FFCP PHASE1:Hg19::chr9:91926103..91926119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2000 | |||
|TSSclassifier=strong | |||
|UniProt=P33552,Q6FGI9 | |||
|association_with_transcript=0bp_to_ENST00000314355,NM_001827,uc004aqh.2_5end | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_1_at_CKS2_5end | |||
|id=chr9:91926103..91926119,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.38e-30!682;CL:0000548!1.22e-29!679;CL:0000004!1.22e-29!679;CL:0000255!1.22e-29!679;CL:0000066!3.25e-21!254;CL:0000003!4.86e-17!722;CL:0000063!1.11e-15!578;CL:0000144!8.73e-14!625;CL:0002321!1.54e-10!248;CL:0000220!6.54e-10!246;CL:0002371!6.76e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.13e-07;17!CL:0002518;4.13e-07;17!CL:1000449;8.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-21,253;CL:0002321,1.33e-10,250;CL:1000497,4.17e-07,17;CL:0002518,4.17e-07,17;CL:1000449,8.67e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.29e-44!239;DOID:162!3.88e-43!235;DOID:0050687!1.27e-22!143;DOID:0050686!2.09e-19!137;DOID:305!3.58e-18!106;DOID:2531!1.77e-14!51;DOID:0060083!1.77e-14!51;DOID:1240!1.49e-10!39;DOID:8692!6.81e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.51e-09;51!DOID:0060083;4.51e-09;51!DOID:1240;1.79e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.29e-44,239;DOID:162,3.88e-43,235;DOID:0050687,1.27e-22,143;DOID:0050686,2.09e-19,137;DOID:305,3.58e-18,106;DOID:2531,1.77e-14,51;DOID:0060083,1.77e-14,51;DOID:1240,1.49e-10,39;DOID:8692,6.81e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.58e-07;15!UBERON:0004819;8.58e-07;15!UBERON:0001285;8.58e-07;15!UBERON:0007684;8.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.67e-07,15;UBERON:0009773,8.67e-07,15;UBERON:0001231,8.67e-07,15;UBERON:0001285,8.67e-07,15;UBERON:0007684,8.67e-07,15;UBERON:0004208,8.67e-07,15 | |||
|phase1_expression=14.352591962374,28.9035707252827,20.2974341898198,31.0227224894704,42.0143428761651,40.127572108617,15.1979926900986,11.370957721683,12.0145388971926,218.21173561334,354.482993329993,162.301939492718,162.216691610499,27.3523640041703,46.0642352261803,49.7520608374314,33.1481990413187,56.2338769598277,45.3777502875172,205.119682755929,202.368685714299,89.6480503427331,176.0351320856,221.462819767927,236.020162438229,172.999950613362,196.22040878537,204.018345165057,18.4881210118985,14.5855171276941,16.255692948188,128.71897142705,68.9761554002193,30.6895828438434,298.326189434742,175.436832889478,88.0801318004542,14.9578760303607,7.82123345133553,9.76548918221333,11.4196891862361,18.1380452970629,7.21211589375722,10.7594696696878,20.0274250155069,17.7086364667106,30.215774797739,53.4518254428374,77.4265927237759,35.9615490402688,40.2172309250688,59.5935219319235,77.2230324850026,112.314334943586,176.054432572644,14.6829024843232,28.1093334559581,50.562784000144,37.0361509768792,59.6927990361534,92.0645461150619,12.5343494070952,18.1511928435685,20.0325632750366,26.4090407152011,30.6388021333215,49.2029576706504,54.0184630301998,60.4920185367434,67.3285418585861,22.3997815974346,57.8195888500477,63.9254022630587,15.2103806144598,13.3940708977977,7.12839394728478,10.89587722121,10.6625593917469,4.33959084082116,9.12040779971995,10.3436672143527,7.12390199682072,17.5996244461323,20.2071286166989,14.2321480618169,32.004766692488,12.4122755981164,22.9900975981793,21.1534359291156,28.6216126360609,19.3532409497212,18.2043528704991,23.318666915639,44.9382517168688,46.5222107274675,117.205917724909,9.24535919535015,6.6811829667358,25.4945858759391,24.2420418316483,7.17028986593899,8.99550830895993,7.79306913631645,51.1373997102947,27.3983493951599,15.2858387262699,12.7277815969557,88.7672845698929,66.200207907978,97.0183637161689,66.8767043041753,53.3237677752497,2.81744470007915,2.1403266247177,2.09071047609954,61.4136637420809,12.6462762888634,10.3088233644789,9.1087089127021,9.2383970153988,10.4173352617027,15.207232711174,10.6908334545219,7.03926361349301,4.99722906209383,6.86654030927649,6.56902397536837,10.8867