FFCP PHASE1:Hg19::chr9:117647523..117647530,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C264 | |||
|description=CAGE_peak_at_chr9:117647523..117647530,+ | |||
|id=chr9:117647523..117647530,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.18e-23!254;CL:0000223!3.23e-19!59;CL:0002178!2.92e-10!3;CL:0002076!4.61e-10!43;CL:0000181!4.76e-09!12;CL:0000417!4.76e-09!12;CL:0000668!4.76e-09!12;CL:0000414!4.76e-09!12;CL:0000412!4.76e-09!12;CL:0000182!4.76e-09!12;CL:0002327!2.60e-08!4;CL:0002251!7.22e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.07e-12;3!CL:0000083;1.50e-09;4!CL:0000312;6.78e-08;5!CL:0000240;8.72e-07;6!CL:0000311;8.72e-07;6!CL:0000079;8.72e-07;6!CL:0000237;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.07e-12,3;CL:0000083,1.32e-09,4;CL:0000312,7.49e-08,5;CL:0000240,9.49e-07,6;CL:0000311,9.49e-07,6;CL:0000079,9.49e-07,6;CL:0000237,9.49e-07,6;CL:0000036,9.49e-07,6;CL:0000357,9.49e-07,6;CL:0000114,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;8.72e-07;6!CL:0000114;8.72e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.25e-35!106;DOID:0050687!2.90e-25!143;DOID:162!2.47e-16!235;DOID:14566!8.93e-16!239;DOID:299!3.34e-14!25;DOID:7!3.18e-13!39;DOID:4929!2.26e-08!2;DOID:3493!5.00e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;5.53e-66;2!DOID:3910;6.48e-18;2!DOID:4468;9.86e-18;2!DOID:299;1.36e-12;25!DOID:1793;1.50e-09;4!DOID:3908;5.73e-08;5!DOID:170;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.84e-66,2;DOID:3910,6.48e-18,2;DOID:4468,1.07e-17,2;DOID:299,1.28e-12,25;DOID:1793,1.32e-09,4;DOID:305,3.00e-08,106;DOID:3908,5.73e-08,5;DOID:170,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.82e-17!129;UBERON:0004185!1.82e-17!129;UBERON:0001007!1.32e-15!155;UBERON:0001555!1.32e-15!155;UBERON:0007026!1.32e-15!155;UBERON:0005911!3.57e-15!82;UBERON:0000077!8.30e-15!130;UBERON:0004119!9.61e-15!169;UBERON:0000925!9.61e-15!169;UBERON:0006595!9.61e-15!169;UBERON:0001041!1.75e-14!98;UBERON:0005153!3.61e-12!37;UBERON:0007499!3.01e-11!25;UBERON:0009856!9.78e-11!26;UBERON:0008835!2.12e-10!22;UBERON:0003894!2.12e-10!22;UBERON:0003929!5.79e-10!54;UBERON:0009854!7.13e-10!23;UBERON:0009497!5.98e-09!25;UBERON:0000015!5.98e-09!25;UBERON:0002423!5.98e-09!25;UBERON:0006235!5.98e-09!25;UBERON:0004161!5.98e-09!25;UBERON:0002365!1.68e-08!31;UBERON:0002330!1.68e-08!31;UBERON:0001911!2.60e-08!4;UBERON:0005333!2.60e-08!4;UBERON:0008425!2.60e-08!4;UBERON:0005311!2.60e-08!4;UBERON:0001048!2.64e-08!168;UBERON:0008947!3.10e-08!38;UBERON:0003258!3.10e-08!38;UBERON:0002394!3.24e-08!4;UBERON:0003928!3.24e-08!4;UBERON:0005157!4.94e-08!51;UBERON:0000466!6.60e-08!126;UBERON:0002530!1.92e-07!59;UBERON:0003104!2.85e-07!238;UBERON:0009142!2.85e-07!238;UBERON:0002107!2.94e-07!19;UBERON:0006925!2.94e-07!19;UBERON:0008836!2.94e-07!19;UBERON:0005177!3.52e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.97e-34;1!UBERON:0003703;5.97e-34;1!UBERON:0001174;5.97e-34;1!UBERON:0004914;5.97e-34;1!UBERON:0004903;6.48e-18;2!UBERON:0002173;6.48e-18;2!UBERON:0002186;6.48e-18;2!UBERON:0000058;3.14e-14;10!UBERON:0004821;2.07e-12;3!UBERON:0007499;2.07e-12;3!UBERON:0003215;2.07e-12;3!UBERON:0010368;2.07e-12;3!UBERON:0009911;2.07e-12;3!UBERON:0002299;2.07e-12;3!UBERON:0006524;2.07e-12;3!UBERON:0008