FFCP PHASE1:Hg19::chr8:122653664..122653693,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4819 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETI9 | |||
|association_with_transcript=0bp_to_ENST00000443194_5end | |||
|coexpression_cluster_id=C2007 | |||
|description=CAGE_peak_1_at_HAS2_5end | |||
|id=chr8:122653664..122653693,- | |||
|ontology_enrichment_celltype=CL:0000055!3.20e-44!180;CL:0000680!4.21e-21!57;CL:0000056!4.21e-21!57;CL:0000355!4.21e-21!57;CL:0000393!1.02e-20!60;CL:0000211!1.02e-20!60;CL:0000057!1.77e-20!75;CL:0000187!2.14e-19!54;CL:0000183!8.24e-18!59;CL:0000192!8.84e-16!42;CL:0000514!8.84e-16!42;CL:0000359!3.61e-13!32;CL:0002620!1.33e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.27e-13;32!CL:0000192;1.66e-12;43!CL:0002620;6.45e-12;23!CL:0000187;7.92e-12;55!CL:0000393;2.10e-11;61!CL:0000211;2.10e-11;61!CL:0000723;2.54e-09;61!CL:0000057;3.03e-09;73!CL:0000134;8.17e-09;55!CL:0002320;2.90e-08;188!CL:0000048;3.45e-08;58!CL:0000034;1.34e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.43e-23,76;CL:0000680,7.50e-23,58;CL:0000056,7.50e-23,58;CL:0000355,7.50e-23,58;CL:0000393,1.81e-22,61;CL:0000211,1.81e-22,61;CL:0000187,7.10e-21,55;CL:0000192,3.32e-17,43;CL:0000514,3.32e-17,43;CL:0000359,4.38e-14,32;CL:0000048,2.23e-13,427;CL:0000034,2.68e-13,441;CL:0000723,2.15e-12,433;CL:0002620,8.04e-12,23 | |||
|ontology_enrichment_development_v019=CL:0000355;3.89e-13;58!CL:0000514;1.66e-12;43 | |||
|ontology_enrichment_disease=DOID:2394!2.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.09e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.04e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.77e-27!83;UBERON:0002329!3.77e-27!83;UBERON:0003077!3.77e-27!83;UBERON:0003059!3.77e-27!83;UBERON:0007282!3.77e-27!83;UBERON:0009618!3.77e-27!83;UBERON:0007285!3.77e-27!83;UBERON:0004290!1.55e-23!70;UBERON:0000486!6.57e-23!82;UBERON:0002385!1.66e-20!63;UBERON:0001015!1.66e-20!63;UBERON:0000383!1.66e-20!63;UBERON:0001134!1.69e-20!61;UBERON:0002036!1.69e-20!61;UBERON:0003082!1.69e-20!61;UBERON:0005256!4.16e-16!143;UBERON:0003102!1.61e-14!95;UBERON:0000475!9.87e-14!365;UBERON:0000481!1.34e-12!347;UBERON:0002199!1.10e-11!45;UBERON:0002416!1.10e-11!45;UBERON:0002097!6.85e-10!40;UBERON:0000468!6.89e-10!659;UBERON:0003104!1.12e-09!238;UBERON:0009142!1.12e-09!238;UBERON:0002100!4.00e-09!216;UBERON:0001637!7.26e-09!42;UBERON:0003509!7.26e-09!42;UBERON:0004572!7.26e-09!42;UBERON:0004573!1.33e-08!33;UBERON:0004571!1.33e-08!33;UBERON:0004872!1.52e-08!84;UBERON:0000483!4.96e-08!309;UBERON:0000119!9.26e-08!312;UBERON:0000490!3.57e-07!138;UBERON:0000948!4.78e-07!24;UBERON:0005498!4.78e-07!24;UBERON:0004140!4.78e-07!24;UBERON:0009881!4.78e-07!24;UBERON:0004141!4.78e-07!24;UBERON:0003084!4.78e-07!24;UBERON:0007005!4.78e-07!24;UBERON:0004139!4.78e-07!24;UBERON:0004291!4.78e-07!24;UBERON:0000467!5.22e-07!625;UBERON:0000480!7.44e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.28e-10;31!UBERON:0001015;1.28e-10;31!UBERON:0000383;1.28e-10;31!UBERON:0004573;1.63e-09;33!UBERON:0004571;1.63e-09;33!UBERON:0002204;2.58e-08;70!UBERON:0002097;3.74e-08;41!UBERON:0002199;8.64e-08;46!UBERON:0002416;8.64e-08;46!UBERON:0001637;1.28e-07;42!UBERON:0003509;1.28e-07;42!UBERON:0004572;1.28e-07;42!UBERON:0002384;1.54e-07;198!UBERON:0003102;2.40e-07;50!UBERON:0000948;4.02e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,8.66e-25,71;UBERON:0003059,8.66e-25,71;UBERON:0007282,8.66e-25,71;UBERON:0004290,8.66e-25,71;UBERON:0009618,8.66e-25,71;UBERON:0003077,4.44e-24,72;UBERON:0007285,4.44e-24,72;UBERON:0000486,7.25e-24,83;UBERON:0007524,2.16e-23,73;UBERON:0001134,8.67e-22,62;UBERON:0002036,8.67e-22,62;UBERON:0003082,8.67e-22,62;UBERON:0002385,2.88e-21,64;UBERON:0001015,2.88e-21,64;UBERON:0000383,2.88e-21,64;UBERON:0007503,6.87e-21,78;UBERON:0005256,7.43e-15,122;UBERON:0003102,1.07e-14,99;UBERON:0002199,3.06e-12,46;UBERON:0002416,3.06e-12,46;UBERON:0003104,4.18e-12,160;UBERON:0009142,4.18e-12,160;UBERON:0001637,1.92e-11,42;UBERON:0003509,1.92e-11,42;UBERON:0004572,1.92e-11,42;UBERON:0004872,6.25e-11,83;UBERON:0004573,9.72e-11,33;UBERON:0004571,9.72e-11,33;UBERON:0002097,3.48e-10,41;UBERON:0000490,3.67e-10,148;UBERON:0007500,5.57e-09,59;UBERON:0001981,5.57e-09,59;UBERON:0004537,5.57e-09,59;UBERON:0006965,5.57e-09,59;UBERON:0002049,8.49e-08,78;UBERON:0007798,8.49e-08,78;UBERON:0000948,1.08e-07,24;UBERON:0005498,1.08e-07,24;UBERON:0004140,1.08e-07,24;UBERON:0009881,1.08e-07,24;UBERON:0004141,1.08e-07,24;UBERON:0003084,1.08e-07,24;UBERON:0007005,1.08e-07,24;UBERON:0004139,1.08e-07,24;UBERON:0004291,1.08e-07,24;UBERON:0000055,6.26e-07,68;UBERON:0004535,6.97e-07,109 | |||
|phase1_expression=4.1786027232228,8.77812147953031,0.845726424575827,3.00219895059391,1.78784437770915,0,7.59899634504932,1.89515962028049,5.74608382039645,11.5494950155709,0.697801167972428,0,0.791300934685361,23.2680743564888,8.28493439319789,4.03395087871065,1.20538905604795,2.92124036154949,2.43966399395253,0.738726348460727,0,2.19418305034661,0.85870796139317,0.273748850145768,0.251085279189606,0,0,0,0,0,1.54816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.767175371061182,24.5778623621505,30.0802746381534,9.41502373245354,54.0794443994748,10.2193322763554,1.60709189178915,1.10864698731282,1.49319135678314,0.196468613246569,0,0,0,0,0,0,0,0,0,3.4409383804245,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,7.34456967654563,24.7605168120719,22.0864197976587,23.4081132250916,2.24271040056923,1.06748995729705,13.813382711361,16.8053959115874,8.89090435659941,6.21155231831143,0.605429710579726,4.60940739583999,2.81185718200556,0.624320153660641,5.70471821544449,1.04614076386261,22.0776857450278,27.8421464313186,25.0002435930002,7.55370433643105,0.737005903870608,11.5724874916857,34.4520828611796,11.1270118175351,2.73048408581408,1.43723628363248,3.36672227908132,3.87867411603089,20.2256804303454,43.458784467203,73.5570709917647,22.6859468948961,2.94923676216055,31.9313551526174,23.4913127700424,39.2074017145189,48.0145753735044,36.1714377626921,17.2619161830572,24.5674250357699,251.645511371728,79.1188481908933,28.5250164895849,39.673506314831,7.43571861366535,30.1758153639122,31.5354067452514,25.2645282542627,1.35282597214308,1.63647672354501,5.73609190778008,5.48881677583179,6.22889911110981,33.4638555464213,9.32949495138334,13.8776467981596,4.74470566798579,39.112383082454,28.302601280487,8.28809528114883,28.3264436099507,10.8281922250438,0.354920400119532,0.505754070234305,0.482022059766964,0.220587945464788,0.435758888184812,0.237270619111097,0,0.196221465125346,0,0,14.0241773803446,0,0,0,0,0,0,0.614942192715568,10.6372042385086,0.658501712451753,0,0.201057944823262,0,1.3032332212413,3.11980435583874,0,1.85488647960123,7.16193034838512,0,0,0,0,0,0,0,0,0.93733833986777,9.57498130733499,12.9015338490572,0.358234090811393,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0,0.25248486685276,0.190493682876507,0,0,10.2643467613623,0.925447434