FFCP PHASE1:Hg19::chrX:15683147..15683159,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57393 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29437 | |||
|TSSclassifier=weak | |||
|UniProt=Q9HBJ8 | |||
|association_with_transcript=0bp_to_ENST00000380342,NM_020665,uc004cxc.1_5end | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_3_at_TMEM27_5end | |||
|id=chrX:15683147..15683159,- | |||
|ontology_enrichment_celltype=CL:0002621!7.86e-14!3;CL:0002166!1.32e-13!3;CL:0000066!7.56e-13!254;CL:0002076!6.92e-12!43;CL:0000223!1.59e-09!59;CL:0002251!2.78e-09!21;CL:0000076!4.01e-09!62 | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.27e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.61e-34,2;CL:0000076,1.74e-10,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.76e-36!14;DOID:305!2.34e-14!106;DOID:0050687!2.53e-09!143;DOID:3908!1.50e-08!5;DOID:4556!5.64e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.85e-43;14!DOID:4556;2.93e-23;3!DOID:3908;1.50e-14;5!DOID:4362;1.50e-14;5!DOID:3905;1.08e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.85e-43,14;DOID:4556,3.27e-23,3;DOID:4362,1.40e-14,5;DOID:3908,1.60e-14,5;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001949!7.86e-14!3;UBERON:0003343!9.40e-11!4;UBERON:0004785!9.40e-11!4;UBERON:0000161!1.59e-10!35;UBERON:0001708!2.54e-10!4;UBERON:0001704!2.54e-10!4;UBERON:0001004!5.09e-10!72;UBERON:0000166!2.41e-09!21;UBERON:0004807!1.06e-08!28;UBERON:0003729!1.11e-08!5;UBERON:0004119!9.41e-08!169;UBERON:0000925!9.41e-08!169;UBERON:0006595!9.41e-08!169;UBERON:0000974!3.52e-07!10;UBERON:0005911!4.34e-07!82;UBERON:0002090!5.15e-07!6;UBERON:0000165!9.26e-07!28;UBERON:0000930!9.26e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.27e-34;2!UBERON:0004801;4.27e-34;2!UBERON:0000002;2.31e-12;6!UBERON:0001560;2.31e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.61e-34,2;UBERON:0004801,3.61e-34,2;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,2.96001302373369,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.236417121897595,0,0,0.35857467866569,2.30298236783334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0,0.550285795565037,0.346576998451015,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0,0,0,0.407016343054873,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TMEM27 | |||
}} |
Revision as of 04:55, 23 January 2014
Short description: | p3@TMEM27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM27_5end |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | 0bp_to_ENST00000380342, NM_020665, uc004cxc.1_5end |
EntrezGene: | TMEM27 |
HGNC: | 29437 |
UniProt: | Q9HBJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.61e-34 | 2 |
squamous epithelial cell | 1.74e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.61e-34 | 2 |
cervix epithelium | 3.61e-34 | 2 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.85e-43 | 14 |
lung large cell carcinoma | 3.27e-23 | 3 |
cervical cancer | 1.40e-14 | 5 |
non-small cell lung carcinoma | 1.60e-14 | 5 |
lung carcinoma | 1.12e-08 | 9 |