FFCP PHASE1:Hg19::chrX:13309411..13309439,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4051 | |||
|description=CAGE_peak_at_chrX:13309411..13309439,+ | |||
|id=chrX:13309411..13309439,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.38e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.31e-08;2!CL:0000137;2.31e-08;2!CL:0000092;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.31e-08,2;CL:0000137,2.31e-08,2;CL:0000092,2.31e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.56e-15;1 | |||
|ontology_enrichment_disease=DOID:1036!3.40e-18!8;DOID:0060085!3.71e-10!1;DOID:3165!3.71e-10!1;DOID:0060121!3.71e-10!1;DOID:2438!3.71e-10!1;DOID:4418!3.71e-10!1;DOID:8692!5.06e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.89e-29;8!DOID:0060085;2.06e-15;1!DOID:3165;2.06e-15;1!DOID:0060121;2.06e-15;1!DOID:2438;2.06e-15;1!DOID:4418;2.06e-15;1!DOID:200;2.31e-08;2!DOID:4305;2.31e-08;2!DOID:8692;6.07e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.89e-29,8;DOID:0060085,2.06e-15,1;DOID:3165,2.06e-15,1;DOID:0060121,2.06e-15,1;DOID:2438,2.06e-15,1;DOID:4418,2.06e-15,1;DOID:200,2.31e-08,2;DOID:4305,2.31e-08,2;DOID:8692,1.08e-07,31;DOID:2531,5.38e-07,51;DOID:0060083,5.38e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.38e-12!3;UBERON:0000920!2.38e-12!3;UBERON:0003124!1.18e-11!7;UBERON:0001282!1.98e-10!1;UBERON:0009842!1.98e-10!1;UBERON:0003704!1.98e-10!1;UBERON:0001171!1.98e-10!1;UBERON:0001172!1.98e-10!1;UBERON:0005631!4.64e-10!14;UBERON:0000158!4.64e-10!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;7.46e-16;1!UBERON:0009842;7.46e-16;1!UBERON:0003704;7.46e-16;1!UBERON:0001171;7.46e-16;1!UBERON:0001172;7.46e-16;1!UBERON:0000473;5.96e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.46e-16,1;UBERON:0009842,7.46e-16,1;UBERON:0003704,7.46e-16,1;UBERON:0001171,7.46e-16,1;UBERON:0001172,7.46e-16,1;UBERON:0003124,6.06e-09,7;UBERON:0000473,5.96e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,24.8789069586503,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5484990123513,10.1448117930746,0,0,0,0.0915975934018623,3.19820865611181,0,0,0,16.0172919038198,15.8810652797369,16.6143371106084,27.5142912450068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74344291493155,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81420191699347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.2759838745005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28823786971007,10.1826369459348,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:13309411..13309439,+ | |||
}} |
Revision as of 04:51, 23 January 2014
Short description: | p@chrX:13309411..13309439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:13309411..13309439, + |
Coexpression cluster: | C4051_small_chronic_adrenal_testis_cholangiocellular_epidermoid_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.31e-08 | 2 |
osteocyte | 2.31e-08 | 2 |
osteoclast | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.46e-16 | 1 |
acinus | 7.46e-16 | 1 |
intrahepatic bile duct | 7.46e-16 | 1 |
portal lobule | 7.46e-16 | 1 |
hepatic acinus | 7.46e-16 | 1 |
chorion | 6.06e-09 | 7 |
testis | 5.96e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.89e-29 | 8 |
organ system benign neoplasm | 2.06e-15 | 1 |
skin benign neoplasm | 2.06e-15 | 1 |
integumentary system benign neoplasm | 2.06e-15 | 1 |
dermis tumor | 2.06e-15 | 1 |
cutaneous fibrous histiocytoma | 2.06e-15 | 1 |
giant cell tumor | 2.31e-08 | 2 |
bone giant cell tumor | 2.31e-08 | 2 |
myeloid leukemia | 1.08e-07 | 31 |
hematologic cancer | 5.38e-07 | 51 |
immune system cancer | 5.38e-07 | 51 |