FFCP PHASE1:Hg19::chr8:126104129..126104139,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26513 | |||
|TSSclassifier=strong | |||
|UniProt=E5RG00 | |||
|association_with_transcript=8bp_to_ENST00000518146_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_NSMCE2_5end | |||
|id=chr8:126104129..126104139,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.70e-15!45;CL:0002057!3.39e-15!42;CL:0000766!4.06e-15!76;CL:0000839!1.08e-14!70;CL:0000738!5.70e-14!140;CL:0002031!9.21e-14!124;CL:0000557!5.09e-13!71;CL:0002194!1.47e-12!63;CL:0000576!1.47e-12!63;CL:0000040!1.47e-12!63;CL:0000559!1.47e-12!63;CL:0002009!2.35e-12!65;CL:0000037!9.62e-12!172;CL:0000566!9.62e-12!172;CL:0002087!1.25e-11!119;CL:0002032!1.43e-11!165;CL:0000837!1.43e-11!165;CL:0000763!1.15e-10!112;CL:0000049!1.15e-10!112;CL:0000988!3.73e-10!182;CL:0000219!1.21e-08!390;CL:0000134!1.03e-07!358;CL:0002320!3.79e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-36;33!CL:0002057;2.00e-36;33!CL:0000473;1.92e-26;39!CL:0000234;1.92e-26;39!CL:0000576;1.87e-21;48!CL:0000766;1.92e-14;69!CL:0000763;1.54e-07;100!CL:0002087;6.86e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.22e-36,42;CL:0002057,2.22e-36,42;CL:0000473,1.15e-32,48;CL:0000234,1.15e-32,48;CL:0000766,5.60e-29,72;CL:0000839,8.33e-27,66;CL:0002009,2.85e-26,61;CL:0002194,1.03e-25,59;CL:0000576,1.03e-25,59;CL:0000040,1.03e-25,59;CL:0000559,1.03e-25,59;CL:0000557,9.25e-25,67;CL:0000763,3.61e-22,108;CL:0000049,3.61e-22,108;CL:0002031,2.96e-18,120;CL:0000738,9.48e-18,136;CL:0002032,3.97e-17,161;CL:0000837,3.97e-17,161;CL:0000037,1.02e-16,168;CL:0000988,6.21e-16,177;CL:0002087,2.36e-15,115;CL:0000219,1.91e-08,386;CL:0000134,2.35e-08,354;CL:0002320,7.19e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-26;42!CL:0000049;5.36e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.59e-12!86;UBERON:0004765!3.35e-12!101;UBERON:0001434!3.35e-12!101;UBERON:0002371!8.83e-11!80;UBERON:0002405!5.41e-08!115;UBERON:0002390!3.24e-07!102;UBERON:0003061!3.24e-07!102;UBERON:0002384!5.79e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.58e-22,82;UBERON:0002371,4.68e-22,76;UBERON:0002405,1.55e-19,93;UBERON:0004765,1.56e-19,90;UBERON:0002390,6.41e-17,98;UBERON:0003061,6.41e-17,98;UBERON:0001434,1.75e-16,100;UBERON:0002193,2.79e-15,108;UBERON:0002384,1.14e-07,371;UBERON:0002204,1.67e-07,167 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0.783556884599516,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0.85870796139317,0.273748850145768,0.376627918784408,0.0764134057479513,0.246301768349837,0.314843125254717,1.57345710739562,1.15148819429164,1.70297735647684,0,0,0,0.46480320348181,0.284338464974843,1.46800219667424,2.21598163412751,1.40381113229099,1.30206522429511,0.895661896959697,0.647787332037959,0.257575567634187,0.872389432677388,0.755751887377619,1.94067248950253,2.09186133215116,6.16751832032739,8.6717783850629,3.16461631554365,3.58624989140741,8.98632473576624,4.13694816883942,12.9096936716765,27.0852973188684,1.50593871634084,10.3704337021981,9.43838634669355,4.59125838556354,6.41858054152187,10.8687311385837,0.329851300186716,3.19141852194611,1.70489900213078,1.45104619314292,3.40431134814684,9.9651559839292,4.77372463987812,6.77927793946262,11.9453864587814,0.605399502633369,6.2607198117886,7.27863491114034,0.211255286311942,0.212604299965044,0.209658645508376,1.12328631146495,0.450530678524519,0.64290234678832,0,0.19891667719909,0,0,1.09227722252426,0.889509253863555,1.28019066769952,0.400395987036012,0.574752439954483,0,0,0,0,0,1.32171328579026,1.68152568894461,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0.668745981562712,0.651844533267181,0.473447805734733,0,1.22551502573691,0.883817722424512,0.221533894583621,0.270803863765016,0.512365278902701,0