FFCP PHASE1:Hg19::chr8:55370884..55370896,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18122 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=187bp_to_BC140307_5end | |||
|description=CAGE_peak_5_at_SOX17_5end | |||
|id=chr8:55370884..55370896,+ | |||
|ontology_enrichment_celltype=CL:0000359!2.63e-18!32;CL:0000222!3.06e-13!119;CL:0002139!8.09e-13!24;CL:0000192!9.98e-13!42;CL:0000514!9.98e-13!42;CL:0000115!1.17e-10!35;CL:0002539!1.65e-10!10;CL:0002078!6.42e-09!44;CL:0000187!7.85e-09!54;CL:0000071!9.61e-09!18;CL:0002546!9.61e-09!18;CL:0000183!1.16e-08!59;CL:0000680!3.98e-08!57;CL:0000056!3.98e-08!57;CL:0000355!3.98e-08!57;CL:0002595!9.79e-08!5;CL:0000393!1.70e-07!60;CL:0000211!1.70e-07!60;CL:0000213!5.35e-07!57;CL:0000215!5.35e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.30e-14;24!CL:0000359;7.44e-14;32!CL:0002144;7.65e-14;3!CL:0000071;3.64e-13;18!CL:0002591;4.35e-11;1!CL:0000511;9.96e-11;1!CL:0002625;9.96e-11;1!CL:0000216;9.96e-11;1!CL:0000313;9.96e-11;1!CL:0000115;1.38e-10;36!CL:0002539;2.57e-09;10!CL:0002595;1.25e-08;5!CL:0002078;5.89e-08;45!CL:0000192;1.66e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.13e-15,121;CL:0000359,4.87e-14,32;CL:0002144,6.12e-14,3;CL:0002139,6.51e-14,24;CL:0000071,2.97e-13,18;CL:0002546,2.97e-13,18;CL:0000115,2.57e-12,36;CL:0002591,5.05e-11,1;CL:0000511,8.22e-11,1;CL:0002625,8.22e-11,1;CL:0000216,8.22e-11,1;CL:0000313,1.77e-10,1;CL:0000192,2.89e-10,43;CL:0000514,2.89e-10,43;CL:0002078,1.04e-09,45;CL:0000213,1.48e-09,58;CL:0000215,1.48e-09,58;CL:0002539,2.23e-09,10;CL:0002595,1.43e-08,5;CL:0002321,2.63e-08,250;CL:0000187,7.26e-08,55;CL:0000680,2.03e-07,58;CL:0000056,2.03e-07,58;CL:0000355,2.03e-07,58;CL:0000393,5.11e-07,61;CL:0000211,5.11e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;3.64e-13;18!CL:0000514;1.66e-07;43 | |||
|ontology_enrichment_disease=DOID:120!1.33e-07!27;DOID:193!6.56e-07!29;DOID:2394!6.65e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.96e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.59e-35!84;UBERON:0001637!3.06e-34!42;UBERON:0003509!3.06e-34!42;UBERON:0004572!3.06e-34!42;UBERON:0000055!6.66e-34!69;UBERON:0001981!1.68e-31!60;UBERON:0007500!1.68e-31!60;UBERON:0004537!1.68e-31!60;UBERON:0006965!1.68e-31!60;UBERON:0002049!3.56e-28!79;UBERON:0007798!3.56e-28!79;UBERON:0004573!1.89e-24!33;UBERON:0004571!1.89e-24!33;UBERON:0001009!3.65e-24!113;UBERON:0003914!5.29e-24!118;UBERON:0004535!1.04e-23!110;UBERON:0000947!3.90e-15!21;UBERON:0010191!3.90e-15!21;UBERON:0000025!1.16e-12!194;UBERON:0000477!2.21e-12!286;UBERON:0004111!2.39e-12!241;UBERON:0000991!4.79e-12!21;UBERON:0009196!4.79e-12!21;UBERON:0009117!4.79e-12!21;UBERON:0005564!4.79e-12!21;UBERON:0004176!2.30e-11!22;UBERON:0000490!1.28e-10!138;UBERON:0004237!1.65e-10!10;UBERON:0004695!1.65e-10!10;UBERON:0002111!1.65e-10!10;UBERON:0004178!1.65e-10!10;UBERON:0003081!2.43e-10!216;UBERON:0003133!9.08e-10!48;UBERON:0000992!1.48e-09!13;UBERON:0003886!4.01e-09