FFCP PHASE1:Hg19::chr8:48173490..48173504,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28971 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJJ2 | |||
|association_with_transcript=0bp_to_ENST00000523814_5end | |||
|description=CAGE_peak_2_at_KIAA0146_5end | |||
|id=chr8:48173490..48173504,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.96e-08;82 | |||
|ontology_enrichment_disease=DOID:162!7.12e-21!235;DOID:14566!8.07e-20!239;DOID:0050687!1.22e-14!143;DOID:0050686!2.45e-13!137;DOID:305!3.82e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.55e-21,235;DOID:14566,8.30e-20,239;DOID:0050687,1.72e-14,143;DOID:0050686,3.75e-13,137;DOID:305,7.56e-12,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.98e-15!94;UBERON:0001016!1.98e-15!94;UBERON:0001017!1.05e-14!82;UBERON:0001049!6.03e-14!57;UBERON:0005068!6.03e-14!57;UBERON:0006241!6.03e-14!57;UBERON:0007135!6.03e-14!57;UBERON:0005743!1.35e-13!86;UBERON:0000955!1.71e-13!69;UBERON:0006238!1.71e-13!69;UBERON:0000924!2.41e-12!173;UBERON:0006601!2.41e-12!173;UBERON:0004121!3.04e-12!169;UBERON:0002616!1.05e-11!59;UBERON:0002780!4.30e-11!41;UBERON:0001890!4.30e-11!41;UBERON:0006240!4.30e-11!41;UBERON:0001893!5.49e-11!34;UBERON:0002791!1.28e-10!33;UBERON:0002020!1.59e-10!34;UBERON:0003528!1.59e-10!34;UBERON:0003075!2.17e-10!86;UBERON:0007284!2.17e-10!86;UBERON:0002346!2.19e-10!90;UBERON:0001869!2.23e-10!32;UBERON:0003080!3.36e-10!42;UBERON:0000956!2.46e-09!25;UBERON:0000203!2.46e-09!25;UBERON:0002619!1.84e-08!22;UBERON:0000153!2.08e-08!129;UBERON:0007811!2.08e-08!129;UBERON:0000033!9.02e-08!123;UBERON:0001950!9.12e-08!20;UBERON:0007023!9.67e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.38e-10;34!UBERON:0001869;1.06e-09;32!UBERON:0000956;1.18e-09;25!UBERON:0000203;1.18e-09;25!UBERON:0002791;1.30e-09;32!UBERON:0003528;2.46e-09;34!UBERON:0002020;2.46e-09;34!UBERON:0002780;3.83e-09;41!UBERON:0001890;3.83e-09;41!UBERON:0000073;5.13e-09;53!UBERON:0002616;5.13e-09;53!UBERON:0002619;1.41e-08;22!UBERON:0001950;8.64e-08;20!UBERON:0001016;1.15e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.96e-17,89;UBERON:0001049,1.37e-15,56;UBERON:0005068,1.37e-15,56;UBERON:0006241,1.37e-15,56;UBERON:0007135,1.37e-15,56;UBERON:0001017,2.72e-15,81;UBERON:0000955,1.87e-14,68;UBERON:0006238,1.87e-14,68;UBERON:0000073,2.46e-14,53;UBERON:0002616,2.46e-14,53;UBERON:0002780,1.18e-11,41;UBERON:0001890,1.18e-11,41;UBERON:0003080,1.18e-11,41;UBERON:0006240,1.18e-11,41;UBERON:0001893,2.75e-11,34;UBERON:0004121,4.52e-11,171;UBERON:0000924,4.52e-11,171;UBERON:0006601,4.52e-11,171;UBERON:0003528,8.38e-11,34;UBERON:0002020,8.38e-11,34;UBERON:0001869,1.21e-10,32;UBERON:0002791,1.59e-10,32;UBERON:0002346,3.68e-10,86;UBERON:0003075,3.69e-10,82;UBERON:0007284,3.69e-10,82;UBERON:0011216,4.56e-10,223;UBERON:0000956,1.57e-09,25;UBERON:0000203,1.57e-09,25;UBERON:0002619,1.32e-08,22;UBERON:0010371,4.04e-08,104;UBERON:0001950,7.15e-08,20;UBERON:0003056,1.63e-07,61;UBERON:0007023,9.10e-07,114 | |||
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| |||
|short_description=p2@KIAA0146 | |||
}} |
Revision as of 21:56, 22 January 2014
Short description: | p2@KIAA0146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIAA0146_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000523814_5end |
EntrezGene: | KIAA0146 |
HGNC: | 28971 |
UniProt: | E5RJJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 4.96e-17 | 89 |
neural tube | 1.37e-15 | 56 |
neural rod | 1.37e-15 | 56 |
future spinal cord | 1.37e-15 | 56 |
neural keel | 1.37e-15 | 56 |
central nervous system | 2.72e-15 | 81 |
brain | 1.87e-14 | 68 |
future brain | 1.87e-14 | 68 |
regional part of nervous system | 2.46e-14 | 53 |
regional part of brain | 2.46e-14 | 53 |
regional part of forebrain | 1.18e-11 | 41 |
forebrain | 1.18e-11 | 41 |
anterior neural tube | 1.18e-11 | 41 |
future forebrain | 1.18e-11 | 41 |
telencephalon | 2.75e-11 | 34 |
ectoderm-derived structure | 4.52e-11 | 171 |
ectoderm | 4.52e-11 | 171 |
presumptive ectoderm | 4.52e-11 | 171 |
brain grey matter | 8.38e-11 | 34 |
gray matter | 8.38e-11 | 34 |
cerebral hemisphere | 1.21e-10 | 32 |
regional part of telencephalon | 1.59e-10 | 32 |
neurectoderm | 3.68e-10 | 86 |
neural plate | 3.69e-10 | 82 |
presumptive neural plate | 3.69e-10 | 82 |
organ system subdivision | 4.56e-10 | 223 |
cerebral cortex | 1.57e-09 | 25 |
pallium | 1.57e-09 | 25 |
regional part of cerebral cortex | 1.32e-08 | 22 |
ecto-epithelium | 4.04e-08 | 104 |
neocortex | 7.15e-08 | 20 |
pre-chordal neural plate | 1.63e-07 | 61 |
adult organism | 9.10e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.55e-21 | 235 |
disease of cellular proliferation | 8.30e-20 | 239 |
cell type cancer | 1.72e-14 | 143 |
organ system cancer | 3.75e-13 | 137 |
carcinoma | 7.56e-12 | 106 |