FFCP PHASE1:Hg19::chr9:118358874..118358932,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4793 | |||
|description=CAGE_peak_at_chr9:118358874..118358932,+ | |||
|id=chr9:118358874..118358932,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.77e-46!180;CL:0000057!1.31e-27!75;CL:0000680!2.75e-22!57;CL:0000056!2.75e-22!57;CL:0000355!2.75e-22!57;CL:0000187!1.51e-20!54;CL:0000183!8.03e-20!59;CL:0000393!1.44e-17!60;CL:0000211!1.44e-17!60;CL:0002620!9.22e-16!23;CL:0000192!1.21e-14!42;CL:0000514!1.21e-14!42;CL:0000359!1.90e-14!32;CL:0000048!2.49e-13!430;CL:0000723!1.89e-12!436;CL:0000034!2.45e-11!444;CL:0000144!6.16e-11!625;CL:0002371!4.28e-10!591;CL:0000188!2.74e-08!9;CL:0002570!7.90e-08!8;CL:0000222!2.25e-07!119;CL:0000548!2.63e-07!679;CL:0000004!2.63e-07!679;CL:0000255!2.63e-07!679;CL:0000012!5.39e-07!682;CL:0002494!7.10e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.17e-21;23!CL:0000057;6.55e-13;73!CL:0000359;6.13e-11;32!CL:0000188;1.41e-10;9!CL:0002570;7.04e-10;8!CL:0000187;1.81e-09;55!CL:0000680;2.38e-08;7!CL:0000393;2.41e-07;61!CL:0000211;2.41e-07;61!CL:0000192;2.47e-07;43!CL:0002320;7.95e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.50e-30,76;CL:0002620,9.44e-21,23;CL:0000680,1.46e-17,58;CL:0000056,1.46e-17,58;CL:0000355,1.46e-17,58;CL:0000187,1.44e-15,55;CL:0000048,7.46e-15,427;CL:0000723,3.91e-14,433;CL:0000034,3.26e-13,441;CL:0000393,5.98e-13,61;CL:0000211,5.98e-13,61;CL:0000359,1.14e-11,32;CL:0000188,1.53e-10,9;CL:0000192,3.31e-10,43;CL:0000514,3.31e-10,43;CL:0002570,6.27e-10,8 | |||
|ontology_enrichment_development_v019=CL:0000355;1.78e-09;58!CL:0000514;2.47e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.17e-29!83;UBERON:0002329!6.17e-29!83;UBERON:0003077!6.17e-29!83;UBERON:0003059!6.17e-29!83;UBERON:0007282!6.17e-29!83;UBERON:0009618!6.17e-29!83;UBERON:0007285!6.17e-29!83;UBERON:0004290!2.47e-25!70;UBERON:0001134!2.60e-20!61;UBERON:0002036!2.60e-20!61;UBERON:0003082!2.60e-20!61;UBERON:0000486!4.05e-20!82;UBERON:0002385!4.62e-19!63;UBERON:0001015!4.62e-19!63;UBERON:0000383!4.62e-19!63;UBERON:0005256!2.05e-14!143;UBERON:0002199!1.56e-13!45;UBERON:0002416!1.56e-13!45;UBERON:0002097!2.36e-12!40;UBERON:0000475!5.86e-11!365;UBERON:0003102!2.97e-10!95;UBERON:0002100!6.01e-10!216;UBERON:0001637!1.70e-09!42;UBERON:0003509!1.70e-09!42;UBERON:0004572!1.70e-09!42;UBERON:0004573!1.62e-08!33;UBERON:0004571!1.62e-08!33;UBERON:0000490!3.38e-07!138;UBERON:0004872!7.17e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.37e-12;31!UBERON:0001015;2.37e-12;31!UBERON:0000383;2.37e-12;31!UBERON:0002097;9.38e-11;41!UBERON:0002199;6.33e-10;46!UBERON:0002416;6.33e-10;46!UBERON:0001134;8.58e-09;16!UBERON:0002036;8.58e-09;16!UBERON:0002204;1.75e-08;70!UBERON:0003102;6.02e-08;50!UBERON:0004573;7.72e-08;33!UBERON:0004571;7.72e-08;33!UBERON:0002384;2.63e-07;198!UBERON:0002067;6.04e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.44e-20,71;UBERON:0003059,1.44e-20,71;UBERON:0007282,1.44e-20,71;UBERON:0004290,1.44e-20,71;UBERON:0009618,1.44e-20,71;UBERON:0003077,4.51e-20,72;UBERON:0007285,4.51e-20,72;UBERON:0007524,1.37e-19,73;UBERON:0007503,2.21e-17,78;UBERON:0000486,4.20e-17,83;UBERON:0001134,1.24e-15,62;UBERON:0002036,1.24e-15,62;UBERON:0003082,1.24e-15,62;UBERON:0002199,1.88e-15,46;UBERON:0002416,1.88e-15,46;UBERON:0002385,9.07e-15,64;UBERON:0001015,9.07e-15,64;UBERON:0000383,9.07e-15,64;UBERON:0002097,1.31e-14,41;UBERON:0005256,3.82e-09,122;UBERON:0001637,4.84e-09,42;UBERON:0003509,4.84e-09,42;UBERON:0004572,4.84e-09,42;UBERON:0003102,6.51e-09,99;UBERON:0004573,5.49e-08,33;UBERON:0004571,5.49e-08,33;UBERON:0002384,1.83e-07,371;UBERON:0003104,3.58e-07,160;UBERON:0009142,3.58e-07,160;UBERON:0000490,5.09e-07,148;UBERON:0002067,6.59e-07,9;UBERON:0004016,6.59e-07,9;UBERON:0010083,6.59e-07,9 | |||
