FFCP PHASE1:Hg19::chr8:11534438..11534451,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2626 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4173 | |||
|TSSclassifier=strong | |||
|UniProt=B3KUF4 | |||
|association_with_transcript=-16bp_to_ENST00000528712,uc003wub.1,uc011kxb.1_5end | |||
|description=CAGE_peak_3_at_GATA4_5end | |||
|id=chr8:11534438..11534451,+ | |||
|ontology_enrichment_celltype=CL:0002494!3.97e-22!16;CL:0002548!1.67e-13!6;CL:0000632!9.19e-08!2;CL:0000569!1.53e-07!4;CL:0000011!1.53e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000511;4.52e-09;1!CL:0002625;4.52e-09;1!CL:0000216;4.52e-09;1!CL:0002174;6.90e-09;1!CL:0000501;6.90e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.19e-09,1;CL:0002625,4.19e-09,1;CL:0000216,4.19e-09,1;CL:0002174,6.65e-09,1;CL:0000501,6.65e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.52e-09;1!UBERON:0010227;1.37e-08;1!UBERON:0005062;3.46e-08;4!UBERON:0007284;3.46e-08;4!UBERON:0009117;2.14e-07;10!UBERON:0005564;2.14e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.80e-43!27;UBERON:0000948!1.75e-39!24;UBERON:0005498!1.75e-39!24;UBERON:0004140!1.75e-39!24;UBERON:0009881!1.75e-39!24;UBERON:0004141!1.75e-39!24;UBERON:0003084!1.75e-39!24;UBERON:0007005!1.75e-39!24;UBERON:0004139!1.75e-39!24;UBERON:0004291!1.75e-39!24;UBERON:0003103!5.18e-17!69;UBERON:0001048!8.00e-15!168;UBERON:0004872!4.75e-13!84;UBERON:0003914!5.39e-12!118;UBERON:0004151!9.98e-11!3;UBERON:0003978!1.07e-10!3;UBERON:0009751!1.07e-10!3;UBERON:0000946!1.07e-10!3;UBERON:0002523!1.07e-10!3;UBERON:0005983!1.07e-10!3;UBERON:0002165!1.07e-10!3;UBERON:0002062!1.07e-10!3;UBERON:0007280!1.07e-10!3;UBERON:0000991!8.62e-09!21;UBERON:0009196!8.62e-09!21;UBERON:0009117!8.62e-09!21;UBERON:0005564!8.62e-09!21;UBERON:0001009!2.11e-08!113;UBERON:0004176!2.49e-08!22;UBERON:0002081!7.77e-08!2;UBERON:0002133!8.88e-08!2;UBERON:0002107!1.25e-07!19;UBERON:0006925!1.25e-07!19;UBERON:0008836!1.25e-07!19;UBERON:0004535!7.50e-07!110;UBERON:0005057!9.52e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.68e-22;25!UBERON:0000948;1.76e-15;22!UBERON:0002081;1.79e-15;2!UBERON:0002133;1.79e-15;2!UBERON:0002108;1.32e-14;4!UBERON:0003978;1.26e-10;3!UBERON:0004151;1.26e-10;3!UBERON:0000946;1.26e-10;3!UBERON:0000473;4.20e-09;8!UBERON:0001136;4.52e-09;1!UBERON:0001343;4.52e-09;1!UBERON:0004910;4.52e-09;1!UBERON:0004813;4.52e-09;1!UBERON:0002079;1.37e-08;1!UBERON:0002135;1.37e-08;1!UBERON:0002134;1.37e-08;1!UBERON:0002426;1.37e-08;1!UBERON:0003831;1.37e-08;1!UBERON:0003898;1.37e-08;1!UBERON:0004830;1.37e-08;1!UBERON:0005208;1.37e-08;1!UBERON:0003830;1.37e-08;1!UBERON:0005175;1.37e-08;1!UBERON:0001774;1.37e-08;1!UBERON:0004145;1.37e-08;1!UBERON:0005946;1.37e-08;1!UBERON:0001103;1.37e-08;1!UBERON:0005965;1.37e-08;1!UBERON:0002078;1.37e-08;1!UBERON:0005409;3.60e-08;22!UBERON:0000160;4.44e-07;17!UBERON:0000922;7.82e-07;49!UBERON:0003135;9.70e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