FFCP PHASE1:Hg19::chr9:103235365..103235419,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYR6 | |||
|association_with_transcript=0bp_to_ENST00000374879_5end | |||
|coexpression_cluster_id=C4786 | |||
|description=CAGE_peak_1_at_TMEFF1_5end | |||
|id=chr9:103235365..103235419,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.17e-10!24;CL:0002319!6.11e-10!25;CL:0002321!1.41e-09!248;CL:0000115!5.34e-09!35;CL:0000220!6.19e-09!246;CL:0000133!8.74e-09!59;CL:0002078!2.83e-08!44;CL:0000071!1.28e-07!18;CL:0002546!1.28e-07!18;CL:0000213!1.39e-07!57;CL:0000215!1.39e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.03e-12;24!CL:0002319;2.37e-10;25!CL:0000115;5.08e-10;36!CL:0000071;5.60e-09;18!CL:0000540;7.29e-07;6!CL:0000404;7.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.46e-13,24;CL:0000115,4.06e-12,36;CL:0002319,1.15e-10,25;CL:0000071,1.81e-09,18;CL:0002546,1.81e-09,18;CL:0002078,3.81e-09,45;CL:0000133,4.29e-09,59;CL:0000047,6.10e-08,8;CL:0000213,9.93e-08,58;CL:0000215,9.93e-08,58;CL:0000540,7.80e-07,6;CL:0000031,7.80e-07,6;CL:0000404,7.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.60e-09;18!UBERON:0006601;2.98e-07;82!CL:0000031;7.29e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!1.81e-09!22;DOID:2994!1.81e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.29e-11;22!DOID:2994;1.29e-11;22!DOID:171;2.73e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.63e-11,22;DOID:2994,1.63e-11,22;DOID:171,3.53e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.99e-32!94;UBERON:0001016!3.99e-32!94;UBERON:0005743!4.17e-29!86;UBERON:0001017!3.25e-28!82;UBERON:0000955!5.29e-22!69;UBERON:0006238!5.29e-22!69;UBERON:0001049!5.80e-22!57;UBERON:0005068!5.80e-22!57;UBERON:0006241!5.80e-22!57;UBERON:0007135!5.80e-22!57;UBERON:0002346!3.68e-21!90;UBERON:0003075!1.43e-19!86;UBERON:0007284!1.43e-19!86;UBERON:0000924!2.82e-19!173;UBERON:0006601!2.82e-19!173;UBERON:0003056!6.24e-19!61;UBERON:0002616!1.85e-18!59;UBERON:0001893!5.66e-18!34;UBERON:0003080!5.85e-18!42;UBERON:0002020!6.38e-18!34;UBERON:0003528!6.38e-18!34;UBERON:0004121!6.85e-18!169;UBERON:0002780!7.27e-18!41;UBERON:0001890!7.27e-18!41;UBERON:0006240!7.27e-18!41;UBERON:0000025!1.65e-17!194;UBERON:0002791!1.86e-17!33;UBERON:0001869!8.51e-17!32;UBERON:0000119!3.86e-16!312;UBERON:0000033!5.07e-16!123;UBERON:0000483!7.32e-16!309;UBERON:0000153!2.23e-15!129;UBERON:0007811!2.23e-15!129;UBERON:0004111!5.19e-15!241;UBERON:0000956!8.69e-13!25;UBERON:0000203!8.69e-13!25;UBERON:0000477!5.27e-12!286;UBERON:0002619!1.12e-11!22;UBERON:0000475!2.96e-11!365;UBERON:0001950!1.51e-10!20;UBERON:0000468!3.32e-08!659;UBERON:0001986!1.28e-07!18;UBERON:0004638!1.28e-07!18;UBERON:0004852!1.28e-07!18;UBERON:0002049!2.98e-07!79;UBERON:0007798!2.98e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.41e-20;34!UBERON:0003528;5.13e-20;34!UBERON:0002020;5.13e-20;34!UBERON:0002791;8.08e-20;32!UBERON:0001869;9.95e-20;32!UBERON:0000956;1.44e-16;25!UBERON:0000203;1.44e-16;25!UBERON:0002780;7.35e-16;41!UBERON:0001890;7.35e-16;41!UBERON:0002619;3.98e-15;22!UBERON:0000073;7.54e-15;53!UBERON:0002616;7.54e-15;53!UBERON:0001950;1.23e-13;20!UBERON:0001016;5.52e-12;83!UBERON:0001017;8.62e-12;75!UBERON:0000955;1.50e-11;68!UBERON:0004638;5.60e-09;18!UBERON:0001986;5.60e-09;18!UBERON:0004852;5.60e-09;18!UBERON:0000125;3.18e-08;9!UBERON:0002308;3.18e-08;9!UBERON:0002420;5.66e-08;9!UBERON:0007245;5.66e-08;9!UBERON:0010009;5.66e-08;9!UBERON:0010011;5.66e-08;9!UBERON:0000454;5.66e-08;9!UBERON:0009