FFCP PHASE1:Hg19::chr9:118915915..118915930,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |||
|TSSclassifier=strong | |||
|UniProt=Q13219,Q7Z613,Q86YM8,Q8IWT8 | |||
|association_with_transcript=-140bp_to_NM_002581,uc004bjn.2_5end | |||
|coexpression_cluster_id=C4794 | |||
|description=CAGE_peak_12_at_PAPPA_5end | |||
|id=chr9:118915915..118915930,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.06e-28!180;CL:0000187!4.88e-24!54;CL:0000680!5.91e-23!57;CL:0000056!5.91e-23!57;CL:0000355!5.91e-23!57;CL:0000183!1.26e-21!59;CL:0000393!5.33e-20!60;CL:0000211!5.33e-20!60;CL:0000057!8.84e-19!75;CL:0000192!1.21e-18!42;CL:0000514!1.21e-18!42;CL:0000359!1.50e-17!32;CL:0002620!5.65e-13!23;CL:0000222!7.35e-09!119;CL:0000048!4.07e-08!430;CL:0000723!1.52e-07!436;CL:0000034!7.99e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:1000306;7.06e-09;4!CL:0002547;7.06e-09;4!CL:0002588;4.31e-08;2!CL:0002559;3.10e-07;5!CL:0002595;3.53e-07;5!CL:0000359;7.25e-07;32!CL:0002620;8.79e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,9.84e-09,4;CL:0002547,9.84e-09,4;CL:0000187,2.94e-08,55;CL:0000057,2.95e-08,76;CL:0000192,7.42e-08,43;CL:0000514,7.42e-08,43;CL:0002588,9.21e-08,2;CL:0000680,1.08e-07,58;CL:0000056,1.08e-07,58;CL:0000355,1.08e-07,58;CL:0000359,1.70e-07,32;CL:0002559,2.41e-07,5;CL:0002595,3.33e-07,5;CL:0000393,3.50e-07,61;CL:0000211,3.50e-07,61;CL:0002620,8.34e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.31e-22!70;UBERON:0000914!7.15e-21!83;UBERON:0002329!7.15e-21!83;UBERON:0003077!7.15e-21!83;UBERON:0003059!7.15e-21!83;UBERON:0007282!7.15e-21!83;UBERON:0009618!7.15e-21!83;UBERON:0007285!7.15e-21!83;UBERON:0001134!2.30e-20!61;UBERON:0002036!2.30e-20!61;UBERON:0003082!2.30e-20!61;UBERON:0000486!1.03e-19!82;UBERON:0002385!3.33e-19!63;UBERON:0001015!3.33e-19!63;UBERON:0000383!3.33e-19!63;UBERON:0001637!2.14e-11!42;UBERON:0003509!2.14e-11!42;UBERON:0004572!2.14e-11!42;UBERON:0005256!3.78e-11!143;UBERON:0004872!5.22e-11!84;UBERON:0002049!2.60e-10!79;UBERON:0007798!2.60e-10!79;UBERON:0004573!9.19e-10!33;UBERON:0004571!9.19e-10!33;UBERON:0002199!1.03e-09!45;UBERON:0002416!1.03e-09!45;UBERON:0004535!2.24e-09!110;UBERON:0001981!5.47e-09!60;UBERON:0007500!5.47e-09!60;UBERON:0004537!5.47e-09!60;UBERON:0006965!5.47e-09!60;UBERON:0000475!6.61e-09!365;UBERON:0001009!9.72e-09!113;UBERON:0002097!2.79e-08!40;UBERON:0002100!4.12e-08!216;UBERON:0003914!4.65e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;7.06e-09;4!UBERON:0000415;7.06e-09;4!UBERON:0007240;7.06e-09;4!UBERON:0005742;7.06e-09;4!UBERON:0005734;7.06e-09;4!UBERON:0004664;7.06e-09;4!UBERON:0004663;7.06e-09;4!UBERON:0002073;3.10e-07;5!UBERON:0003834;3.53e-07;5!UBERON:0001533;3.53e-07;5!UBERON:0004573;7.67e-07;33!UBERON:0004571;7.67e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,9.84e-09,4;UBERON:0007240,9.84e-09,4;UBERON:0005742,9.84e-09,4;UBERON:0005734,9.84e-09,4;UBERON:0004664,9.84e-09,4;UBERON:0004663,9.84e-09,4;UBERON:0002329,5.22e-08,71;UBERON:0003059,5.22e-08,71;UBERON:0007282,5.22e-08,71;UBERON:0004290,5.22e-08,71;UBERON:0009618,5.22e-08,71;UBERON:0003077,7.47e-08,72;UBERON:0007285,7.47e-08,72;UBERON:0007524,1.06e-07,73;UBERON:0004573,2.16e-07,33;UBERON:0004571,2.16e-07,33;UBERON:0002073,2.41e-07,5;UBERON:0005086,2.41e-07,5;UBERON:0002199,2.46e-07,46;UBERON:0002416,2.46e-07,46;UBERON:0003834,3.33e-07,5;UBERON:0001533,3.33e-07,5;UBERON:0001134,5.04e-07,62;UBERON:0002036,5.04e-07,62;UBERON:0003082,5.04e-07,62;UBERON:0002097,5.24e-07,41;UBERON:0007503,5.26e-07,78;UBERON:0001637,9.84e-07,42;UBERON:0003509,9.84e-07,42;UBERON:0004572,9.84e-07,42 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0,1.31064823278103,0,0.247532705920093,0.331397375727916,0.672325146451775,1.80808358407193,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0,0,0,0,1.45990461090791,0.472674085820339,0.221729397462564,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13967460498122,1.32409180813219,2.0078563452417,0,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0.980771418680752,0.151357427644931,0.576175924479999,0.468642863667593,0.624320153660641,0,0,0.822041490506354,0.323745888736263,0.140450806702248,0.61246251376468,0,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.567160915800105,0.89694817844431,1.49490172172997,1.90738711043606,0,0.824420233907511,0.257640540045629,0.558350568994769,1.0126579934476,0.876933046450788,0.757301322732344,1.19664868234989,1.2931684545505,1.42003837006646,0.503760491138201,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,3.71494342425583,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,1.54411029268673,0,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