FFCP PHASE1:Hg19::chr7:107883678..107883689,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |||
|TSSclassifier=strong | |||
|UniProt=C9JH43 | |||
|association_with_transcript=0bp_to_ENST00000417701_5end | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_13_at_NRCAM_5end | |||
|id=chr7:107883678..107883689,- | |||
|ontology_enrichment_celltype=CL:0000064!4.72e-12!3;CL:0005012!4.72e-12!3;CL:0000067!4.72e-12!3;CL:0002304!4.72e-12!3;CL:0000306!1.26e-09!4;CL:0002222!1.26e-09!4;CL:0002224!1.26e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.16e-29;4!CL:0002222;3.16e-29;4!CL:0002224;3.16e-29;4!CL:0000064;9.90e-11;3!CL:0000067;9.90e-11;3!CL:0005012;9.90e-11;3!CL:0002304;9.90e-11;3!CL:0000075;3.69e-10;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.65e-29,4;CL:0002222,3.65e-29,4;CL:0002224,3.65e-29,4;CL:0000064,1.20e-10,3;CL:0000067,1.20e-10,3;CL:0005012,1.20e-10,3;CL:0002304,1.20e-10,3;CL:0000075,4.06e-10,27 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.37e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.99e-31!86;UBERON:0007284!1.99e-31!86;UBERON:0002346!6.57e-30!90;UBERON:0002298!9.35e-26!8;UBERON:0001049!1.17e-25!57;UBERON:0005068!1.17e-25!57;UBERON:0006241!1.17e-25!57;UBERON:0007135!1.17e-25!57;UBERON:0000988!5.54e-25!3;UBERON:0002616!3.22e-21!59;UBERON:0000955!1.69e-20!69;UBERON:0006238!1.69e-20!69;UBERON:0001017!1.31e-19!82;UBERON:0003076!2.11e-19!15;UBERON:0003057!2.11e-19!15;UBERON:0005743!1.34e-18!86;UBERON:0000033!1.51e-18!123;UBERON:0001897!5.75e-18!2;UBERON:0001875!1.34e-17!2;UBERON:0006514!1.34e-17!2;UBERON:0000153!1.48e-17!129;UBERON:0007811!1.48e-17!129;UBERON:0003056!1.75e-17!61;UBERON:0002148!2.22e-17!2;UBERON:0009662!2.22e-17!2;UBERON:0004733!3.73e-17!12;UBERON:0002028!3.73e-17!12;UBERON:0007277!3.73e-17!12;UBERON:0000073!1.24e-16!94;UBERON:0001016!1.24e-16!94;UBERON:0004121!4.46e-16!169;UBERON:0004732!7.92e-16!13;UBERON:0000924!1.23e-15!173;UBERON:0006601!1.23e-15!173;UBERON:0002308!6.65e-15!9;UBERON:0000125!6.65e-15!9;UBERON:0007023!1.37e-13!115;UBERON:0007625!1.43e-12!11;UBERON:0001896!2.40e-12!3;UBERON:0005290!2.40e-12!3;UBERON:0010096!2.40e-12!3;UBERON:0001778!4.72e-12!3;UBERON:0001775!4.72e-12!3;UBERON:0006331!6.59e-12!3;UBERON:0002780!9.37e-12!41;UBERON:0001890!9.37e-12!41;UBERON:0006240!9.37e-12!41;UBERON:0001894!1.36e-11!7;UBERON:0006222!1.36e-11!7;UBERON:0003080!1.86e-11!42;UBERON:0001801!6.53e-10!14;UBERON:0002336!7.50e-10!1;UBERON:0001018!7.50e-10!1;UBERON:0002473!7.50e-10!1;UBERON:0005340!7.50e-10!1;UBERON:0002316!7.50e-10!1;UBERON:0003544!7.50e-10!1;UBERON:0001020!7.50e-10!1;UBERON:0005970!7.50e-10!1;UBERON:0002437!7.50e-10!1;UBERON:0002135!1.15e-09!1;UBERON:0010077!1.26e-09!4;UBERON:0005389!1.26e-09!4;UBERON:0000484!1.26e-09!4;UBERON:0002546!1.26e-09!4;UBERON:0000965!1.26e-09!4;UBERON:0001803!1.26e-09!4;UBERON:0003073!1.26e-09!4;UBERON:0005426!1.26e-09!4;UBERON:0002022!2.46e-09!1;UBERON:0000488!2.91e-09!4;UBERON:0002680!1.03e-08!9;UBERON:0001895!1.03e-08!9;UBERON:0010092!1.03e-08!9;UBERON:0000025!3.89e-08!194;UBERON:0002020!4.88e-08!34;UBERON:0003528!4.88e-08!34;UBERON:0