874;2.07e-12;3!UBERON:0002169;2.07e-12;3!UBERON:0004894;2.07e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0009856;1.22e-09;4!UBERON:0002394;1.50e-09;4!UBERON:0003928;1.50e-09;4!UBERON:0002108;6.78e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.05e-34,1;UBERON:0003703,5.05e-34,1;UBERON:0001174,5.05e-34,1;UBERON:0004914,5.05e-34,1;UBERON:0004903,6.48e-18,2;UBERON:0002173,6.48e-18,2;UBERON:0002186,6.48e-18,2;UBERON:0004821,2.07e-12,3;UBERON:0003215,2.07e-12,3;UBERON:0010368,2.07e-12,3;UBERON:0009911,2.07e-12,3;UBERON:0002299,2.07e-12,3;UBERON:0006524,2.07e-12,3;UBERON:0008874,2.07e-12,3;UBERON:0002169,2.07e-12,3;UBERON:0004894,2.07e-12,3;UBERON:0002114,2.59e-12,2;UBERON:0000058,5.73e-08,19;UBERON:0002108,6.55e-08,4;UBERON:0002394,8.48e-07,6;UBERON:0003928,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.716468181622786,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0.796554137998498,2.79679015322043,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0.397429223405979,0,0,0,0,0.19980960958213,0.144090417154106,0,0,12.9649318189335,0,0.235694034616795,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.412079291905832,0.26961417541674,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0,0,0.49131575253029,1.18284868973636,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.588901401691458,0.487671699929078,0,0,0,0,0,0,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,1.88632924423832,0,0,0,0,0,0 | |||
|short_description=p@chr9:117647523..117647530,+ | |||
}} |
Revision as of 02:57, 23 January 2014
Short description: | p@chr9:117647523..117647530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:117647523..117647530, + |
Coexpression cluster: | C264_giant_keratoacanthoma_colon_fibrosarcoma_HES3GFP_Hep2_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.07e-12 | 3 |
epithelial cell of pancreas | 1.32e-09 | 4 |
keratinocyte | 7.49e-08 | 5 |
stratified squamous epithelial cell | 9.49e-07 | 6 |
keratin accumulating cell | 9.49e-07 | 6 |
stratified epithelial cell | 9.49e-07 | 6 |
keratinizing barrier epithelial cell | 9.49e-07 | 6 |
epithelial fate stem cell | 9.49e-07 | 6 |
stratified epithelial stem cell | 9.49e-07 | 6 |
surface ectodermal cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.05e-34 | 1 |
extrahepatic bile duct | 5.05e-34 | 1 |
common bile duct | 5.05e-34 | 1 |
duodenal papilla | 5.05e-34 | 1 |
bronchoalveolar duct junction | 6.48e-18 | 2 |
alveolar duct | 6.48e-18 | 2 |
bronchiole | 6.48e-18 | 2 |
pulmonary alveolus epithelium | 2.07e-12 | 3 |
alveolus | 2.07e-12 | 3 |
pulmonary lobule | 2.07e-12 | 3 |
lobule | 2.07e-12 | 3 |
alveolus of lung | 2.07e-12 | 3 |
alveolar system | 2.07e-12 | 3 |
pulmonary acinus | 2.07e-12 | 3 |
alveolar sac | 2.07e-12 | 3 |
alveolar wall | 2.07e-12 | 3 |
duodenum | 2.59e-12 | 2 |
duct | 5.73e-08 | 19 |
small intestine | 6.55e-08 | 4 |
bile duct | 8.48e-07 | 6 |
digestive system duct | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.84e-66 | 2 |
lung adenocarcinoma | 6.48e-18 | 2 |
clear cell adenocarcinoma | 1.07e-17 | 2 |
adenocarcinoma | 1.28e-12 | 25 |
pancreatic cancer | 1.32e-09 | 4 |
carcinoma | 3.00e-08 | 106 |
non-small cell lung carcinoma | 5.73e-08 | 5 |
endocrine gland cancer | 8.02e-07 | 6 |