FFCP PHASE1:Hg19::chr9:80263624..80263669,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4382 | |||
|TSSclassifier=weak | |||
|UniProt=B1ALW3,O95837 | |||
|association_with_transcript=-392bp_to_NM_004297,uc004aku.2_5end | |||
|description=CAGE_peak_3_at_GNA14_5end | |||
|id=chr9:80263624..80263669,- | |||
|ontology_enrichment_celltype=CL:0002139!1.62e-09!24;CL:0000115!3.61e-09!35;CL:0002078!8.69e-08!44;CL:0000213!2.99e-07!57;CL:0000215!2.99e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.97e-16;24!CL:0000115;2.73e-15;36!CL:0002078;2.33e-11;45!CL:0002138;4.79e-11;6!CL:0000071;2.20e-08;18!CL:0000213;2.21e-08;58!CL:0000215;2.21e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.14e-18,36;CL:0002078,1.36e-16,45;CL:0002139,5.68e-16,24;CL:0000213,1.49e-12,58;CL:0000215,1.49e-12,58;CL:0005020,4.18e-11,6;CL:0002138,4.18e-11,6;CL:0005022,4.18e-11,6;CL:0000071,2.62e-08,18;CL:0002546,2.62e-08,18 | |||
|ontology_enrichment_development_v019=CL:0005022;4.79e-11;6!CL:0002546;2.20e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.79e-36!115;UBERON:0000477!6.61e-16!286;UBERON:0004111!1.46e-14!241;UBERON:0000025!3.86e-12!194;UBERON:0001049!5.12e-12!57;UBERON:0005068!5.12e-12!57;UBERON:0006241!5.12e-12!57;UBERON:0007135!5.12e-12!57;UBERON:0002346!5.89e-11!90;UBERON:0002616!8.55e-11!59;UBERON:0000468!9.54e-11!659;UBERON:0003075!1.37e-10!86;UBERON:0007284!1.37e-10!86;UBERON:0003080!7.52e-10!42;UBERON:0002780!1.78e-09!41;UBERON:0001890!1.78e-09!41;UBERON:0006240!1.78e-09!41;UBERON:0001893!7.19e-09!34;UBERON:0002020!1.71e-08!34;UBERON:0003528!1.71e-08!34;UBERON:0002791!1.90e-08!33;UBERON:0001869!4.19e-08!32;UBERON:0000483!6.36e-08!309;UBERON:0000467!7.54e-08!625;UBERON:0005743!7.76e-08!86;UBERON:0000119!8.84e-08!312;UBERON:0001017!9.62e-08!82;UBERON:0000480!9.65e-08!626;UBERON:0000955!1.25e-07!69;UBERON:0006238!1.25e-07!69;UBERON:0000922!2.51e-07!612;UBERON:0000073!9.60e-07!94;UBERON:0001016!9.60e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;3.67e-10;10!UBERON:0006914;1.77e-09;25!UBERON:0004638;2.20e-08;18!UBERON:0001986;2.20e-08;18!UBERON:0004852;2.20e-08;18!UBERON:0001473;5.16e-08;8!UBERON:0004536;5.16e-08;8!UBERON:0006558;5.16e-08;8!UBERON:0000487;5.65e-08;22!UBERON:0005904;2.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.88e-17,114;UBERON:0004111,2.14e-11,240;UBERON:0002465,4.19e-10,10;UBERON:0006914,1.98e-09,25;UBERON:0004638,2.62e-08,18;UBERON:0001986,2.62e-08,18;UBERON:0004852,2.62e-08,18;UBERON:0001473,4.67e-08,8;UBERON:0004536,4.67e-08,8;UBERON:0006558,4.67e-08,8;UBERON:0000487,6.62e-08,22;UBERON:0004876,2.88e-07,11;UBERON:0005904,3.78e-07,4;UBERON:0000058,3.86e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.436882744260345,0.527533956456907,0.37129905888014,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,1.18009283054671,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.02290049474824,0,0,0.289693037921647,0,0,0,0,0.351339142772504,2.22664428346111,0,0,0,0,0,0,0,0,1.19257444420023,0,0,1.13061588384802,1.25849830862972,0.275118041940067,2.71693456497854,2.84258435086262,2.49036383880697,5.35552980423472,4.02829317109147,3.80136052859256,2.19655851793353,1.10298924103761,0,1.87529429396568,1.57170560838319,2.0270066486998,0,0,0.366403487860815,0,0,0,0,0,0,0.573673241497627,0,0,0,0,2.17847724779836,1.75123873690594,3.43269996538263,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0.901428353439581,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0.4115740113314,0,6.33775174109154,0.982827216677626,3.54473944008842,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,3.3204282985047,5.09284063834272,5.70762456703795,3.95102198979638,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0.176096868026452,5.80518723514162,8.2148373447668,4.79721247020244,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.473107245101804,0.234282829985426,0,4.5481500811197,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.604780586659361,0.248107807818777,0.306923946576125,0,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0.527758144464379,3.4120015221269,2.89159298970