FFCP PHASE1:Hg19::chr9:117798509..117798537,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5318 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-334bp_to_ENST00000460345_5end | |||
|description=CAGE_peak_6_at_TNC_5end | |||
|id=chr9:117798509..117798537,- | |||
|ontology_enrichment_celltype=CL:0002368!3.84e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000135;6.55e-13;3!CL:0000388;6.55e-13;3!CL:1001319;2.62e-10;1!CL:1000600;2.62e-10;1!CL:0002327;6.53e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.15e-13,3;CL:0000388,5.15e-13,3;CL:1001319,2.08e-10,1;CL:1000600,2.08e-10,1;CL:0002327,6.84e-10,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.22e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.48e-23;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.58e-23,14 | |||
|ontology_enrichment_uberon=UBERON:0001708!1.40e-07!4;UBERON:0001704!1.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.55e-13;3!UBERON:0000043;6.55e-13;3!UBERON:0007845;6.55e-13;3!UBERON:0000997;1.24e-10;1!UBERON:0005056;1.24e-10;1!UBERON:0004176;1.24e-10;1!UBERON:0004645;2.62e-10;1!UBERON:0001256;2.62e-10;1!UBERON:0001259;2.62e-10;1!UBERON:0003343;3.70e-10;4!UBERON:0004785;3.70e-10;4!UBERON:0001911;6.53e-10;4!UBERON:0002331;5.83e-09;10!UBERON:0000974;4.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.15e-13,3;UBERON:0000043,5.15e-13,3;UBERON:0007845,5.15e-13,3;UBERON:0000997,1.30e-10,1;UBERON:0005056,1.30e-10,1;UBERON:0000076,1.50e-10,8;UBERON:0004645,2.08e-10,1;UBERON:0001256,2.08e-10,1;UBERON:0001259,2.08e-10,1;UBERON:0003343,3.97e-10,4;UBERON:0004785,3.97e-10,4;UBERON:0001911,6.84e-10,4;UBERON:0005333,6.84e-10,4;UBERON:0008425,6.84e-10,4;UBERON:0005311,6.84e-10,4;UBERON:0002331,5.83e-09,10;UBERON:0000358,5.83e-09,10;UBERON:0000307,5.83e-09,10;UBERON:0000091,5.83e-09,10;UBERON:0000087,5.83e-09,10;UBERON:0007010,5.83e-09,10;UBERON:0007806,5.83e-09,10;UBERON:0008780,5.83e-09,10;UBERON:0005728,5.83e-09,10 | |||
|phase1_expression=0,1.92690471501885,0.140954404095971,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.687720651731561,1.47781061009902,1.33808328233255,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0.973269740605272,0.567208902984407,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0,0,0.339121184620975,0.966304265816484,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,0.567100388969546,1.25381931783988,1.74380363108377,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0,0.117141414992713,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0.462629081407967,0.710246901252508,0,0,0,0,1.20303882181971,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.178064071293475,1.32227932288782,0.768760269460425,0.255225424989168,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0.288666338176536,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0.593929361665277,0,0,0,0.556543525114529,0.659215496907038,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74433805888995,3.33622635155558,2.19286093961456,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,2.05784034570193,4.87531556850254,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,8.93677760878255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0,0.50313580350515,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0.363697318405119,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0.344429959321631,0,0.184105950251841,0.279759015438889,1.86623178009892,0.127894371303652,0,0,0,0,0.850299680406731,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,1.37406805901436,0,0.366857197043358,5.4297063090659,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.0999411559249289,0.71421575442263,8.82237179289229,0,0,0,0,0,0,0,0.5290268405154,1.85997509083376,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.33639558774184,0,0,0,0,0,0.215166616178029,0,1.62806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TNC | |||
}} |
Revision as of 02:59, 23 January 2014
Short description: | p6@TNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNC_5end |
Coexpression cluster: | NA |
Association with transcript: | -334bp_to_ENST00000460345_5end |
EntrezGene: | TNC |
HGNC: | 5318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.15e-13 | 3 |
tendon cell | 5.15e-13 | 3 |
bladder cell | 2.08e-10 | 1 |
lower urinary tract cell | 2.08e-10 | 1 |
mammary gland epithelial cell | 6.84e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.15e-13 | 3 |
tendon | 5.15e-13 | 3 |
regular connective tissue | 5.15e-13 | 3 |
mammalian vulva | 1.30e-10 | 1 |
external female genitalia | 1.30e-10 | 1 |
external ectoderm | 1.50e-10 | 8 |
urinary bladder urothelium | 2.08e-10 | 1 |
wall of urinary bladder | 2.08e-10 | 1 |
mucosa of urinary bladder | 2.08e-10 | 1 |
mucosa of oral region | 3.97e-10 | 4 |
respiratory system mucosa | 3.97e-10 | 4 |
mammary gland | 6.84e-10 | 4 |
mammary bud | 6.84e-10 | 4 |
mammary ridge | 6.84e-10 | 4 |
mammary placode | 6.84e-10 | 4 |
umbilical cord | 5.83e-09 | 10 |
blastocyst | 5.83e-09 | 10 |
blastula | 5.83e-09 | 10 |
bilaminar disc | 5.83e-09 | 10 |
inner cell mass | 5.83e-09 | 10 |
cleaving embryo | 5.83e-09 | 10 |
connecting stalk | 5.83e-09 | 10 |
inner cell mass derived epiblast | 5.83e-09 | 10 |
extraembryonic mesoderm | 5.83e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.58e-23 | 14 |