329912,0,0,0.112131084345361,0,0.07333828582095,3.36106460970222,3.57656445851882,33.81211010224,1.06375246633948,0,3.34369586540785,1.41849132023278,2.39779961114489,8.00676764485626,1.62786481617433,1.64648067356154,50.8148447498227,6.04166312862328,40.3895455196049,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,109.830416881353,113.508544427382,9.8628634824184,239.046385925261,0,0,0,0,0.76228387266739,2.60279707715243,3.09315525111078,2.01019518401218,5.74144876487847,0,0,0,19.9987131502198,1.00034104211935,2.71265023699736,2.28767947683888,10.3488813502354,2.36553622550902,6.91134348457008,6.3198680942821,0,6.2083842775503,67.0867854520791,58.4450264277199,4.60483156680839,1.17480694477644,2.40200396667599,0,0,0,0,1.66435439510497,1.5119514666484,1.73675465473144,13.6581156226376,4.2099014164961,0.512556597022804,2.55853624533352,2.89537058058494,1.48418066444991,140.793450441825,112.574133848523,191.192019200148,64.9068036479526,144.333290047269,1.32945394550784,14.4364658618365,0.0920809889358963,8.4962691641809,7.10155555226196,2.49136388422906,0,0.462092022626489,0.784349769176855,0,0.844413031143006,0,0,0.647747748306418,0,1.35473218771926,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0.325378394664303,1.03041011647722,0.0915694648183434,0.330037999682352,25.8419492098278,0.650060246036521,11.2478750890912,17.2073878559977,3.54311819363682,6.90766536267583,47.1401077897095,11.9236471803784,9.42608510442485,11.1646881915092,6.58837063785856,0.165284915360978,0.192190067365106,0,0,89.7151910143762,149.850677091385,111.525963225696,5.85263802334569,22.8891593036319,96.5625621203331,10.9341289271313,27.1937284809783,1.86079184679834,0.316379424718726,0.953150969619124,10.747707235076,22.2528273777639,10.18250393363,10.9892809627892,9.89298516708231,4.66712950551293,15.0799875002479,24.0597153072246,15.8510321173008,17.2715967057982,1.95053495635836,72.870333399754,15.8475220135133,7.09799539321526,0.565621727814851,13.5609739944291,31.4278245821291,41.7966554401968,32.0069146235247,4.05142873986681,12.462000288886,13.7979056334639,14.871527908788,23.6624306127083,35.8528380510129,3.14396931241988,12.4834868018438,41.5070444962599,15.8330726473248,4.61012850143863,5.69209760648573,12.5976499288194,0.0962221127255121,0,0,0.847294206991012,1.29151611801369,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87904907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| |||
|short_description=p1@HAS2 | |||
}} |
Revision as of 23:34, 22 January 2014
Short description: | p1@HAS2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HAS2_5end |
Coexpression cluster: | C2007_liposarcoma_Fibroblast_Myoblast_Preadipocyte_mesenchymal_basal_Smooth |
Association with transcript: | 0bp_to_ENST00000443194_5end |
EntrezGene: | HAS2 |
HGNC: | 4819 |
UniProt: | E7ETI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.43e-23 | 76 |
muscle precursor cell | 7.50e-23 | 58 |
myoblast | 7.50e-23 | 58 |
multi-potent skeletal muscle stem cell | 7.50e-23 | 58 |
electrically responsive cell | 1.81e-22 | 61 |
electrically active cell | 1.81e-22 | 61 |
muscle cell | 7.10e-21 | 55 |
smooth muscle cell | 3.32e-17 | 43 |
smooth muscle myoblast | 3.32e-17 | 43 |
vascular associated smooth muscle cell | 4.38e-14 | 32 |
multi fate stem cell | 2.23e-13 | 427 |
stem cell | 2.68e-13 | 441 |
somatic stem cell | 2.15e-12 | 433 |
skin fibroblast | 8.04e-12 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.04e-08 | 14 |