.260118695119756,0,0.552700035571697,1.15921234294021,0.444859689486181,0.802622484269139,1.04535523804977,2.15287751125376,0.766440987203842,0.34362744548263,0,0.637130828648193,0.651083453856419,0,0.301150238155546,0.511946444617674,0,1.18388626022008,0.821127996921047,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0.383587685530591,0,0,0.579386075843295,1.5905718941022,0.973269740605272,0.945348171640679,0.443458794925128,0.175669571386252,0.72038491523742,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,1.06729878806013,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,1.31780417436063,3.87780264148325,0,0.993943903390637,0.379891534993739,1.05927344650575,1.72101972449288,1.06400514659507,1.12135520028461,0,0.49333509683432,0.311211035399766,0.538842688278752,0.817309515567294,0.302714855289863,0,0,0,0,0.298897361103602,0.23486899728753,0.485618833104395,0.280901613404497,0,0.245668634623536,0.206651562351531,2.37600571456411,0,0,0,0.505008341862199,0.125118519871964,0.554128230968366,0.438977620880838,0.612975591598039,0.150238058906597,0.907457465280168,0.717558542755448,0.213557388818567,0,0.900273288253207,0.824420233907511,0.257640540045629,0.18611685633159,0.337552664482532,0.389748020644795,0.757301322732344,0.460249493211497,0.161646056818812,0.710019185033229,0.503760491138201,0.169560592310488,0,0.272746120590835,0.573609190778008,1.09776335516636,0.795178609928912,0.580969714347592,0.310983165046111,0,2.18986415445498,0,0,0,0.464367928031979,0,0.946454400318751,0.674338760312407,0.241011029883482,0.55146986366197,1.08939722046203,0.71181185733329,0.269662616320329,0.196221465125346,1.53898862778556,0,0,0,1.47008711385542,0,0.982827216677626,0,0.882926198829301,0.737930631258681,0.514703430895577,0.219500570817251,0,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.927443239800615,0.821860859650752,0.866198686566443,0,0.190254152234598,0.790204397959275,2.57545848628462,0.492434012174795,0.468008530278475,0.445893486866185,0.93733833986777,0,0.850650583454319,0.358234090811393,0.581267877027924,0,2.46331618947972,0.792435906119034,0.621984346622316,0.576479813667846,0.88369703398466,0.761974731506028,0.381988425558278,0,0,0.616964956219941,0.901029173531752,0.285826432630578,0.112131084345361,0.43596006883328,0.36669142910475,0.775630294546667,0,0.845302752556,0.797814349754612,0,0,0,0,0.57191197463259,0,2.46972101034231,0.65147236858747,0.710783897485092,0,0.301439377059586,0.871533458600294,0.399891964728228,1.2162378064119,0,0,1.19812427745791,0,1.42636905040718,0.289562613335158,1.02738161275192,0.716243852959582,1.68127715990291,0.394061520403854,0.646882724578552,0.513372145118994,0.254094624222463,0,0,0.502548796003046,1.91381625495949,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.892144943985809,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.260650843404249,0.195801157462741,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0.907170879989041,0.496215615637554,1.2276957863045,0.561320188866147,0.640695746278505,0.511707249066704,0.482561763430822,1.48418066444991,0.308419387605311,0.355123450626254,0.246381468041427,0.519254429183621,0.232420756919918,0.483437798366489,0.40101294060657,0,0.459257792658427,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,1.46139224653261,0.633309773357254,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,1.31555925987561,1.0457418040996,0.769350375349168,0.328014645699706,0.976135183992909,0.309123034943167,0.915694648183434,1.32015199872941,0,0,1.6068392984416,0,0.308097234229289,0.15350367472613,0.689182862422653,0.214840489736547,0.435050081742686,0.426133137080504,0.178064071293475,0,0.384380134730212,1.02090169995667,0.2023155617111,0,0,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