FFCP PHASE1:Hg19::chr8:10192316..10192321,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_at_chr8:10192316..10192321,- | |||
|id=chr8:10192316..10192321,- | |||
|ontology_enrichment_celltype=CL:0000540!9.81e-10!6;CL:0000031!9.81e-10!6;CL:0000404!9.81e-10!6;CL:0000047!2.72e-07!8;CL:0002322!8.23e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.51e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.85e-36!34;UBERON:0003528!1.85e-36!34;UBERON:0001049!3.32e-35!57;UBERON:0005068!3.32e-35!57;UBERON:0006241!3.32e-35!57;UBERON:0007135!3.32e-35!57;UBERON:0002791!5.24e-34!33;UBERON:0002616!8.59e-34!59;UBERON:0000073!1.08e-33!94;UBERON:0001016!1.08e-33!94;UBERON:0002619!1.72e-33!22;UBERON:0000956!5.26e-33!25;UBERON:0000203!5.26e-33!25;UBERON:0001893!6.93e-33!34;UBERON:0001950!2.71e-32!20;UBERON:0005743!3.35e-31!86;UBERON:0001017!9.98e-31!82;UBERON:0002780!2.33e-29!41;UBERON:0001890!2.33e-29!41;UBERON:0006240!2.33e-29!41;UBERON:0003080!1.51e-28!42;UBERON:0001869!3.93e-28!32;UBERON:0000955!1.88e-27!69;UBERON:0006238!1.88e-27!69;UBERON:0002346!1.55e-23!90;UBERON:0003075!5.08e-23!86;UBERON:0007284!5.08e-23!86;UBERON:0003056!3.28e-20!61;UBERON:0000924!6.43e-17!173;UBERON:0006601!6.43e-17!173;UBERON:0004121!2.60e-16!169;UBERON:0001871!1.17e-14!7;UBERON:0000153!4.07e-14!129;UBERON:0007811!4.07e-14!129;UBERON:0000033!7.25e-14!123;UBERON:0002021!2.55e-11!5;UBERON:0002771!1.19e-10!3;UBERON:0006331!1.50e-10!3;UBERON:0004733!4.68e-10!12;UBERON:0002028!4.68e-10!12;UBERON:0007277!4.68e-10!12;UBERON:0002680!1.04e-09!9;UBERON:0001895!1.04e-09!9;UBERON:0010092!1.04e-09!9;UBERON:0007023!1.77e-09!115;UBERON:0004732!3.17e-09!13;UBERON:0000200!5.42e-09!6;UBERON:0000025!5.53e-08!194;UBERON:0003076!6.76e-08!15;UBERON:0003057!6.76e-08!15;UBERON:0002148!1.22e-07!2;UBERON:0009662!1.22e-07!2;UBERON:0002298!7.85e-07!8;UBERON:0001872!9.84e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.54e-27;6!UBERON:0002680;1.29e-18;9!UBERON:0001895;1.29e-18;9!UBERON:0002114;1.31e-14;2!UBERON:0004733;3.04e-14;12!UBERON:0002028;3.04e-14;12!UBERON:0004732;3.12e-13;13!UBERON:0002108;2.63e-09;4!UBERON:0001872;3.22e-09;5!UBERON:0000922;3.36e-09;49!UBERON:0000073;4.34e-09;53!UBERON:0002616;4.34e-09;53!UBERON:0001950;1.53e-08;20!UBERON:0002619;6.98e-08;22!UBERON:0001016;1.11e-07;83!UBERON:0000956;4.41e-07;25!UBERON:0000203;4.41e-07;25!UBERON:0001017;4.81e-07;75!UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.38e-27,6;UBERON:0006215,2.38e-27,6;UBERON:0002680,1.24e-18,9;UBERON:0001895,1.24e-18,9;UBERON:0010092,1.24e-18,9;UBERON:0002114,1.40e-14,2;UBERON:0004733,2.94e-14,12;UBERON:0002028,2.94e-14,12;UBERON:0007277,2.94e-14,12;UBERON:0004732,3.03e-13,13;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0003076,1.27e-11,15;UBERON:0003057,1.27e-11,15;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0002108,2.74e-09,4;UBERON:0001872,3.49e-09,5;UBERON:0001950,1.53e-08,20;UBERON:0001017,2.69e-08,81;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0002346,6.09e-08,86;UBERON:0002619,6.98e-08,22;UBERON:0001016,1.53e-07,89;UBERON:0000956,4.41e-07,25;UBERON:0000203,4.41e-07,25;UBERON:0001871,5.70e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,1.52581736317083,2.76448149828062,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.202203398942031,0,0,0,0,0,0,0,1.53036380815245,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.272406812223151,0.482259445395058,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.221858103073705,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.615349092722265,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:10192316..10192321,- | |||
}} |
Revision as of 20:38, 22 January 2014
Short description: | p@chr8:10192316..10192321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:10192316..10192321, - |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.38e-27 | 6 |
rhombic lip | 2.38e-27 | 6 |
regional part of metencephalon | 1.24e-18 | 9 |
metencephalon | 1.24e-18 | 9 |
future metencephalon | 1.24e-18 | 9 |
duodenum | 1.40e-14 | 2 |
segmental subdivision of hindbrain | 2.94e-14 | 12 |
hindbrain | 2.94e-14 | 12 |
presumptive hindbrain | 2.94e-14 | 12 |
segmental subdivision of nervous system | 3.03e-13 | 13 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
posterior neural tube | 1.27e-11 | 15 |
chordal neural plate | 1.27e-11 | 15 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
small intestine | 2.74e-09 | 4 |
parietal lobe | 3.49e-09 | 5 |
neocortex | 1.53e-08 | 20 |
central nervous system | 2.69e-08 | 81 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
neurectoderm | 6.09e-08 | 86 |
regional part of cerebral cortex | 6.98e-08 | 22 |
nervous system | 1.53e-07 | 89 |
cerebral cortex | 4.41e-07 | 25 |
pallium | 4.41e-07 | 25 |
temporal lobe | 5.70e-07 | 6 |