FFCP PHASE1:Hg19::chr8:145009825..145009834,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1217 | |||
|description=CAGE_peak_at_chr8:145009825..145009834,- | |||
|id=chr8:145009825..145009834,- | |||
|ontology_enrichment_celltype=CL:0002076!1.25e-25!43;CL:0000223!2.21e-20!59;CL:0002621!2.95e-17!3;CL:0002251!9.06e-16!21;CL:0000240!3.25e-15!6;CL:0000311!3.25e-15!6;CL:0000079!3.25e-15!6;CL:0000237!3.25e-15!6;CL:0000036!3.25e-15!6;CL:0000357!3.25e-15!6;CL:0000114!3.25e-15!6;CL:0002159!3.82e-15!13;CL:0002368!9.28e-15!13;CL:0000066!1.26e-14!254;CL:0002327!4.12e-13!4;CL:0000362!1.64e-11!8;CL:0000622!6.91e-11!5;CL:0000312!1.10e-10!5;CL:0002202!4.57e-10!9;CL:0002632!4.57e-10!9;CL:0000154!3.81e-09!6;CL:0002328!1.46e-08!3;CL:0002623!1.52e-08!3;CL:0000220!1.17e-07!246;CL:0002321!1.47e-07!248;CL:0002077!2.14e-07!33;CL:0002336!5.57e-07!1;CL:0002261!5.57e-07!1;CL:0002170!5.57e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002328;3.27e-23;3!CL:0002327;8.69e-18;4!CL:0000312;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0002202;1.12e-08;9!CL:0000362;1.12e-08;9!CL:0002632;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,4.09e-23,3;CL:0002327,7.35e-18,4;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000362,1.12e-08,9;CL:0002202,1.21e-08,9;CL:0002632,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!3.61e-24!21;UBERON:0000165!1.61e-21!28;UBERON:0000930!1.61e-21!28;UBERON:0001004!3.35e-18!72;UBERON:0001949!2.95e-17!3;UBERON:0001828!6.26e-17!8;UBERON:0001444!4.98e-14!48;UBERON:0000161!8.92e-14!35;UBERON:0001911!4.12e-13!4;UBERON:0005333!4.12e-13!4;UBERON:0008425!4.12e-13!4;UBERON:0005311!4.12e-13!4;UBERON:0003102!2.19e-11!95;UBERON:0003729!1.52e-10!5;UBERON:0004119!1.53e-09!169;UBERON:0000925!1.53e-09!169;UBERON:0006595!1.53e-09!169;UBERON:0004807!6.58e-09!28;UBERON:0004815!1.46e-08!3;UBERON:0002031!1.46e-08!3;UBERON:0004121!1.88e-08!169;UBERON:0000924!3.64e-08!173;UBERON:0006601!3.64e-08!173;UBERON:0001007!2.00e-07!155;UBERON:0001555!2.00e-07!155;UBERON:0007026!2.00e-07!155;UBERON:0000344!2.18e-07!12;UBERON:0000076!8.91e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.27e-23;3!UBERON:0002031;3.27e-23;3!UBERON:0001911;8.69e-18;4!UBERON:0002185;1.60e-14;5!UBERON:0000485;8.99e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.09e-23,3;UBERON:0002031,4.09e-23,3;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0002185,1.83e-14,5;UBERON:0000076,1.24e-09,8;UBERON:0000485,1.21e-08,9;UBERON:0005153,2.92e-08,37;UBERON:0005157,1.00e-06,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75600456653801,0,0.603173834469785,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.179117045405697,0.290633938513962,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:145009825..145009834,- | |||
}} |
Revision as of 00:22, 23 January 2014
Short description: | p@chr8:145009825..145009834, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:145009825..145009834, - |
Coexpression cluster: | C1217_Mammary_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Gingival_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 4.09e-23 | 3 |
mammary gland epithelial cell | 7.35e-18 | 4 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
epidermal cell | 1.12e-08 | 9 |
epithelial cell of tracheobronchial tree | 1.21e-08 | 9 |
epithelial cell of lower respiratory tract | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.09e-23 | 3 |
epithelium of bronchus | 4.09e-23 | 3 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
bronchus | 1.83e-14 | 5 |
external ectoderm | 1.24e-09 | 8 |
simple columnar epithelium | 1.21e-08 | 9 |
epithelial bud | 2.92e-08 | 37 |
epithelial fold | 1.00e-06 | 47 |