!63;UBERON:0000926!6.77e-09!448;UBERON:0004120!6.77e-09!448;UBERON:0006603!6.77e-09!448;UBERON:0002323!8.43e-09!46;UBERON:0001986!9.61e-09!18;UBERON:0004638!9.61e-09!18;UBERON:0004852!9.61e-09!18;UBERON:0000483!9.73e-09!309;UBERON:0000487!1.60e-08!22;UBERON:0000119!1.60e-08!312;UBERON:0001134!2.46e-08!61;UBERON:0002036!2.46e-08!61;UBERON:0003082!2.46e-08!61;UBERON:0003100!3.40e-08!41;UBERON:0003134!3.97e-08!37;UBERON:0000474!3.97e-08!37;UBERON:0004458!5.18e-08!49;UBERON:0005156!5.20e-08!59;UBERON:0000990!5.20e-08!59;UBERON:0002385!6.41e-08!63;UBERON:0001015!6.41e-08!63;UBERON:0000383!6.41e-08!63;UBERON:0003834!9.79e-08!5;UBERON:0001533!9.79e-08!5;UBERON:0002553!1.06e-07!70;UBERON:0002118!1.66e-07!5;UBERON:0004532!1.66e-07!5;UBERON:0006914!3.14e-07!25;UBERON:0000468!4.36e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004909;1.05e-19;2!UBERON:0000487;3.70e-15;22!UBERON:0010523;7.65e-14;3!UBERON:0001915;7.65e-14;3!UBERON:0001982;7.65e-14;3!UBERON:0006914;2.71e-13;25!UBERON:0004638;3.64e-13;18!UBERON:0001986;3.64e-13;18!UBERON:0004852;3.64e-13;18!UBERON:0007500;4.44e-13;56!UBERON:0001981;4.44e-13;56!UBERON:0004537;4.44e-13;56!UBERON:0004573;8.21e-13;33!UBERON:0004571;8.21e-13;33!UBERON:0001637;1.11e-11;42!UBERON:0003509;1.11e-11;42!UBERON:0004572;1.11e-11;42!UBERON:0000055;2.62e-11;65!UBERON:0001136;9.96e-11;1!UBERON:0001343;9.96e-11;1!UBERON:0004911;9.96e-11;1!UBERON:0004910;9.96e-11;1!UBERON:0004813;9.96e-11;1!UBERON:0003914;1.53e-10;74!UBERON:0000490;4.75e-10;33!UBERON:0004237;2.57e-09;10!UBERON:0004695;2.57e-09;10!UBERON:0002111;2.57e-09;10!UBERON:0004178;2.57e-09;10!UBERON:0002049;2.76e-09;75!UBERON:0007798;2.76e-09;75!UBERON:0003834;1.25e-08;5!UBERON:0001533;1.25e-08;5!UBERON:0000947;1.32e-07;21!UBERON:0010191;1.32e-07;21!UBERON:0000025;8.88e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.06e-21,68;UBERON:0007500,1.56e-21,59;UBERON:0001981,1.56e-21,59;UBERON:0004537,1.56e-21,59;UBERON:0006965,1.56e-21,59;UBERON:0004909,1.55e-19,2;UBERON:0002049,1.17e-18,78;UBERON:0007798,1.17e-18,78;UBERON:0004872,1.92e-17,83;UBERON:0001637,2.59e-17,42;UBERON:0003509,2.59e-17,42;UBERON:0004572,2.59e-17,42;UBERON:0000487,2.87e-15,22;UBERON:0010523,6.12e-14,3;UBERON:0001915,6.12e-14,3;UBERON:0001982,6.12e-14,3;UBERON:0003914,8.27e-14,117;UBERON:0004573,1.31e-13,33;UBERON:0004571,1.31e-13,33;UBERON:0006914,2.18e-13,25;UBERON:0004638,2.97e-13,18;UBERON:0001986,2.97e-13,18;UBERON:0004852,2.97e-13,18;UBERON:0004535,9.21e-13,109;UBERON:0001009,2.30e-12,112;UBERON:0001136,8.22e-11,1;UBERON:0001343,8.22e-11,1;UBERON:0004910,8.22e-11,1;UBERON:0005154,8.22e-11,1;UBERON:0005295,8.22e-11,1;UBERON:0004813,8.22e-11,1;UBERON:0005297,8.22e-11,1;UBERON:0005294,8.22e-11,1;UBERON:0010141,8.22e-11,1;UBERON:0005891,8.22e-11,1;UBERON:0004911,1.77e-10,1;UBERON:0004237,2.23e-09,10;UBERON:0004695,2.23e-09,10;UBERON:0002111,2.23e-09,10;UBERON:0004178,2.23e-09,10;UBERON:0000490,7.37e-09,148;UBERON:0003834,1.43e-08,5;UBERON:0