FFCP PHASE1:Hg19::chr9:139873342..139873374,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9592 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000460340_5end | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_6_at_PTGDS_5end | |||
|id=chr9:139873342..139873374,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.57e-08!7;CL:0000586!2.57e-08!7;CL:0002322!7.32e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.49e-14;5!CL:0000784;1.38e-13;3!CL:0000039;1.52e-10;7!CL:0000586;1.52e-10;7!CL:0002575;5.74e-10;2!CL:0002541;2.36e-07;3!CL:0002321;7.64e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.02e-13,5;CL:0000784,2.60e-13,3;CL:0000039,1.16e-10,7;CL:0000586,1.16e-10,7;CL:0002575,6.02e-10,2;CL:0002541,2.36e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.47e-07;10!UBERON:0005564;3.47e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;8.92e-07;22!DOID:2994;8.92e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.34e-07,22;DOID:2994,7.34e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-16!115;UBERON:0005743!6.24e-15!86;UBERON:0000073!4.78e-14!94;UBERON:0001016!4.78e-14!94;UBERON:0001017!2.68e-13!82;UBERON:0001049!2.27e-12!57;UBERON:0005068!2.27e-12!57;UBERON:0006241!2.27e-12!57;UBERON:0007135!2.27e-12!57;UBERON:0002616!2.06e-11!59;UBERON:0000955!7.96e-11!69;UBERON:0006238!7.96e-11!69;UBERON:0002020!7.64e-10!34;UBERON:0003528!7.64e-10!34;UBERON:0003075!2.31e-09!86;UBERON:0007284!2.31e-09!86;UBERON:0002346!2.64e-09!90;UBERON:0002780!4.58e-09!41;UBERON:0001890!4.58e-09!41;UBERON:0006240!4.58e-09!41;UBERON:0003080!1.06e-08!42;UBERON:0001893!1.27e-08!34;UBERON:0001869!2.78e-08!32;UBERON:0002791!4.78e-08!33;UBERON:0002619!1.59e-07!22;UBERON:0001950!2.71e-07!20;UBERON:0003135!3.10e-07!11;UBERON:0000153!5.28e-07!129;UBERON:0007811!5.28e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.11e-07;10!UBERON:0000158;1.11e-07;10!UBERON:0003124;2.36e-07;3!UBERON:0000920;2.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.36e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.982343066232845,0,0,0,0,0,1.19245312152671,2.28797964312051,1.11437250398869,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,1.46368447355514,1.59035721985782,1.04574548582567,1.55491582523056,0.252320850875628,4.74470566798579,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.621984346622316,1.72943944100354,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06983588134496,1.37257369524342,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0,5.52889263778618,0,0.422008249231538,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.278304294485554,1.99613798001194,0,0,0,0,5.08507300585533,2.12748913591143,2.41320361269025,0,0,0,0.120596438625408,0,0.221158519862449,0.591095237907095,1.31631238292384,0,0,0.153900517007594,0,1.84451123510448,62.6508357980209,16.1884584163792,15.3120556671321,0,19.1892519366708,0,0,2.32696354660219,2.03036094555463,1.56850027454192,1.34257269580674,0.189753732724185,0.953619473882272,0.632994193584081,0.652931232636591,0,0.865554558968364,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0.61214552326098,0.31593289814244,0,0.103688191397247,0,0.661983911750998,0.627865836814451,0,0,0.277349346026277,7.98374796341602,0.587954384486266,0,0.17472666824203,0,0.0967563312890851,0.219267951258557,0.246346371159628,0,0,0.451961481561065,0,0,0.316553979779393,0.977756913674015,0.801588202515337,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.544813624446302,0.160753148465019,1.10031549277787,1.66176135211674,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0.79339561045614,0.171086837884329,0.704815022316672,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0.443716206147409,1.1177352529449,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,3.85239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,4.33775174906508,1.67593475391973,0,0,0,0,0,0.256916900385838,0,0.638535436228605,0.41023272848151,0,0.414943514785307,0.968853873791107,0,0,0.943757786781923,0,0,0,0,0,0.0752103283492573,0,0,31.1668966432893,0,0,0.270150338473579,0,0.620060389503552,0.824405532520789,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0.747667062745149,0.394636641377094,0.945550727071746,0,0.078493092850514,0.314231179832004,3.08299379645168,0,0,0,4.07416301806941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23040974977572,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0.11294608203896,0.109940516745429,0.754814217833368,0,0.218559560503957,0,0.245148321753905,0,0.981542335574726,0,0.4226557275834,0,0.281951753939561,0.128915775947154,0,0.178553938605658,0,0,0,0,1.00337708206016,0.473314686579554,0.203974470572744,0,0,0,0,0,0,0.98339014767326,0,0.203977659483963,0.26721740526556,0.0918948995348449,1.50424523575425,2.34913964476542,3.7514978221865,0,0.724030971033267,0,0.23806443146374,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.533636729388577,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@PTGDS | |||
}} |
Revision as of 04:13, 23 January 2014
Short description: | p6@PTGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTGDS_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 47bp_to_ENST00000460340_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.02e-13 | 5 |
plasmacytoid dendritic cell | 2.60e-13 | 3 |
germ line cell | 1.16e-10 | 7 |
germ cell | 1.16e-10 | 7 |
central nervous system pericyte | 6.02e-10 | 2 |
chorionic membrane mesenchymal stem cell | 2.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.34e-07 | 22 |
germ cell cancer | 7.34e-07 | 22 |