FFCP PHASE1:Hg19::chr8:107593246..107593259,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15822 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000521963_5end | |||
|coexpression_cluster_id=C2387 | |||
|description=CAGE_peak_14_at_OXR1_5end | |||
|id=chr8:107593246..107593259,+ | |||
|ontology_enrichment_celltype=CL:1000497!2.43e-15!18;CL:0002518!2.43e-15!18;CL:1000507!2.87e-13!12;CL:1000494!2.87e-13!12;CL:1000449!8.59e-10!16;CL:0000066!1.87e-08!254;CL:0000239!4.57e-07!3;CL:1000615!4.57e-07!3;CL:0002306!4.57e-07!3;CL:0000223!5.13e-07!59;CL:0002076!5.68e-07!43;CL:0002231!5.99e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.09e-20;10!UBERON:0007687;1.09e-20;10!UBERON:0007297;3.24e-12;2!UBERON:0003104;2.47e-07;31 | |||
|ontology_enrichment_disease=DOID:4468!8.28e-11!2;DOID:305!1.87e-08!106;DOID:299!4.92e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;7.82e-45;2!DOID:3910;3.24e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,7.83e-45,2;DOID:3910,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!6.65e-19!27;UBERON:0003918!6.65e-19!27;UBERON:0005095!6.65e-19!27;UBERON:0007687!6.65e-19!27;UBERON:0006554!1.66e-17!44;UBERON:0001008!4.79e-17!45;UBERON:0000058!7.56e-16!26;UBERON:0000489!1.37e-15!32;UBERON:0009773!2.87e-13!12;UBERON:0001231!2.87e-13!12;UBERON:0004810!2.87e-13!12;UBERON:0006555!1.92e-12!17;UBERON:0005103!1.92e-12!17;UBERON:0000083!1.92e-12!17;UBERON:0009201!1.92e-12!17;UBERON:0004819!1.92e-12!17;UBERON:0006553!1.92e-12!17;UBERON:0003074!1.92e-12!17;UBERON:0003060!1.92e-12!17;UBERON:0000080!1.07e-11!18;UBERON:0002120!1.07e-11!18;UBERON:0004875!1.07e-11!18;UBERON:0005721!1.07e-11!18;UBERON:0005754!1.07e-11!18;UBERON:0007297!1.07e-11!18;UBERON:0005172!1.60e-11!55;UBERON:0005173!1.60e-11!55;UBERON:0004876!1.98e-10!20;UBERON:0003064!2.17e-10!37;UBERON:0002417!4.08e-10!61;UBERON:0000916!4.08e-10!61;UBERON:0003887!6.91e-10!21;UBERON:0004211!8.59e-10!16;UBERON:0001285!8.59e-10!16;UBERON:0007684!8.59e-10!16;UBERON:0003220!8.59e-10!16;UBERON:0004208!8.59e-10!16;UBERON:0005177!1.66e-08!107;UBERON:0003886!7.66e-08!63;UBERON:0006853!4.57e-07!3;UBERON:0007685!4.57e-07!3;UBERON:0004134!4.57e-07!3;UBERON:0002553!7.95e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.13e-23;1!UBERON:0004903;3.24e-12;2!UBERON:0002173;3.24e-12;2!UBERON:0002186;3.24e-12;2!UBERON:0000058;1.10e-09;10!UBERON:0002113;5.07e-09;24!UBERON:0011143;5.07e-09;24!UBERON:0004821;1.40e-08;3!UBERON:0007499;1.40e-08;3!UBERON:0003215;1.40e-08;3!UBERON:0010368;1.40e-08;3!UBERON:0009911;1.40e-08;3!UBERON:0002299;1.40e-08;3!UBERON:0006947;1.40e-08;3!UBERON:0006524;1.40e-08;3!UBERON:0008874;1.40e-08;3!UBERON:0002169;1.40e-08;3!UBERON:0004894;1.40e-08;3!UBERON:0004054;1.40e-08;3!UBERON:0000489;1.44e-07;29!UBERON:0006554;2.47e-07;30!UBERON:0001008;2.47e-07;30!UBERON:0005904;9.63e-07;4!UBERON:0009856;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.13e-23,1;UBERON:0002113,4.81e-14,26;UBERON:0003918,4.81e-14,26;UBERON:0011143,4.81e-14,26;UBERON:0005095,4.81e-14,26;UBERON:0007687,4.81e-14,26;UBERON:0004903,2.90e-12,2;UBERON:0002173,2.90e-12,2;UBERON:0002186,2.90e-12,2;UBERON:0000489,7.57e-12,31;UBERON:0004821,1.30e-08,3;UBERON:0003215,1.30e-08,3;UBERON:0010368,1.30e-08,3;UBERON:0009911,1.30e-08,3;UBERON:0002299,1.30e-08,3;UBERON:0006524,1.30e-08,3;UBERON:0008874,1.30e-08,3;UBERON:0002169,1.30e-08,3;UBERON:0004894,1.30e-08,3;UBERON:0006947,1.40e-08,3;UBERON:0004054,1.40e-08,3;UBERON:0006554,6.16e-08,47;UBERON:0001008,8.88e-08,48;UBERON:0005172,6.01e-07,54;UBERON:0005173,6.01e-07,54;UBERON:0005904,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.73886140225013,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,9.63073568138972,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8996618021789,3.77673034571986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58738126023125,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,14.251221020429,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p14@OXR1 | |||
}} |
Revision as of 23:20, 22 January 2014
Short description: | p14@OXR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_OXR1_5end |
Coexpression cluster: | C2387_kidney_renal_serous_smallcell_clear_mesothelioma_HES3GFP |
Association with transcript: | 14bp_to_ENST00000521963_5end |
EntrezGene: | OXR1 |
HGNC: | 15822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 5.13e-23 | 1 |
kidney | 4.81e-14 | 26 |
kidney mesenchyme | 4.81e-14 | 26 |
upper urinary tract | 4.81e-14 | 26 |
kidney rudiment | 4.81e-14 | 26 |
kidney field | 4.81e-14 | 26 |
bronchoalveolar duct junction | 2.90e-12 | 2 |
alveolar duct | 2.90e-12 | 2 |
bronchiole | 2.90e-12 | 2 |
cavitated compound organ | 7.57e-12 | 31 |
pulmonary alveolus epithelium | 1.30e-08 | 3 |
alveolus | 1.30e-08 | 3 |
pulmonary lobule | 1.30e-08 | 3 |
lobule | 1.30e-08 | 3 |
alveolus of lung | 1.30e-08 | 3 |
alveolar system | 1.30e-08 | 3 |
pulmonary acinus | 1.30e-08 | 3 |
alveolar sac | 1.30e-08 | 3 |
alveolar wall | 1.30e-08 | 3 |
male genital duct | 1.40e-08 | 3 |
internal male genitalia | 1.40e-08 | 3 |
urinary system structure | 6.16e-08 | 47 |
renal system | 8.88e-08 | 48 |
abdomen element | 6.01e-07 | 54 |
abdominal segment element | 6.01e-07 | 54 |
duct of male reproductive system | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.83e-45 | 2 |
lung adenocarcinoma | 2.90e-12 | 2 |