0.286249773483982,0,0.949138274156178,0.571890581771475,0,0,0.636406495851874,0,0.899362287916574,0.54907405947211,0.942499218765491,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.409499734223957,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.430234056612155,0.294747123039363,0,0,0.633322905892992,0.658589785919804,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0.371606350251437,1.44269212976445,0.426851060090485,0.797131363644112,0.399158742865633,0.766021480529467,0.635020748171649,0.649243880549111,0.280797178113459,0.912938716132769,0.156679895773023,0,1.01575066680962,0,0,0,0,0.307240764308458,0.447352215784832,1.16794399198336,0.390776190804081,0.835218521685727,0,1.35227839237992,0,0,0,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0.445234820091624,0.494411622680279,1.26675244876796,0,0.276283915531148,1.51159648712566,3.78394125257973,0.246169610922139,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0.74214478529481,0,0.7812832832557,0.174919999992391,0.724999575434793,0.568967241427498,0.254253650292766,0,0,0,1.38899995946634,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0.219385397153973,0.21787692703798,0.41827123283581,0.615602068030377,0.91153644677601,0,0.179515288819544,0.434589487688032,0,0.274792780205587,0,1.02193298195737,0.470940769185074,0.498635045700469,0.225595660617181,0,0,0,0.794682894901893,0.421996129056054,0.489698424477443,0.424059214301822,0,0.995261931078505,0.265372693510018,0,0.593042257361244,0.247127877893006,0.313265848516366,0.606610196826093,0,0.468528891450678,0.547364367646998,0.19566461893209,0.485560759068186,0,0,0,0.63186579628488,1.50323419414493,0.518440956986236,0,0.661983911750998,0,0,0,0.138674673013139,0.173559738335131,0.391969589657511,0.609414446062818,0.17472666824203,0.51595809741485,0.483781656445426,0.511625219603299,1.06750094169172,0.0969890164884194,0.441280633457501,0.451961481561065,0,0.794858446811959,0.253243183823515,0.782205530939212,0,0,0,0.288180834308212,0.114536596165916,1.02956998717179,0,0.248505071130865,0.235694034616795,0.271808412147228,0.313808538937,0.407992870545287,0.577901179803038,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0,0.798716001995964,0,0,0.739018197353989,0,0,0.86661500537946,0.824158583811665,0.808842526250219,0.393709926058995,1.18542664892098,0,0.408610218334727,0.803765742325096,0.550157746388935,0.83088067605837,1.349843349309,0,0.364497339948148,1.67717343799633,0.236417121897595,0.472091293214983,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0.5085370753095,0,0,1.30634944043764,0,1.72394293573612,0.170388021785422,0.566560457600628,0,0,0.387848869084652,1.3223260174269,0.513260513652988,0.704815022316672,0.320362237703084,0.628817220398664,0.828478110694391,0,0.988058159489721,0.974340787047167,0,0.544017803369474,0.2506898940227,0.612691153526923,0,0.157054096250234,1.77213635993397,0.488105059607853,0.1251909307065,0,0.887432412294818,0.124192805882767,0.830091809617385,1.12482367165896,0.303298235083296,1.42732666772484,0.235265819698172,0,1.01444720027578,0.298509605773748,1.8697064787778,0.554805861502613,0.378806010550178,0.50313580350515,0,0.915360273587694,0.453692771289717,0.932623203496683,0.295710299979268,0.477890301491107,0,0.621051827505038,0,0.265841714557995,0.521745061811734,0.300515217994437,0,0.406870733204662,0.727394636810238,0.214821114084977,1.39210127963548,0,1.20008329398946,0.343395705182793,1.34699795506368,0,0.192619830407303,1.07220795687463,0,0.226705925512272,0,0.97894681802587,0.537266523244462,0.926404341482917,0.219284049578707,0,1.3503982678964,0.675769762612291,0,0.345430341731199,0.607719912354764,0.553033744606923,0.584580926518165,0.398594520940089,0.327130788511688,0.655219697692825,0.245772