663;6.64e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.67e-36,89;UBERON:0001017,7.38e-33,81;UBERON:0002346,5.55e-28,86;UBERON:0001049,2.64e-27,56;UBERON:0005068,2.64e-27,56;UBERON:0006241,2.64e-27,56;UBERON:0007135,2.64e-27,56;UBERON:0003075,7.12e-26,82;UBERON:0007284,7.12e-26,82;UBERON:0000073,2.06e-25,53;UBERON:0002616,2.06e-25,53;UBERON:0000955,4.40e-25,68;UBERON:0006238,4.40e-25,68;UBERON:0001893,2.07e-23,34;UBERON:0003528,2.42e-23,34;UBERON:0002020,2.42e-23,34;UBERON:0003056,6.36e-23,61;UBERON:0002791,5.82e-22,32;UBERON:0001869,7.19e-22,32;UBERON:0002780,1.09e-21,41;UBERON:0001890,1.09e-21,41;UBERON:0003080,1.09e-21,41;UBERON:0006240,1.09e-21,41;UBERON:0004121,2.08e-21,171;UBERON:0000924,2.08e-21,171;UBERON:0006601,2.08e-21,171;UBERON:0010371,1.81e-18,104;UBERON:0010314,5.79e-18,132;UBERON:0000956,1.28e-16,25;UBERON:0000203,1.28e-16,25;UBERON:0000025,1.28e-16,192;UBERON:0002619,3.57e-15,22;UBERON:0004111,9.02e-14,240;UBERON:0001950,1.08e-13,20;UBERON:0000483,5.75e-11,306;UBERON:0000119,7.56e-11,309;UBERON:0004638,1.81e-09,18;UBERON:0001986,1.81e-09,18;UBERON:0004852,1.81e-09,18;UBERON:0000125,3.09e-08,9;UBERON:0002308,3.09e-08,9;UBERON:0002420,5.15e-08,9;UBERON:0007245,5.15e-08,9;UBERON:0010009,5.15e-08,9;UBERON:0010011,5.15e-08,9;UBERON:0000454,5.15e-08,9;UBERON:0011216,2.84e-07,223;UBERON:0009663,6.74e-07,7;UBERON:0003076,7.04e-07,15;UBERON:0003057,7.04e-07,15;UBERON:0000055,9.75e-07,68 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.704772020479856,1.0007329835313,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0.737201809504527,1.39560233594486,0,0.263766978228454,0.37129905888014,0,2.6893005858071,3.01347264011988,2.19093027116212,2.92759679274304,1.60057375499824,1.83600622119828,1.25381888591235,4.29353980696585,2.6006140763848,4.6450776650077,0,0.0821005894499457,0,0,0,0.77408061658038,0,0,0,0,11.0892001340189,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,1.0843174571537,0,0.144846518960824,0,0,2.26883561193763,1.99556457716308,1.66886092816939,1.44076983047484,0,0.370784442784429,0,0,0,0,0,0,1.98762407366705,5.16140757063675,1.73570250803797,4.52246353539208,5.03399323451887,2.20094433552054,2.71693456497854,10.5950871259425,12.8075854567216,10.3763389957048,8.45941565929209,5.32190474002959,11.7149787623121,3.67663080345869,3.24056779152704,1.69669483739752,1.79623498100936,3.49095589498299,1.53316637465883,2.84779697870439,6.22885929363385,0,0,0.436094052142534,2.48485975847659,1.2663051166458,0.529636723252875,1.72101972449288,2.83734705758686,1.12135520028461,0,0.74000264525148,1.55605517699883,1.61652806483626,0.980771418680752,0.302714855289863,0,0.70296429550139,0,0.570471821544449,0.896692083310806,2.58355897016283,3.0755859429945,3.37081936085396,0.204154171254893,1.47401180774122,0.619954687054593,3.56400857184616,2.96720315134268,0.910161361938026,0,2.52504170931099,2.25213335769535,0.554128230968366,0,0.919463387397059,0.45071417671979,0.907457465280168,1.25572744982203,1.70845911054854,1.69545520927649,1.20036438433761,0.92747276314595,0,0.37223371266318,1.5189869901714,0.876933046450788,0.757301322732344,2.02509777013059,10.0220555227663,0.710019185033229,1.0075209822764,0.847802961552438,0.966304265816484,0.545492241181669,0.286804595389004,17.9301348010505,23.0601796879384,14.1756610300812,12.2320044918137,10.3451548859008,9.85438869504741,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,4.42893272774789,4.20725321410337,0.4115740113314,0,0,0,0,3.97316789473