FFCP PHASE1:Hg19::chr9:135457457..135457468,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56751 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=953 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZE3 | |||
|association_with_transcript=-103bp_to_ENST00000263610_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_4_at_BARHL1_5end | |||
|id=chr9:135457457..135457468,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.27e-10!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.36e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!4.59e-73!12;UBERON:0002028!4.59e-73!12;UBERON:0007277!4.59e-73!12;UBERON:0004732!1.89e-67!13;UBERON:0003076!1.84e-58!15;UBERON:0003057!1.84e-58!15;UBERON:0001896!7.79e-54!3;UBERON:0005290!7.79e-54!3;UBERON:0010096!7.79e-54!3;UBERON:0002298!3.72e-36!8;UBERON:0002680!8.43e-33!9;UBERON:0001895!8.43e-33!9;UBERON:0010092!8.43e-33!9;UBERON:0002037!4.92e-28!6;UBERON:0006215!4.92e-28!6;UBERON:0001049!5.31e-15!57;UBERON:0005068!5.31e-15!57;UBERON:0006241!5.31e-15!57;UBERON:0007135!5.31e-15!57;UBERON:0002616!1.72e-14!59;UBERON:0000955!3.36e-12!69;UBERON:0006238!3.36e-12!69;UBERON:0001017!2.93e-10!82;UBERON:0003075!6.82e-10!86;UBERON:0007284!6.82e-10!86;UBERON:0005743!8.91e-10!86;UBERON:0002346!1.93e-09!90;UBERON:0000073!7.81e-09!94;UBERON:0000063!7.81e-09!97;UBERON:0001016!7.81e-09!94;UBERON:0000988!1.93e-07!3;UBERON:0007023!2.18e-07!115;UBERON:0000033!9.23e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;2.36e-70;9!UBERON:0001895;2.36e-70;9!UBERON:0002037;1.35e-59;6!UBERON:0004733;4.92e-53;12!UBERON:0002028;4.92e-53;12!UBERON:0004732;4.92e-49;13!UBERON:0000988;1.40e-14;3!UBERON:0000073;5.76e-09;53!UBERON:0002616;5.76e-09;53!UBERON:0002298;5.92e-08;6!UBERON:0001016;4.64e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,2.16e-70,9;UBERON:0001895,2.16e-70,9;UBERON:0010092,2.16e-70,9;UBERON:0002037,1.22e-59,6;UBERON:0006215,1.22e-59,6;UBERON:0004733,4.61e-53,12;UBERON:0002028,4.61e-53,12;UBERON:0007277,4.61e-53,12;UBERON:0004732,4.63e-49,13;UBERON:0003076,1.18e-42,15;UBERON:0003057,1.18e-42,15;UBERON:0000988,1.40e-14,3;UBERON:0000073,1.93e-12,53;UBERON:0002616,1.93e-12,53;UBERON:0001049,7.99e-12,56;UBERON:0005068,7.99e-12,56;UBERON:0006241,7.99e-12,56;UBERON:0007135,7.99e-12,56;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0001017,2.54e-08,81;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0002346,5.76e-08,86;UBERON:0002298,5.92e-08,6;UBERON:0001016,1.45e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,1.52581736317083,3.31737779793674,3.84211904639612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67036558074891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@BARHL1 | |||
}} |
Revision as of 03:51, 23 January 2014
Short description: | p4@BARHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BARHL1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -103bp_to_ENST00000263610_5end |
EntrezGene: | BARHL1 |
HGNC: | 953 |
UniProt: | Q9BZE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 2.16e-70 | 9 |
metencephalon | 2.16e-70 | 9 |
future metencephalon | 2.16e-70 | 9 |
cerebellum | 1.22e-59 | 6 |
rhombic lip | 1.22e-59 | 6 |
segmental subdivision of hindbrain | 4.61e-53 | 12 |
hindbrain | 4.61e-53 | 12 |
presumptive hindbrain | 4.61e-53 | 12 |
segmental subdivision of nervous system | 4.63e-49 | 13 |
posterior neural tube | 1.18e-42 | 15 |
chordal neural plate | 1.18e-42 | 15 |
pons | 1.40e-14 | 3 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |
brainstem | 5.92e-08 | 6 |
nervous system | 1.45e-07 | 89 |