000483!2.02e-07!309;UBERON:0000019!2.46e-07!19;UBERON:0000047!2.46e-07!19;UBERON:0004088!2.46e-07!19;UBERON:0003072!2.46e-07!19;UBERON:0003071!2.46e-07!19;UBERON:0004128!2.46e-07!19;UBERON:0000119!2.57e-07!312;UBERON:0000063!4.35e-07!97;UBERON:0000970!5.65e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;3.16e-29;4!UBERON:0005389;3.16e-29;4!UBERON:0000484;3.16e-29;4!UBERON:0000965;3.16e-29;4!UBERON:0001803;3.16e-29;4!UBERON:0007625;8.34e-24;11!UBERON:0001801;6.88e-19;14!UBERON:0001894;4.36e-17;7!UBERON:0001897;2.05e-15;2!UBERON:0010225;2.05e-15;2!UBERON:0000019;3.96e-14;19!UBERON:0000047;3.96e-14;19!UBERON:0004088;3.96e-14;19!UBERON:0010230;3.96e-14;19!UBERON:0000970;1.84e-13;20!UBERON:0002104;7.43e-13;21!UBERON:0001456;7.43e-13;21!UBERON:0000020;8.40e-12;23!UBERON:0001032;2.43e-11;24!UBERON:0004456;2.43e-11;24!UBERON:0001896;9.90e-11;3!UBERON:0001778;9.90e-11;3!UBERON:0001775;9.90e-11;3!UBERON:0005290;9.90e-11;3!UBERON:0010371;9.24e-09;31!UBERON:0000488;2.26e-08;4!UBERON:0002784;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.65e-29,4;UBERON:0005389,3.65e-29,4;UBERON:0000484,3.65e-29,4;UBERON:0002546,3.65e-29,4;UBERON:0000965,3.65e-29,4;UBERON:0001803,3.65e-29,4;UBERON:0003073,3.65e-29,4;UBERON:0005426,3.65e-29,4;UBERON:0007625,1.05e-23,11;UBERON:0001801,8.27e-19,14;UBERON:0001894,3.71e-17,7;UBERON:0006222,3.71e-17,7;UBERON:0001897,2.05e-15,2;UBERON:0010225,2.05e-15,2;UBERON:0000076,3.79e-15,8;UBERON:0000019,2.10e-13,20;UBERON:0000047,2.10e-13,20;UBERON:0010312,2.10e-13,20;UBERON:0004088,2.10e-13,20;UBERON:0010230,2.10e-13,20;UBERON:0003072,2.10e-13,20;UBERON:0004128,2.10e-13,20;UBERON:0003071,2.10e-13,20;UBERON:0000970,8.39e-13,21;UBERON:0002104,8.39e-13,21;UBERON:0003075,1.71e-12,82;UBERON:0007284,1.71e-12,82;UBERON:0001456,2.96e-12,22;UBERON:0002346,6.27e-12,86;UBERON:0003056,1.00e-11,61;UBERON:0000020,2.70e-11,24;UBERON:0001032,2.70e-11,24;UBERON:0004456,2.70e-11,24;UBERON:0001896,8.99e-11,3;UBERON:0005290,8.99e-11,3;UBERON:0010096,8.99e-11,3;UBERON:0001778,1.20e-10,3;UBERON:0001775,1.20e-10,3;UBERON:0010371,6.41e-10,104;UBERON:0005085,6.70e-09,31;UBERON:0002784,2.26e-08,4;UBERON:0000488,2.61e-08,4;UBERON:0010314,7.30e-08,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821246550437305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13441780596881,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,4.75314660397815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,1.87411556580271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,47.3910540939592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@NRCAM | |||
}} |
Revision as of 18:47, 22 January 2014
Short description: | p13@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 0bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.65e-29 | 4 |
vertebrate lens cell | 3.65e-29 | 4 |
lens epithelial cell | 3.65e-29 | 4 |
ciliated cell | 1.20e-10 | 3 |
ciliated epithelial cell | 1.20e-10 | 3 |
multi-ciliated epithelial cell | 1.20e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.20e-10 | 3 |
columnar/cuboidal epithelial cell | 4.06e-10 | 27 |