185,0.368965315629341,1.54411029268673,0.219500570817251,0,0.201057944823262,0.185176890317059,1.3032332212413,0,1.44331342025273,6.72396348855446,1.52631302506568,2.88732895522148,2.77791307545966,3.99533719692656,0,0,0,0,0.297262324577456,0,0.503946384596579,0.283550194484773,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0.888970520090367,0.381988425558278,0,0,0.925447434329912,0.300343057843917,1.42913216315289,0.560655421726804,1.74384027533312,0.80672114403045,2.32689088364,0,0,3.19125739901845,0,0.514414748524284,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,2.54094624222463,15.6167824629146,17.785642693887,21.609598228131,12.7587750330633,0,0,0,1.2269149171914,0,0.542530047399471,0.623912584592421,0.356857977594324,0,0.468565659970853,0,0,0,0.664225598535437,0.368738337083406,0.60818530127658,0.391602314925481,1.37257369524342,0,0,0,0,0,1.81434175997808,1.24053903909388,0.767309866440312,2.80660094433074,1.28139149255701,0,2.57366273829772,0,0.616838775210622,1.24293207719189,0.9033987161519,0.519254429183621,1.04589340613963,1.0877350463246,0,0.552485933615378,0.34444334449382,1.0925470080403,0.917870904715969,4.06079651616671,5.16002758599579,0,0,3.0609972378934,1.13733384070897,3.74206151608334,1.29549549661284,1.54227252690289,1.08378575017541,0.501689773854853,0.509752546090077,0.831076008928724,0.895499018888713,0,0,2.05160100093111,2.95213181129735,2.27764876265012,0.412164046590889,3.84591752237042,3.30037999682352,0.574265537996172,0.650060246036521,0,1.06337790121334,0.462145851343933,0.921022048356777,0.689182862422653,0.322260734604821,0.725083469571143,1.53407929348982,1.51354460599453,0.330569830721956,0,0.255225424989168,0.30347334256665,1.39453664789186,2.83331112147576,1.3940745403212,2.7723022215848,0,3.47973196830029,0.74129687641568,0.715624433709956,0.372158369359667,0.316379424718726,0.953150969619124,0.255897791311334,0.42793898803392,0,1.56989728039846,0.359744915166629,0,0.706874414074119,1.01091240786658,0,1.68503382495592,0,0.731140468893853,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0.66343897524122,1.31535265576129,0.578775534266688,0,0.405820753925408,0.6196469961995,0.845086807596724,0.573645408816206,0.589494246078727,0.7133421029625,0.354761064070598,0.633322905892992,0,1.13841952129715,0.699869440489966,0.192444225451024,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,2.88424992044177,1.92495971052672,1.47024129588619,1.67222857613147,2.74111504655245,4.481936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| |||
|short_description=p1@TMEFF1 | |||
}} |
Revision as of 02:30, 23 January 2014
Short description: | p1@TMEFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEFF1_5end |
Coexpression cluster: | C4786_occipital_H9_parietal_Neural_duodenum_Neurons_temporal |
Association with transcript: | 0bp_to_ENST00000374879_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.46e-13 | 24 |
endothelial cell | 4.06e-12 | 36 |
neural cell | 1.15e-10 | 25 |
blood vessel endothelial cell | 1.81e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.81e-09 | 18 |
meso-epithelial cell | 3.81e-09 | 45 |
neurectodermal cell | 4.29e-09 | 59 |
neuronal stem cell | 6.10e-08 | 8 |
lining cell | 9.93e-08 | 58 |
barrier cell | 9.93e-08 | 58 |
neuron | 7.80e-07 | 6 |
neuroblast | 7.80e-07 | 6 |
electrically signaling cell | 7.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.63e-11 | 22 |
germ cell cancer | 1.63e-11 | 22 |
neuroectodermal tumor | 3.53e-07 | 10 |