641341356,16.0464117470104,9.12393744461634,24.3806866313962,116.701949588433,72.3702100034382,203.490242792511,11.5307719446255,28.9693037921647,16.7010048880731,22.8718389042239,116.561429563296,101.552064037854,104.435560189127,57.3033455302493,69.5804000638756,185.763005834999,20.7710331938997,17.7612332045253,30.0484990772635,11.2090593423511,10.8679033048224,7.80060752792086,66.9829312825796,82.5825211301879,82.966579884215,51.4430227150849,69.2174069746345,45.1193588781711,81.7170319158929,62.2784389598083,43.0477177850919,37.8234292424077,75.7319116165196,48.6574147659848,25.870578100106,155.889146066648,39.6969554462062,110.731663072259,129.104389260048,128.489699231471,76.6583187329416,44.6154859997021,89.4024510380387,5.27121669744253,11.6334079244498,109.023513035634,21.3697939228987,114.220721521451,38.3986624358335,74.8643580154404,140.448679350549,63.3565688160807,22.417289103238,40.2068103919971,33.299580787775,94.566891792921,231.788978614884,51.6128828269216,26.5040925260799,131.45432325876,123.303230347977,71.3089776930562,69.6430851371393,252.131868588163,287.000730364697,314.18845459293,62.0628680614875,233.999374478918,41.846941376185,28.5120685747693,33.6283023818837,142.89533382427,63.9570146216452,247.622423626431,190.180150205386,74.5302470652452,91.3073451432143,60.9910713640049,30.3480878991326,146.781245009067,86.4658044020315,19.4337223824896,39.8431974179976,89.4271466331519,60.9040447799174,26.0216945446085,23.8229576104435,60.7594796068558,93.4420879495895,61.5938409155639,24.3932231402093,25.3784309205535,70.2918993182896,111.43182063977,130.731216671386,57.2052125363359,56.7311930828936,51.6248271700207,330.304796198944,273.143852510581,291.298214773883,213.438112276648,250.554604919499,297.821525005877,50.0638503455411,9.64861407289328,70.4488098897651,50.6161041554857,78.6848635019848,208.574888470245,197.581256771535,225.104301911172,208.896784355154,180.839938596697,193.375554575544,173.932387526612,174.833325426683,181.21591092175,129.915360013938,171.094964040204,72.8486000056578,72.0342685789156,6.33775174109154,14.7424082501644,11.2250082269467,230.002274795033,61.9861730257292,100.538736834936,13.1700342490351,25.8524032492525,127.671794962771,65.0896769464463,143.355654336543,254.784022393497,151.547909126537,72.3405727044479,29.3521735589554,79.1128133730684,109.26458096808,76.1016608938393,105.097184928584,115.895631882808,21.1746625235162,37.2066781571388,69.2621216265474,65.6136837907439,44.0113175881012,68.3355968708303,129.143389737507,132.819709900881,95.8456697913028,164.056858219349,67.0929067180783,117.140385280536,36.1741083076573,102.003886208515,118.169581277727,47.3665647692264,59.780898077124,82.1147740908985,147.968762000083,268.506693712462,101.182557151225,174.027442904,158.253504986481,154.817121368025,17.5809533430578,21.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| |||
|short_description=p1@CKS2 | |||
}} |
Revision as of 02:04, 23 January 2014
Short description: | p1@CKS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CKS2_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 0bp_to_ENST00000314355, NM_001827, uc004aqh.2_5end |
EntrezGene: | CKS2 |
HGNC: | 2000 |
UniProt: | P33552Q6FGI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.33e-21 | 253 |
embryonic cell | 1.33e-10 | 250 |
kidney cell | 4.17e-07 | 17 |
kidney epithelial cell | 4.17e-07 | 17 |
epithelial cell of nephron | 8.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 8.67e-07 | 15 |
renal tubule | 8.67e-07 | 15 |
nephron tubule | 8.67e-07 | 15 |
nephron | 8.67e-07 | 15 |
uriniferous tubule | 8.67e-07 | 15 |
nephrogenic mesenchyme | 8.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.29e-44 | 239 |
cancer | 3.88e-43 | 235 |
cell type cancer | 1.27e-22 | 143 |
organ system cancer | 2.09e-19 | 137 |
carcinoma | 3.58e-18 | 106 |
hematologic cancer | 1.77e-14 | 51 |
immune system cancer | 1.77e-14 | 51 |
leukemia | 1.49e-10 | 39 |
myeloid leukemia | 6.81e-07 | 31 |