FFCP PHASE1:Hg19::chr9:112542441..112542534,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445815,114299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33529,15845 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D5,Q8IXS6 | |||
|association_with_transcript=-42bp_to_NM_007203,NM_053016,NM_147150,uc004beh.3,uc004bei.2,uc004bej.3,uc004bek.3_5end | |||
|coexpression_cluster_id=C4788 | |||
|description=CAGE_peak_1_at_PALM2_5end,CAGE_peak_3_at_PALM2-AKAP2_5end | |||
|id=chr9:112542441..112542534,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.29e-26!180;CL:0000057!5.38e-12!75;CL:0000136!1.00e-10!15;CL:0000680!7.73e-09!57;CL:0000056!7.73e-09!57;CL:0000355!7.73e-09!57;CL:0000187!5.09e-08!54;CL:0000183!2.06e-07!59;CL:0000393!2.48e-07!60;CL:0000211!2.48e-07!60;CL:0000325!3.27e-07!39;CL:0002334!9.97e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.35e-11;13!CL:0002334;2.50e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.87e-13,76;CL:0000136,1.01e-11,15;CL:0000680,1.24e-07,58;CL:0000056,1.24e-07,58;CL:0000355,1.24e-07,58;CL:0002334,2.71e-07,12;CL:0000187,8.37e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.14e-17!365;UBERON:0000486!6.47e-13!82;UBERON:0004290!1.65e-12!70;UBERON:0000914!2.60e-12!83;UBERON:0002329!2.60e-12!83;UBERON:0003077!2.60e-12!83;UBERON:0003059!2.60e-12!83;UBERON:0007282!2.60e-12!83;UBERON:0009618!2.60e-12!83;UBERON:0007285!2.60e-12!83;UBERON:0005256!1.81e-11!143;UBERON:0002100!4.40e-11!216;UBERON:0000481!2.19e-10!347;UBERON:0001134!4.08e-10!61;UBERON:0002036!4.08e-10!61;UBERON:0003082!4.08e-10!61;UBERON:0002385!5.94e-10!63;UBERON:0001015!5.94e-10!63;UBERON:0000383!5.94e-10!63;UBERON:0002199!1.42e-09!45;UBERON:0002416!1.42e-09!45;UBERON:0000468!3.33e-09!659;UBERON:0000119!3.47e-09!312;UBERON:0000483!1.06e-08!309;UBERON:0007100!1.69e-08!27;UBERON:0003102!3.52e-08!95;UBERON:0001013!9.33e-08!14;UBERON:0002097!2.22e-07!40;UBERON:0000948!3.10e-07!24;UBERON:0005498!3.10e-07!24;UBERON:0004140!3.10e-07!24;UBERON:0009881!3.10e-07!24;UBERON:0004141!3.10e-07!24;UBERON:0003084!3.10e-07!24;UBERON:0007005!3.10e-07!24;UBERON:0004139!3.10e-07!24;UBERON:0004291!3.10e-07!24;UBERON:0003104!7.51e-07!238;UBERON:0009142!7.51e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.53e-09;31!UBERON:0001015;2.53e-09;31!UBERON:0000383;2.53e-09;31!UBERON:0007100;4.43e-09;25!UBERON:0001013;1.75e-08;14!UBERON:0000948;1.04e-07;22!UBERON:0001134;1.17e-07;16!UBERON:0002036;1.17e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.98e-11,71;UBERON:0003059,1.98e-11,71;UBERON:0007282,1.98e-11,71;UBERON:0004290,1.98e-11,71;UBERON:0009618,1.98e-11,71;UBERON:0000486,2.66e-11,83;UBERON:0007524,3.98e-11,73;UBERON:0003077,5.48e-11,72;UBERON:0007285,5.48e-11,72;UBERON:0005256,7.42e-11,122;UBERON:0002199,7.25e-10,46;UBERON:0002416,7.25e-10,46;UBERON:0007503,1.23e-09,78;UBERON:0007100,2.06e-09,27;UBERON:0001134,6.25e-09,62;UBERON:0002036,6.25e-09,62;UBERON:0003082,6.25e-09,62;UBERON:0002385,1.48e-08,64;UBERON:0001015,1.48e-08,64;UBERON:0000383,1.48e-08,64;UBERON:0001013,1.97e-08,14;UBERON:0002100,4.83e-08,199;UBERON:0000948,5.25e-08,24;UBERON:0005498,5.25e-08,24;UBERON:0004140,5.25e-08,24;UBERON:0009881,5.25e-08,24;UBERON:0004141,5.25e-08,24;UBERON:0003084,5.25e-08,24;UBERON:0007005,5.25e-08,24;UBERON:0004139,5.25e-08,24;UBERON:0004291,5.25e-08,24;UBERON:0003104,1.35e-07,160;UBERON:0009142,1.35e-07,160;UBERON:0002097,1.66e-07,41;UBERON:0003102,5.46e-07,99;UBERON:0004458,6.34e-07,49 | |||
|phase1_expression=29.2502190625596,34.8983853942303,30.3051968806338,38.0278533741896,62.5745532198203,23.55314015071,25.3299878168311,17.6881564559513,13.0592814099919,2.7030733015166,1.39560233594486,0.218441372130172,1.58260186937072,0.123766352960047,0,6.72325146451775,3.01347264011988,4.38186054232424,3.41552959153355,3.32426856807327,2.04000691244253,1.56727360739044,0.572471974262113,2.18999080116615,1.50651167513763,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,2.9408389224012,1.80719576192283,6.51739283826656,1.30361867064741,19.0868627292264,8.27279279514481,2.74150969775797,3.54767035940102,4.30390449896318,2.94702919869853,1.09288586487763,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,5.4666914686485,1.8994576749687,5.56118559415519,0.860509862246441,2.83734705758686,4.48542080113846,7.47242970107935,3.20667812942308,2.8008993185979,1.75123873690594,2.45192854670188,2.11900398702904,4.03323147135999,0.468642863667593,2.18512053781224,2.2818872861778,3.58676833324323,5.63685593490071,6.63679071909339,4.21352420