908753719,0.633936370075881,1.19992437512958,0.640150378164845,0.688859918643263,0,0.184105950251841,0.139879507719444,0.622077260032973,0,0.431299245586727,1.72992536041486,0.218419276384028,0.678930119816101,0.425149840203366,0.743614585554013,0,0.636008701306837,0.788617450012533,0.80057074828547,0.705351887381368,1.531227386766,0.642292250964595,0,0.478901577171454,0,1.26035848110859,0.414943514785307,0.161475645631851,0,0.490738592505128,0.353909170043221,0.550285795565037,0.808679663052368,0,0.690359926060101,2.58591088751157,0.451261970095544,0.60511520611056,0,0,0,0.295712172434091,0.337687923091973,0.781078098613847,0.620060389503552,0.0634158101939068,0.546974809018219,0,0,0.527613733078862,0.766574565837572,0,0.672567444437648,1.21393120847326,1.13831095675649,0.177404740325278,0.806637912890455,0,0.815636795721981,0.131545547125698,0.118193840883968,0.778619813244484,0.235479278551542,0.314231179832004,0.560544326627578,0,0,0,0.428859265059938,1.89616334079272,0,0.521574816907738,0,0.414432328326074,0.3414369541879,0,0,0.828324005113957,0.596493833314104,0.423387050190929,0.4582137370881,0,0,0.223710863595585,0.490751168076215,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0.467878926924211,1.19370465096821,0.594600453887843,0.33883824611688,0,0.754814217833368,0.154348316215889,0.218559560503957,0,0,0,0.588925401344836,0,0,0.339854229375634,0.281951753939561,0.644578879735772,0.199882311849858,0.892769693028288,0,0.320965466756673,0,0,0,0.631086248772738,0.203974470572744,0.436350690340377,0.5290268405154,0.743990036333503,0.924351257262837,0.432626562123789,0.126166424835079,0.218531143927391,0.633492505057185,0.305966489225945,0,0.275684698604535,0.50141507858475,0.303114792872958,0,0,0.310298987585686,0.426467963801962,0.23806443146374,0.258355639344024,1.11734485732544,0,0.509177266225319,0.606351566874658,0.435433495793923,0.342233301085281,0.471464371102113,0.143444410785353,0.99798106963804,0.325613074443898,0.747091421144008,0,0.538951212639521,0,0.488965776731466,1.62758471326295,0,0,0 | |||
|short_description=p3@NSMCE2 | |||
}} |
Revision as of 23:41, 22 January 2014
Short description: | p3@NSMCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NSMCE2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 8bp_to_ENST00000518146_5end |
EntrezGene: | NSMCE2 |
HGNC: | 26513 |
UniProt: | E5RG00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.22e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-36 | 42 |
defensive cell | 1.15e-32 | 48 |
phagocyte | 1.15e-32 | 48 |
myeloid leukocyte | 5.60e-29 | 72 |
myeloid lineage restricted progenitor cell | 8.33e-27 | 66 |
macrophage dendritic cell progenitor | 2.85e-26 | 61 |
monopoietic cell | 1.03e-25 | 59 |
monocyte | 1.03e-25 | 59 |
monoblast | 1.03e-25 | 59 |
promonocyte | 1.03e-25 | 59 |
granulocyte monocyte progenitor cell | 9.25e-25 | 67 |
myeloid cell | 3.61e-22 | 108 |
common myeloid progenitor | 3.61e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 2.96e-18 | 120 |
leukocyte | 9.48e-18 | 136 |
hematopoietic oligopotent progenitor cell | 3.97e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-17 | 161 |
hematopoietic stem cell | 1.02e-16 | 168 |
hematopoietic cell | 6.21e-16 | 177 |
nongranular leukocyte | 2.36e-15 | 115 |
motile cell | 1.91e-08 | 386 |
mesenchymal cell | 2.35e-08 | 354 |
connective tissue cell | 7.19e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.58e-22 | 82 |
bone marrow | 4.68e-22 | 76 |
immune system | 1.55e-19 | 93 |
skeletal element | 1.56e-19 | 90 |
hematopoietic system | 6.41e-17 | 98 |
blood island | 6.41e-17 | 98 |
skeletal system | 1.75e-16 | 100 |
hemolymphoid system | 2.79e-15 | 108 |
connective tissue | 1.14e-07 | 371 |
musculoskeletal system | 1.67e-07 | 167 |