001533,1.43e-08,5;UBERON:0000947,1.20e-07,21;UBERON:0010191,1.20e-07,21;UBERON:0004111,1.40e-07,240;UBERON:0000025,1.83e-07,192;UBERON:0003081,6.06e-07,203;UBERON:0007503,6.46e-07,78;UBERON:0001134,6.81e-07,62;UBERON:0002036,6.81e-07,62;UBERON:0003082,6.81e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,3.01347264011988,0.730310090387373,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,1.6507082516404,0.417989933073621,0.258416759169329,0,0,1.61131726843659,0,4.88124115096339,0.367663080345869,2.43042584364528,0.267899184852239,0,0,1.53316637465883,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0,0.942974704487816,0.817309515567294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,1.38895653772983,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,2.27466768141793,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0,0,0,0.842516912477962,0,0.487426979262569,3.16950440270266,0,0,2.26016233240486,0,1.32687795048244,0.438450885253763,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,2.77695581336209,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.318593534327405,0,0.465788870628778,0,0,0,0,0,0.813741466409323,0.545545977607678,0.322231671127465,0,1.19428766609585,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,1.11855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.303114792872958,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.488965776731466,0,0,0.201273793591026,0 | |||
|short_description=p5@SOX17 | |||
}} |
Revision as of 22:04, 22 January 2014
Short description: | p5@SOX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOX17_5end |
Coexpression cluster: | NA |
Association with transcript: | 187bp_to_BC140307_5end |
EntrezGene: | SOX17 |
HGNC: | 18122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.13e-15 | 121 |
vascular associated smooth muscle cell | 4.87e-14 | 32 |
capillary endothelial cell | 6.12e-14 | 3 |
endothelial cell of vascular tree | 6.51e-14 | 24 |
blood vessel endothelial cell | 2.97e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.97e-13 | 18 |
endothelial cell | 2.57e-12 | 36 |
smooth muscle cell of the pulmonary artery | 5.05e-11 | 1 |
androgen binding protein secreting cell | 8.22e-11 | 1 |
seminiferous tubule epithelial cell | 8.22e-11 | 1 |
Sertoli cell | 8.22e-11 | 1 |
serous secreting cell | 1.77e-10 | 1 |
smooth muscle cell | 2.89e-10 | 43 |
smooth muscle myoblast | 2.89e-10 | 43 |
meso-epithelial cell | 1.04e-09 | 45 |
lining cell | 1.48e-09 | 58 |
barrier cell | 1.48e-09 | 58 |
aortic smooth muscle cell | 2.23e-09 | 10 |
smooth muscle cell of the subclavian artery | 1.43e-08 | 5 |
embryonic cell | 2.63e-08 | 250 |
muscle cell | 7.26e-08 | 55 |
muscle precursor cell | 2.03e-07 | 58 |
myoblast | 2.03e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-07 | 58 |
electrically responsive cell | 5.11e-07 | 61 |
electrically active cell | 5.11e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.77e-10 | 1 |