERON:0007845;8.89e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.15e-14,76;UBERON:0001474,9.27e-14,82;UBERON:0001434,5.21e-12,100;UBERON:0004765,6.50e-12,90;UBERON:0002390,2.40e-10,98;UBERON:0003061,2.40e-10,98;UBERON:0002405,2.62e-10,93;UBERON:0002193,8.97e-09,108;UBERON:0002204,1.17e-08,167;UBERON:0007846,4.47e-08,3;UBERON:0000043,4.47e-08,3;UBERON:0007845,4.47e-08,3;UBERON:0002384,5.97e-08,371;UBERON:0002097,6.76e-08,41 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0.408001382488506,0,0.286235987131057,0.547497700291537,0.251085279189606,0.152826811495903,0,0.157421562627358,1.18009283054671,0,0.928896739896456,0,0,0,0,0,0,0,0.401088894940283,1.51907609501096,0,0,0,0.145398238779565,0.755751887377619,0,0.697287110717054,0.822335776043652,2.47765096716083,2.3015391385772,1.2808035326455,2.12834006899727,3.44745680736619,1.29096936716765,0,0.752969358170419,1.09162460023138,0.674170453335254,10.4068523406107,7.70229664982625,8.31138263538754,0,0,0,7.83564944297177,2.26954089876456,9.34233373493363,7.03496262718881,6.25779502104242,1.08594422352558,1.81619850790011,3.31449872388808,4.74693581161327,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0,2.17269778441236,0,0,0.378139268656271,0.443458794925128,0.87834785693126,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,4.10468460520978,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,1.04614076386261,0.587172493218824,0.647491777472526,0.702254033511242,0.816616685019573,0.737005903870608,0.309977343527296,1.18800285728205,1.23633464639278,0,0,1.85169725349473,0.500474079487857,0,0.438977620880838,1.22595118319608,0.600952235626387,0,9.68704032719855,1.06778694409284,2.33125091275518,4.50136644126603,0.721367704669072,4.3798891807757,1.30281799432113,6.91982962189192,0.876933046450788,6.56327813034698,1.01254888506529,0.323292113637624,7.4552014428489,0.705264687593482,0.847802961552438,0,1.09098448236334,1.14721838155602,0.243947412259191,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0.648119116109707,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0,0.492663237895943,0.088048434013226,0.829312462163088,0.432359860250884,0.25248486685276,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,0.531876233169741,2.08014873822732,0.514414748524284,1.41849132023278,0.799266537048298,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0,0.499864955910285,0,0,2.10833939483032,0,0,1.42636905040718,0.868687840005475,0.821905290201534,1.25342674267927,0.112085143993527,0.197030760201927,0,0.256686072559497,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0,0,0,0.415941723061614,1.78428988797162,0,0.234282829985426,0,0,0,0,0,0.781952530212746,0,0,0.82707210449155,0.215714200818617,0,0,0,0,0.496215615637554,3.6830873589135,0.561320188866147,0.640695746278505,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.657017248110473,0,0.232420756919918,0.120859449591622,0.802025881213139,0.368323955743585,0.34444334449382,0.910455840033585,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0,0.308097234229289,0.460511024178389,0.689182862422653,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0.165284915360978,0,4.8492830747942,0.10115778085555,0,2.51849877464512,0,0,0,0,0,0.429374660225974,0.372158369359667,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0.54907405947211,0.353437207037059,0,0,0,0,0,0,0.682499557039929,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,1.06428319221179,0.211107635297664,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0.142283686696828,0.159426272728822,0,0.5745161103971,0.846694330895531,0.324621940274555,1.68478306868075,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0,0,0.852408440419239,0.71623345421307,0,0.307160702099232,0,0.281338832821026,1.11308705022906,0.16480387422676,0,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0.622079175323615,0.718946809178615,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0.724999575434793,0,0.762760950878299,0,0,0,0,0,0.482385754501632,0,0,0,0,0,1.11538995422883,0,0.113942055847001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| |||
|short_description=p2@MIR221 | |||
}} |
Revision as of 05:25, 23 January 2014
Short description: | p2@MIR221 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR221_5end |
Coexpression cluster: | C1554_Fibroblast_CD14_Mast_tenocyte_Small_oral_Synoviocyte |
Association with transcript: | -457bp_to_NR_029635, uc011mle.1_5end |
EntrezGene: | MIR221 |
HGNC: | 31601 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.78e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.78e-18 | 42 |
defensive cell | 4.53e-17 | 48 |
phagocyte | 4.53e-17 | 48 |
macrophage dendritic cell progenitor | 1.39e-14 | 61 |
monopoietic cell | 8.17e-14 | 59 |
monocyte | 8.17e-14 | 59 |
monoblast | 8.17e-14 | 59 |
promonocyte | 8.17e-14 | 59 |
granulocyte monocyte progenitor cell | 9.69e-13 | 67 |
skin fibroblast | 2.78e-12 | 23 |
myeloid lineage restricted progenitor cell | 9.50e-12 | 66 |
myeloid leukocyte | 2.20e-11 | 72 |
mesenchymal cell | 1.97e-08 | 354 |
fibroblast | 3.28e-08 | 76 |
fibrocyte | 4.47e-08 | 3 |
tendon cell | 4.47e-08 | 3 |
connective tissue cell | 5.27e-08 | 361 |
motile cell | 1.44e-07 | 386 |
myeloid cell | 3.46e-07 | 108 |
common myeloid progenitor | 3.46e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.15e-14 | 76 |
bone element | 9.27e-14 | 82 |
skeletal system | 5.21e-12 | 100 |
skeletal element | 6.50e-12 | 90 |
hematopoietic system | 2.40e-10 | 98 |
blood island | 2.40e-10 | 98 |
immune system | 2.62e-10 | 93 |
hemolymphoid system | 8.97e-09 | 108 |
musculoskeletal system | 1.17e-08 | 167 |
dense regular connective tissue | 4.47e-08 | 3 |
tendon | 4.47e-08 | 3 |
regular connective tissue | 4.47e-08 | 3 |
connective tissue | 5.97e-08 | 371 |
skin of body | 6.76e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.61e-08 | 5 |
myotonic disease | 3.61e-08 | 5 |
muscle tissue disease | 3.61e-08 | 5 |
myopathy | 3.61e-08 | 5 |
muscular disease | 3.61e-08 | 5 |
myotonic dystrophy | 3.61e-08 | 5 |