,2.46558257895225,0,0,0,0,0,0,0,0,0,1.17587489739202,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,2.37585561880029,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,1.24900292158013,1.57702415033935,1.40569697991256,0,0,0,0,0,0.521301686808497,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0,0.512556597022804,0,0.482561763430822,0,0.154209693802656,1.24293207719189,1.23190734020714,1.55776328755086,0.464841513839837,0,0,0,0.34444334449382,0.364182336013434,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.57602529119306,0,0,0,0,0,0.386682873168488,0.616194468458578,0.614014698904518,0.413509717453592,1.6113036730241,0.870100163485371,0.596586391912706,0.445160178233687,0,0,0,0,0.929691098594572,5.98143458978216,0.6970372701606,0.616067160352178,0,0.869932992075073,0.9266210955196,1.00187420719394,0.372158369359667,0.316379424718726,0.38126038784765,0,0.855877976067841,0.318203247925937,0,0.359744915166629,1.37268514868027,0.589062011728432,0.404364963146632,0,0.421258456238981,0,0.731140468893853,1.05650146756755,0.682499557039929,0.707027159768564,1.13008116620243,2.2054613741845,1.99031692572366,0.876901770507525,0,1.31178950409327,0.405820753925408,0.30982349809975,0.281695602532241,1.00387946542836,1.27723753317057,0.7133421029625,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,1.91400695839152,0.366390373607449,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.264768380074501,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0,1.27134268827375,0,0,0.653174720218818,0,0,0.851940108927109,0,0,0,0.258565912723101,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0.895528817321244,0.701139929541673,1.10961172300523,0.189403005275089,0.754703705257725,0.889811221596536,0.915360273587694,0.907385542579434,2.48699520932449,0.147855149989634,0.955780602982214,0.449803112163605,0.621051827505038,1.24411862352257,0,0.521745061811734,0.450772826991655,0,1.62748293281865,0.727394636810238,0.751873899297419,0.464033759878494,0,0,2.74716564146234,0,0,0,0.214441591374926,0,0,0.694567422971502,0,0.71635536432595,0,0.657852148736121,0,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0.184105950251841,0,0,0,0,1.25812753484717,0,0,5.52694792264376,0.619678821295011,1.67593475391973,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0.15042065669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| |||
|short_description=p12@PAPPA | |||
}} |
Revision as of 03:00, 23 January 2014
Short description: | p12@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PAPPA_5end |
Coexpression cluster: | C4794_placenta_Smooth_Fibroblast_neuroectodermal_Lens_mesenchymal_chorionic |
Association with transcript: | -140bp_to_NM_002581, uc004bjn.2_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219Q7Z613Q86YM8Q8IWT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 9.84e-09 | 4 |
fibroblast of the aortic adventitia | 9.84e-09 | 4 |
muscle cell | 2.94e-08 | 55 |
fibroblast | 2.95e-08 | 76 |
smooth muscle cell | 7.42e-08 | 43 |
smooth muscle myoblast | 7.42e-08 | 43 |
smooth muscle cell of the umbilical vein | 9.21e-08 | 2 |
muscle precursor cell | 1.08e-07 | 58 |
myoblast | 1.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-07 | 58 |
vascular associated smooth muscle cell | 1.70e-07 | 32 |
hair follicle cell | 2.41e-07 | 5 |
smooth muscle cell of the subclavian artery | 3.33e-07 | 5 |
electrically responsive cell | 3.50e-07 | 61 |
electrically active cell | 3.50e-07 | 61 |
skin fibroblast | 8.34e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
artery wall | 9.84e-09 | 4 |
tunica adventitia of artery | 9.84e-09 | 4 |
adventitia | 9.84e-09 | 4 |
tunica adventitia of blood vessel | 9.84e-09 | 4 |
aorta tunica adventitia | 9.84e-09 | 4 |
aorta wall | 9.84e-09 | 4 |
somite | 5.22e-08 | 71 |
presomitic mesoderm | 5.22e-08 | 71 |
presumptive segmental plate | 5.22e-08 | 71 |
dermomyotome | 5.22e-08 | 71 |
trunk paraxial mesoderm | 5.22e-08 | 71 |
paraxial mesoderm | 7.47e-08 | 72 |
presumptive paraxial mesoderm | 7.47e-08 | 72 |
dense mesenchyme tissue | 1.06e-07 | 73 |
systemic artery | 2.16e-07 | 33 |
systemic arterial system | 2.16e-07 | 33 |
hair follicle | 2.41e-07 | 5 |
hair follicle placode | 2.41e-07 | 5 |
integument | 2.46e-07 | 46 |
integumental system | 2.46e-07 | 46 |
thoracic segment blood vessel | 3.33e-07 | 5 |
subclavian artery | 3.33e-07 | 5 |
skeletal muscle tissue | 5.04e-07 | 62 |
striated muscle tissue | 5.04e-07 | 62 |
myotome | 5.04e-07 | 62 |
skin of body | 5.24e-07 | 41 |
epithelial vesicle | 5.26e-07 | 78 |
artery | 9.84e-07 | 42 |
arterial blood vessel | 9.84e-07 | 42 |
arterial system | 9.84e-07 | 42 |