|phase1_expression=6.7221000330106,5.56661362116556,2.25527046553554,0,0.446961094427288,0.872338524100369,0,2.52687949370732,0.522371256399677,0,0,0,0,1.11389717664042,1.98838425436749,8.0679017574213,6.62963980826375,8.76372108464848,10.7345215733912,0.369363174230364,0,0.313454721478088,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,1.00267582127178,0.579386075843295,0,0,5.19941494402373,4.87804674417641,2.89854792787316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,1.2663051166458,19.8613771219828,3.15520282823695,0.354668382198357,0.560677600142307,2.1349799145941,2.22000793575444,2.48968828319813,3.77189881795127,1.79808093424805,2.72443369760877,1.72852777344,0.468642863667593,10.6134426122309,2.2818872861778,3.58676833324323,4.11020745253177,4.04682360920329,2.94946694074722,2.04154171254893,0.982674538494144,2.47981874821837,8.31602000097437,4.45080472701402,0,0,1.0100166837244,1.00094815897571,2.49357703935765,4.82875382968922,7.96868269077451,5.55880817954408,2.38207584636044,12.5572744982203,15.5896893837554,2.96704661623387,3.00091096084402,6.90451945897541,10.8209026819164,8.18914167858995,7.76371128309825,2.43592512902997,12.8741224864498,9.38908966151453,2.10139873864455,15.9754316632476,5.44061330429257,3.22165125389926,0,0,0,0,0,0,0,0,0,7.8224766164908,0.643240938192885,1.38134921352481,24.1471322576629,21.6563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,3.08822058537346,0,0,0,0,0.325808305310325,0,1.44331342025273,1.04337364477569,0.821860859650752,0.433099343283221,0,0,0,0,0,0,0,0,1.00789276919316,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0,0,3.25180144601546,0.87192013766656,3.59357600522655,2.58543431515556,3.57656445851882,6.762422020448,0.797814349754612,0,0.771622122786426,0,0,0.428933980974443,0,0,10.7492940816933,0,0,0,0,0,0,0,0,3.83399768786532,0,4.27910715122155,3.32997005335432,2.05476322550383,6.26713371339634,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.69921281782108,4.50153468953709,2.44138521329762,4.57535895367776,5.88815663030634,6.78120384645919,4.56851518471581,3.61135319673263,2.27407504055985,1.03473071292505,1.99267679560631,1.10621501125022,15.2046325319145,0.391602314925481,0.686286847621712,0,0,0,0,0,0,5.21026396419431,10.4354141835882,3.92924132206303,4.86928767171664,0.511707249066704,0,0,3.85524234506639,3.19611105563629,6.07740954502188,2.59627214591811,3.48631135379878,0,0.200506470303285,0,0,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,0.650060246036521,4.82051789532479,5.89691381581944,4.1593126620954,3.68408819342711,7.58101148664918,31.796392481009,12.3264189827094,5.11359764496605,4.62966585363034,0,0,0,0,0.929691098594572,6.61105928344344,0.6970372701606,1.84820148105653,0,3.47973196830029,2.40921484835096,1.86062352764589,5.95453390975468,2.84741482246853,0.762520775695299,0,0,8.27328444607436,3.13979456079692,2.87795932133304,1.92175920815238,1.17812402345686,0.808729926293264,1.58510321173008,2.10629228119491,0,3.1682753652067,0,0.9554993798559,0,1.13008116620243,2.75682671773062,1.99031692572366,2.19225442626881,1.15755106853338,0.655894752046633,5.0727594240676,1.54911749049875,0.563391205064483,0.573645408816206,0.392996164052485,4.280052617775,0.354761064070598,0,1.97576935775941,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,7.46495010388338,0.179736702294654,0,0,0.0986434056369336,0,4.44547960578548,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,7.74805979759608,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,4.12726645207958,0,0,0,0.063186579628488,0,0,1.32930774541437,3.97190347050599,1.56966459203613,2.38944859545918,0.284609546029793,0.693373365065693,0,0,0,0,1.89184635718778,0,0,0,0,0,0,3.70013196546227,0.993573058514948,0,0,3.12619398980981,0,0.19980960958213,0,0,0,0,0.248505071130865,0,1.49494626680975,1.35983700206033,4.38592