077,2.15915916102139,7.71136263451447,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,2.16386124460217,0.0915694648183434,0,0,0,8.03419649220798,0,0,0.15350367472613,0,0,0.435050081742686,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0.372158369359667,0.632758849437452,0,0.255897791311334,0.42793898803392,0.636406495851874,0,0,0,0.235624804691373,0.404364963146632,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,2.32218398827431,2.63435914367922,0,0,0,0,0,2.63602642174982,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.383010740264733,1.48171507906718,0,0,0,0,0,0,0,0.201799707191048,0.851692475380653,7.21361223987106,7.06653757909453,5.81557880520281,4.50492682622153,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,0,1.26602474769461,0,0,0,1.9924798825107,1.10513566212459,1.0077309914171,0,0,0,0,0.179021174675609,0,1.67693789582787,0,0,0,0.278304294485554,0,0.7812832832557,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0,0,0,0,2.29133233388275,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,2.84715956464049,0,0,0,0,0.31900115973192,0.457987967009312,0.533034776018635,0,0,2.16075186470203,0,0,0,0,1.11255605286265,0,0,0,0,1.99052386215701,0.973033209536731,1.83309043480088,0,0,0,1.28062152663286,1.60515529459758,0.468528891450678,0,0,0,1.18375320854817,4.83962864194656,0.30607276163049,3.28570214068137,0,0,0,0,0,0,0,0,0.347119476670262,0,0,1.22308667769421,0.171986032471617,0,0,0,0.872901148395775,5.29536760149002,2.25980740780532,0,0,0.823040347426423,0.586654148204409,0,4.0556069000477,0,0,0,0.343189995723929,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0.837847203816763,2.52076466412852,4.30723814746088,0.399358000997982,1.71690419254628,0.89268582976749,0.604651252380536,0.720599767084807,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0.321506296930038,0.687697182986169,0,0,0,1.33649024647654,0,0.709251365692784,1.99327434912993,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,1.17241786942466,0,0.646414781807753,0.26446520348538,0,0,2.45611048905698,4.08731193259131,1.65695622138878,1.48849806543585,0,0,0,1.08803560673895,3.2589686222951,3.36980134439808,2.62298104567844,0,0,0.366078794705889,1.6274820991845,0,0.554645257684261,1.55241007353459,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.0062716070103,3.55924488638614,0.457680136793847,0.604923695052956,0,0.295710299979268,0.796483835818512,0,0.155262956876259,0,0,1.04349012362347,0,0,0.406870733204662,0.727394636810238,0.429642228169954,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0.308801447160972,0.657852148736121,0,0,0.506827321959218,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2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| |||
|short_description=p3@GNA14 | |||
}} |
Revision as of 01:49, 23 January 2014
Short description: | p3@GNA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNA14_5end |
Coexpression cluster: | NA |
Association with transcript: | -392bp_to_NM_004297, uc004aku.2_5end |
EntrezGene: | GNA14 |
HGNC: | 4382 |
UniProt: | B1ALW3O95837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.14e-18 | 36 |
meso-epithelial cell | 1.36e-16 | 45 |
endothelial cell of vascular tree | 5.68e-16 | 24 |
lining cell | 1.49e-12 | 58 |
barrier cell | 1.49e-12 | 58 |
lymphangioblast | 4.18e-11 | 6 |
endothelial cell of lymphatic vessel | 4.18e-11 | 6 |
vascular lymphangioblast | 4.18e-11 | 6 |
blood vessel endothelial cell | 2.62e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.62e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.88e-17 | 114 |
anatomical conduit | 2.14e-11 | 240 |
lymphoid system | 4.19e-10 | 10 |
squamous epithelium | 1.98e-09 | 25 |
blood vessel endothelium | 2.62e-08 | 18 |
endothelium | 2.62e-08 | 18 |
cardiovascular system endothelium | 2.62e-08 | 18 |
lymphatic vessel | 4.67e-08 | 8 |
lymph vasculature | 4.67e-08 | 8 |
lymphatic part of lymphoid system | 4.67e-08 | 8 |
simple squamous epithelium | 6.62e-08 | 22 |
urogenital ridge | 2.88e-07 | 11 |
duct of male reproductive system | 3.78e-07 | 4 |
duct | 3.86e-07 | 19 |