FFCP PHASE1:Hg19::chr9:137591859..137591883,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137591859..137591883,+ | |||
|id=chr9:137591859..137591883,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-30!180;CL:0000057!5.28e-19!75;CL:0000680!8.91e-13!57;CL:0000056!8.91e-13!57;CL:0000355!8.91e-13!57;CL:0000183!1.71e-12!59;CL:0000187!5.92e-12!54;CL:0000393!6.06e-10!60;CL:0000211!6.06e-10!60;CL:0000192!1.21e-09!42;CL:0000514!1.21e-09!42;CL:0002334!2.55e-08!12;CL:0000222!3.63e-08!119;CL:0000499!1.98e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.27e-11;19!CL:0000134;8.56e-11;55!CL:0002334;5.75e-10;12!CL:0000048;1.65e-09;58!CL:0000723;3.17e-09;61!CL:0002320;3.90e-08;188!CL:0000057;4.82e-08;73!CL:0002620;3.28e-07;23!CL:0000499;3.59e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.41e-23,76;CL:0000048,1.53e-14,427;CL:0000723,9.03e-14,433;CL:0000034,8.72e-13,441;CL:0000349,2.80e-11,19;CL:0002334,3.75e-10,12;CL:0002320,3.28e-09,361;CL:0000134,8.63e-09,354;CL:0000192,3.21e-08,43;CL:0000514,3.21e-08,43;CL:0000680,4.32e-08,58;CL:0000056,4.32e-08,58;CL:0000355,4.32e-08,58;CL:0000187,1.21e-07,55;CL:0000499,2.53e-07,28;CL:0002620,2.69e-07,23;CL:0000219,4.16e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.14e-13!63;UBERON:0001015!7.14e-13!63;UBERON:0000383!7.14e-13!63;UBERON:0001134!1.14e-12!61;UBERON:0002036!1.14e-12!61;UBERON:0003082!1.14e-12!61;UBERON:0000914!1.57e-11!83;UBERON:0002329!1.57e-11!83;UBERON:0003077!1.57e-11!83;UBERON:0003059!1.57e-11!83;UBERON:0007282!1.57e-11!83;UBERON:0009618!1.57e-11!83;UBERON:0007285!1.57e-11!83;UBERON:0004290!2.23e-11!70;UBERON:0000486!1.63e-09!82;UBERON:0004872!1.51e-08!84;UBERON:0000478!7.65e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.25e-09;24!UBERON:0002384;1.03e-07;198!UBERON:0003688;1.78e-07;6!UBERON:0002358;1.78e-07;6!UBERON:0003684;1.78e-07;6!UBERON:0001178;1.78e-07;6!UBERON:0004457;2.16e-07;9!UBERON:0000042;2.16e-07;9!UBERON:0003104;3.13e-07;7!UBERON:0009142;3.13e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.26e-09,371;UBERON:0000478,3.79e-09,24;UBERON:0002385,1.48e-08,64;UBERON:0001015,1.48e-08,64;UBERON:0000383,1.48e-08,64;UBERON:0001134,1.62e-08,62;UBERON:0002036,1.62e-08,62;UBERON:0003082,1.62e-08,62;UBERON:0007524,5.99e-08,73;UBERON:0002329,1.18e-07,71;UBERON:0003059,1.18e-07,71;UBERON:0007282,1.18e-07,71;UBERON:0004290,1.18e-07,71;UBERON:0009618,1.18e-07,71;UBERON:0003688,1.86e-07,6;UBERON:0002358,1.86e-07,6;UBERON:0003684,1.86e-07,6;UBERON:0001178,1.86e-07,6;UBERON:0003077,2.03e-07,72;UBERON:0007285,2.03e-07,72;UBERON:0007503,4.89e-07,78 | |||
|phase1_expression=3.63356758541113,8.99222200342129,4.65149533516705,7.00513088471913,11.1740273606822,5.23403114460221,5.06599756336621,0,0,0.737201809504527,0,2.40285509343189,5.53910654279752,0.123766352960047,2.65117900582333,2.6893005858071,1.80808358407193,1.46062018077475,1.46379839637152,0.369363174230364,1.22400414746552,2.19418305034661,0,0.136874425072884,2.13422487311165,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,7.31420598941885,5.36560687762909,0.895037932904712,1.80719576192283,2.50668955317945,5.06962816362883,5.5670016293577,19.9520296824081,0.567208902984407,2.66075276955077,1.93236528524877,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,0.825354125820202,0,0,0,0,0,0,0.24406205754817,0,11.3419872703446,0.17859945656816,0,0,0,0,0,0,0,0,8.44852317882041,2.5326102332916,3.04541115870403,27.5363155918861,5.67469411517371,2.80338800071154,2.1349799145941,13.3200476145266,1.24484414159907,2.2900814251847,1.9615428373615,2.72443369760877,8.06646294271999,0,0,0,0,0.822041490506354,0,0.140450806702248,0.816616685019573,0.491337269247072,1.85986406116378,2.37600571456411,4.69807165629258,0.910161361938026,5.03032699271367,0,1.00094815897571,0,1.75591048352335,5.82326812018137,1.65261864797256,0.907457465280168,8.61070251306537,2.56268866582281,2.96704661623387,11.4034616512073,3.40073346486848,8.50213782150576,2.79175284497385,3.03797398034279,5.55390929418832,9.84491719552046,3.31379635112278,4.20279747728911,9.58525899794859,2.82105875037393,1.01736355386293,0,0.272746120590835,0,0,0.265059536642971,0.580969714347592,0.414644220061482,0.252320850875628,0,3.12899064659632,5.14592750554308,0,0.928735856063958,0.721879481669586,1.0647612003586,1.01150814046861,0.241011029883482,1.54411561825352,0.653638332277218,0.71181185733329,0.943819157121151,0.196221465125346