106745,2.24569588380383,1.96534907698829,1.34323515528495,7.12801714369232,4.69807165629258,1.82032272387605,2.87447256726495,1.5150250255866,2.75260743718321,1.6623846929051,2.63386572528503,3.67785354958824,10.065949946742,1.24775401476023,3.7671823494661,4.69826255400848,6.56988893594642,2.10063767259082,3.09157587715317,8.24449728146013,6.51408997160564,3.71307930930786,4.96928726322113,4.03894038790583,4.87864462804187,3.23292113637624,3.90510551768276,2.11579406278045,3.73033303083073,1.73934767846967,3.27295344709002,1.14721838155602,2.31750041646231,1.59035721985782,0.580969714347592,1.45125477021519,0.756962552626885,2.18986415445498,14.0804579096834,7.71889125831462,5.52539685409922,3.25057549622385,0.721879481669586,0.236613600079688,0.674338760312407,0.482022059766964,0.441175890929576,0.217879444092406,0.474541238222193,0.134831308160164,0,0.769494313892781,0,4.20725321410337,2.4694440679884,4.41026134156626,19.0132552232746,30.4676437170064,21.2684366405305,0,0,2.91665277507493,1.20725313949488,1.1240175325762,0.201057944823262,0.648119116109707,0.977424915930974,0,4.3299402607582,1.507095264676,4.46153038096122,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,1.41775097242386,4.38836761243957,1.45316969256981,3.06706143332169,0,0,0.414656231081544,0.144119953416961,0.12624243342638,3.80987365753014,4.58386110669933,4.68869788840188,1.71072446022705,3.496134751913,2.70308752059526,1.14330573052231,5.15802987988659,5.66748089483264,2.2001485746285,5.30014034606889,7.15312891703765,6.762422020448,14.0947201789981,3.12022310734098,1.28603687131071,0,1.3321108950805,1.14382394926518,0,1.64648067356154,7.49193223875591,0,0,3.31583314765545,1.74306691720059,2.19940580600526,0,0,0,5.99062138728957,3.44585807502342,15.690059554479,3.4747513600219,5.13690806375959,7.69962141931551,0,0,0,0,2.03275699377971,1.30139853857622,1.54657762555539,1.17261385734044,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,5.61521326133179,1.78428988797162,1.73472656537328,3.04567678981054,3.00946099727719,0,1.03473071292505,4.64957918974806,6.63729006750131,3.47534457872331,0.587403472388222,5.49029478097369,0,0,0,0,1.66435439510497,0.604780586659361,16.3751153160393,31.6131664973409,15.436305193819,12.0450800300359,18.4214609664013,10.4555048743345,7.42090332224955,6.63101683351419,8.34540108971697,4.10635780069046,2.59627214591811,4.53220475993841,0,2.00506470303285,1.38121483403844,1.03333003348146,0.910455840033585,0.393373244878272,0,0.770153371044148,2.35304930753057,0,3.37765212457202,0,0,1.29549549661284,0,0.541892875087706,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0,0.512900250232778,0.656029291399411,0,13.1892494909085,10.1642105948361,8.99353549134409,3.44559322797703,2.60024098414608,1.6068392984416,4.06017016826912,4.62145851343933,6.60065801322357,9.9242332188862,3.43744783578476,5.65565106265491,5.79541066429486,8.01288320820636,1.65284915360978,2.30628080838127,4.72167036229961,2.023155617111,1.85938219718914,3.1481234683064,6.970372701606,2.15623506123262,2.66153015158511,5.21959795245044,6.30102344953328,6.01124524316363,3.34942532423701,2.84741482246853,0.953150969619124,0.255897791311334,1.71175595213568,2.22742273548156,3.92474320099615,4.49681143958287,3.29444435683266,4.3590588867904,3.43710218674637,1.58510321173008,5.47635993110675,0.975267478179181,1.21856744815642,1.05650146756755,0.818999468447914,0.141405431953713,4.52032466480971,3.30819206127675,0.66343897524122,3.06915619677634,0.578775534266688,3.9353685122798,5.68149055495571,5.88664646389525,1.40847801266121,1.43411352204052,0.294747123039363,6.4200789266625,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| |||
|short_description=p1@PALM2,p3@PALM2-AKAP2 | |||
}} |
Revision as of 02:41, 23 January 2014
Short description: | p1@PALM2, p3@PALM2-AKAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PALM2_5end, CAGE_peak_3_at_PALM2-AKAP2_5end |
Coexpression cluster: | C4788_mature_Adipocyte_heart_Hepatocyte_skeletal_mesodermal_Preadipocyte |
Association with transcript: | -42bp_to_NM_007203, NM_053016, NM_147150, uc004beh.3, uc004bei.2, uc004bej.3, uc004bek.3_5end |
EntrezGene: | 445815,114299 |
HGNC: | 15845&submit=Submit 33529, 15845 |
UniProt: | Q9Y2D5Q8IXS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.87e-13 | 76 |
fat cell | 1.01e-11 | 15 |
muscle precursor cell | 1.24e-07 | 58 |
myoblast | 1.24e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-07 | 58 |
preadipocyte | 2.71e-07 | 12 |
muscle cell | 8.37e-07 | 55 |