335836184,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.25426853765475,0,3.45688596480507,0.979762080328227,7.18381149374925,0,12.0975495467649,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,3.52898729547258,0,0,5.82093731258809,10.7508122529723,7.21247619953397,5.68209015825267,4.27665432979378,10.6777346591584,11.89968355664,0.756154618816195,1.24349760466224,6.20991629956462,1.91156120596443,5.39763734596325,2.94999618064893,1.65882483136342,2.39257543102195,3.1304703708704,0.150257608997218,0,2.84809513243263,2.72772988803839,0.537052785212442,3.71227007902795,2.3885753321917,0.800055529326307,9.27168403993541,4.71449284272287,12.6184898228651,0,0,1.04397716786085,0.906823702049089,2.08370226891451,0.244736704506468,6.08902059677057,0,0,0,0,0,0,0.345430341731199,1.51929978088691,0,0,0,0,5.89697727923543,0.491545817507439,0,0,0,0,0,4.41854280604418,0,0,0,0,7.70603115093892,0,4.58277830875868,12.5419202859993,11.8978333688642,7.26238393365217,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4324388592045,13.1168385951419,0,0,1.21023041222112,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,1.71488009437418,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0.347716544605159,0.801711364730253,0,0.51215543128185,0,0,3.90495602410866,3.74938980940294,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,2.71883383500507,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,4.83593523616777,0.924351257262837,3.46101249699031,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,1.17400080465487,3.8614456457388,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr9:118358874..118358932,+ | |||
}} |
Revision as of 02:59, 23 January 2014
Short description: | p@chr9:118358874..118358932, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118358874..118358932, + |
Coexpression cluster: | C4793_Fibroblast_Hair_Skeletal_mesodermal_Preadipocyte_neuroectodermal_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.50e-30 | 76 |
skin fibroblast | 9.44e-21 | 23 |
muscle precursor cell | 1.46e-17 | 58 |
myoblast | 1.46e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-17 | 58 |
muscle cell | 1.44e-15 | 55 |
multi fate stem cell | 7.46e-15 | 427 |
somatic stem cell | 3.91e-14 | 433 |
stem cell | 3.26e-13 | 441 |
electrically responsive cell | 5.98e-13 | 61 |
electrically active cell | 5.98e-13 | 61 |
vascular associated smooth muscle cell | 1.14e-11 | 32 |
cell of skeletal muscle | 1.53e-10 | 9 |
smooth muscle cell | 3.31e-10 | 43 |
smooth muscle myoblast | 3.31e-10 | 43 |
mesenchymal stem cell of adipose | 6.27e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
somite | 1.44e-20 | 71 |
presomitic mesoderm | 1.44e-20 | 71 |
presumptive segmental plate | 1.44e-20 | 71 |
dermomyotome | 1.44e-20 | 71 |
trunk paraxial mesoderm | 1.44e-20 | 71 |
paraxial mesoderm | 4.51e-20 | 72 |
presumptive paraxial mesoderm | 4.51e-20 | 72 |
dense mesenchyme tissue | 1.37e-19 | 73 |
epithelial vesicle | 2.21e-17 | 78 |
multilaminar epithelium | 4.20e-17 | 83 |
skeletal muscle tissue | 1.24e-15 | 62 |
striated muscle tissue | 1.24e-15 | 62 |
myotome | 1.24e-15 | 62 |
integument | 1.88e-15 | 46 |
integumental system | 1.88e-15 | 46 |
muscle tissue | 9.07e-15 | 64 |
musculature | 9.07e-15 | 64 |
musculature of body | 9.07e-15 | 64 |
skin of body | 1.31e-14 | 41 |
trunk mesenchyme | 3.82e-09 | 122 |
artery | 4.84e-09 | 42 |
arterial blood vessel | 4.84e-09 | 42 |
arterial system | 4.84e-09 | 42 |
surface structure | 6.51e-09 | 99 |
systemic artery | 5.49e-08 | 33 |
systemic arterial system | 5.49e-08 | 33 |
connective tissue | 1.83e-07 | 371 |
mesenchyme | 3.58e-07 | 160 |
entire embryonic mesenchyme | 3.58e-07 | 160 |
unilaminar epithelium | 5.09e-07 | 148 |
dermis | 6.59e-07 | 9 |
dermatome | 6.59e-07 | 9 |
future dermis | 6.59e-07 | 9 |