.44e-20,27;UBERON:0002081,2.08e-15,2;UBERON:0010227,2.08e-15,2;UBERON:0002133,2.79e-15,2;UBERON:0002108,1.30e-14,4;UBERON:0000948,3.51e-14,24;UBERON:0005498,3.51e-14,24;UBERON:0004140,3.51e-14,24;UBERON:0009881,3.51e-14,24;UBERON:0004141,3.51e-14,24;UBERON:0003084,3.51e-14,24;UBERON:0007005,3.51e-14,24;UBERON:0004139,3.51e-14,24;UBERON:0004291,3.51e-14,24;UBERON:0004151,1.39e-10,3;UBERON:0003978,1.69e-10,3;UBERON:0009751,1.69e-10,3;UBERON:0000946,1.69e-10,3;UBERON:0002523,1.69e-10,3;UBERON:0005983,1.69e-10,3;UBERON:0002165,1.69e-10,3;UBERON:0002062,1.69e-10,3;UBERON:0007280,1.69e-10,3;UBERON:0000473,3.98e-09,8;UBERON:0001136,4.19e-09,1;UBERON:0001343,4.19e-09,1;UBERON:0004910,4.19e-09,1;UBERON:0005154,4.19e-09,1;UBERON:0005295,4.19e-09,1;UBERON:0004813,4.19e-09,1;UBERON:0005297,4.19e-09,1;UBERON:0005294,4.19e-09,1;UBERON:0010141,4.19e-09,1;UBERON:0005891,4.19e-09,1;UBERON:0002426,1.05e-08,1;UBERON:0003831,1.05e-08,1;UBERON:0003898,1.05e-08,1;UBERON:0004830,1.05e-08,1;UBERON:0003830,1.05e-08,1;UBERON:0005175,1.05e-08,1;UBERON:0001774,1.05e-08,1;UBERON:0001103,1.05e-08,1;UBERON:0010084,1.05e-08,1;UBERON:0002134,1.42e-08,1;UBERON:0005208,1.42e-08,1;UBERON:0005946,1.42e-08,1;UBERON:0005965,1.42e-08,1;UBERON:0002078,1.42e-08,1;UBERON:0002079,1.53e-08,1;UBERON:0002135,2.06e-08,1;UBERON:0001048,1.50e-07,160;UBERON:0003103,2.32e-07,68;UBERON:0005409,3.30e-07,25;UBERON:0000160,4.37e-07,17;UBERON:0003135,9.33e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.79007586580942,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68203280042692,0,0.24666754841716,1.55605517699883,0.404132016209064,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36894464424042,0,0,0,0,0,1.60515529459758,0,0,0,0,0,3.62972148145992,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57859264851974,0,1.11712960508902,0.687481272035051,1.43574604915363,0,2.57535628881943,1.33902874465124,4.23255876666375,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.604923695052956,0.466311601748341,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,4.08988022054707,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01682626794058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.190252925652,9.17950154116621,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,3.7031878836078,0,0,0,0,0,1.0135880080915,0,0,0,0,2.57647573942014,2.67964130156179,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GATA4 | |||
}} |
Revision as of 20:41, 22 January 2014
Short description: | p3@GATA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GATA4_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000528712, uc003wub.1, uc011kxb.1_5end |
EntrezGene: | GATA4 |
HGNC: | 4173 |
UniProt: | B3KUF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.19e-09 | 1 |
seminiferous tubule epithelial cell | 4.19e-09 | 1 |
Sertoli cell | 4.19e-09 | 1 |
follicular cell of ovary | 6.65e-09 | 1 |
granulosa cell | 6.65e-09 | 1 |