,0.38474715694639,0,0,2.057870056657,5.88034845542168,0,0,0.590789906681404,0,0.122988438543114,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.115930404975077,3.99189560401794,0,0,0,0.790204397959275,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,1.30788020649984,0.80672114403045,4.13669490424889,0,2.535908257668,0.531876233169741,0,0,1.41849132023278,0.532844358032199,4.43231780340257,18.9917561887005,3.29296134712308,0,2.13235169245527,6.33561498346743,0.602878754119172,0.871533458600294,1.29964888536674,0,0,0,2.87549826589899,1.14861935834114,0,1.88215698667853,2.05476322550383,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0,0.542530047399471,9.35868876888632,20.5193337116736,6.30809660135739,3.39710103478868,1.20378439891088,2.27407504055985,3.10419213877515,0,2.21243002250044,0.695068915744663,1.37060810223918,5.49029478097369,0,0,0,0.909382714338778,3.32870879020994,18.1434175997808,3.96972492510043,4.75732117192994,23.014127743512,7.04765320906355,3.58195074346692,9.16867350518563,4.45254199334973,4.78050050788232,3.72879623157567,0.410635780069046,5.19254429183621,2.90525946149898,0,0,0,1.7222167224691,1.82091168006717,2.62248829918848,0,0,0,0,0,0,0.340187410553031,1.29549549661284,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.309123034943167,2.93022287418699,0.082509499920588,0,0,8.03419649220798,0.580024309752732,0.308097234229289,0.767518373630648,0.964856007391714,0.966782203814463,2.61030049045611,0.767039646744908,1.4245125703478,0.826424576804891,0.384380134730212,0.510450849978337,0.2023155617111,2.32422774648643,21.0924272376529,0.6970372701606,0.308033580176089,0,0,0.55597265731176,1.00187420719394,1.48863347743867,2.21465597303108,3.62197368455267,0.511795582622668,1.71175595213568,1.27281299170375,0.78494864019923,1.43897966066652,6.31435168392926,2.12062324222236,0.404364963146632,0,0,1.46290121726877,3.65570234446927,0,0.9554993798559,6.6460553018245,2.26016233240486,3.30819206127675,4.64407282668854,1.31535265576129,0.578775534266688,1.9676842561399,2.43492452355245,0.92947049429925,1.97186921772569,0.573645408816206,1.67023369722306,1.78335525740625,1.41904425628239,2.32218398827431,2.96365403663912,0.379473173765715,2.44954304171488,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,4.7748896947538,2.07875276582847,6.14321404198464,0,0,0.222617410045812,0,0,0.398495976502139,0.552567831062295,0,0.409074730008619,0,3.11039587661807,0,0,0,0.394573622547734,0,0,0,0,0,1.04171104434093,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,1.61595542857974,1.02547850262301,0,0,0,4.78501739597879,2.56473261525214,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0,0,0,2.40773294189637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| |||
|short_description=p@chr9:137591859..137591883,+ | |||
}} |
Revision as of 04:00, 23 January 2014
Short description: | p@chr9:137591859..137591883, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137591859..137591883, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.41e-23 | 76 |
multi fate stem cell | 1.53e-14 | 427 |
somatic stem cell | 9.03e-14 | 433 |
stem cell | 8.72e-13 | 441 |
extraembryonic cell | 2.80e-11 | 19 |
preadipocyte | 3.75e-10 | 12 |
connective tissue cell | 3.28e-09 | 361 |
mesenchymal cell | 8.63e-09 | 354 |
smooth muscle cell | 3.21e-08 | 43 |
smooth muscle myoblast | 3.21e-08 | 43 |
muscle precursor cell | 4.32e-08 | 58 |
myoblast | 4.32e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.32e-08 | 58 |
muscle cell | 1.21e-07 | 55 |
stromal cell | 2.53e-07 | 28 |
skin fibroblast | 2.69e-07 | 23 |
motile cell | 4.16e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.26e-09 | 371 |
extraembryonic structure | 3.79e-09 | 24 |
muscle tissue | 1.48e-08 | 64 |
musculature | 1.48e-08 | 64 |
musculature of body | 1.48e-08 | 64 |
skeletal muscle tissue | 1.62e-08 | 62 |
striated muscle tissue | 1.62e-08 | 62 |
myotome | 1.62e-08 | 62 |
dense mesenchyme tissue | 5.99e-08 | 73 |
somite | 1.18e-07 | 71 |
presomitic mesoderm | 1.18e-07 | 71 |
presumptive segmental plate | 1.18e-07 | 71 |
dermomyotome | 1.18e-07 | 71 |
trunk paraxial mesoderm | 1.18e-07 | 71 |
omentum | 1.86e-07 | 6 |
peritoneum | 1.86e-07 | 6 |
abdominal cavity | 1.86e-07 | 6 |
visceral peritoneum | 1.86e-07 | 6 |
paraxial mesoderm | 2.03e-07 | 72 |
presumptive paraxial mesoderm | 2.03e-07 | 72 |
epithelial vesicle | 4.89e-07 | 78 |