FFCP PHASE1:Hg19::chr7:93551089..93551142,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |||
|association_with_transcript=73bp_to_NM_004126,uc003und.2_5end | |||
|coexpression_cluster_id=C2004 | |||
|description=CAGE_peak_2_at_GNG11_5end | |||
|id=chr7:93551089..93551142,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.12e-33!180;CL:0000222!5.55e-30!119;CL:0000183!1.50e-22!59;CL:0000680!1.99e-22!57;CL:0000056!1.99e-22!57;CL:0000355!1.99e-22!57;CL:0000187!1.88e-21!54;CL:0000192!2.82e-19!42;CL:0000514!2.82e-19!42;CL:0000393!9.99e-18!60;CL:0000211!9.99e-18!60;CL:0000057!2.52e-16!75;CL:0000359!9.02e-16!32;CL:0002139!1.71e-15!24;CL:0000115!1.69e-14!35;CL:0002078!2.84e-13!44;CL:0000071!6.91e-12!18;CL:0002546!6.91e-12!18;CL:0000220!3.25e-11!246;CL:0002321!9.36e-11!248;CL:0000213!4.00e-09!57;CL:0000215!4.00e-09!57;CL:0002494!3.19e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.00e-16;24!CL:0000359;2.64e-15;32!CL:0000192;7.60e-14;43!CL:0000115;2.81e-13;36!CL:0000071;4.29e-12;18!CL:0000187;5.20e-12;55!CL:0002078;3.13e-09;45!CL:0000393;4.90e-09;61!CL:0000211;4.90e-09;61!CL:0000057;2.02e-07;73!CL:0002494;2.53e-07;16!CL:1000413;9.76e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.82e-30,121;CL:0000680,1.61e-22,58;CL:0000056,1.61e-22,58;CL:0000355,1.61e-22,58;CL:0000187,1.60e-21,55;CL:0000192,2.98e-19,43;CL:0000514,2.98e-19,43;CL:0000393,2.07e-17,61;CL:0000211,2.07e-17,61;CL:0000057,6.58e-17,76;CL:0000359,4.78e-16,32;CL:0002139,9.15e-16,24;CL:0000115,1.10e-15,36;CL:0002078,5.70e-14,45;CL:0000071,4.35e-12,18;CL:0002546,4.35e-12,18;CL:0002321,1.61e-10,250;CL:0000213,1.49e-09,58;CL:0000215,1.49e-09,58;CL:0002494,2.47e-07,16;CL:1000413,9.77e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;7.60e-14;43!CL:0002546;4.29e-12;18!CL:0000355;7.29e-12;58!CL:0000222;8.61e-09;121 | |||
|ontology_enrichment_disease=DOID:2394!2.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.74e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.74e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001009!2.04e-36!113;UBERON:0004535!3.18e-36!110;UBERON:0002049!8.40e-34!79;UBERON:0007798!8.40e-34!79;UBERON:0000055!2.13e-31!69;UBERON:0004872!2.72e-30!84;UBERON:0001981!6.52e-28!60;UBERON:0007500!6.52e-28!60;UBERON:0004537!6.52e-28!60;UBERON:0006965!6.52e-28!60;UBERON:0003914!2.08e-27!118;UBERON:0000914!2.66e-24!83;UBERON:0002329!2.66e-24!83;UBERON:0003077!2.66e-24!83;UBERON:0003059!2.66e-24!83;UBERON:0007282!2.66e-24!83;UBERON:0009618!2.66e-24!83;UBERON:0007285!2.66e-24!83;UBERON:0004290!1.22e-23!70;UBERON:0005256!8.11e-23!143;UBERON:0001134!6.25e-22!61;UBERON:0002036!6.25e-22!61;UBERON:0003082!6.25e-22!61;UBERON:0002385!9.21e-22!63;UBERON:0001015!9.21e-22!63;UBERON:0000383!9.21e-22!63;UBERON:0000477!2.14e-21!286;UBERON:0000490!3.12e-21!138;UBERON:0001637!3.23e-21!42;UBERON:0003509!3.23e-21!42;UBERON:0004572!3.23e-21!42;UBERON:0000486!1.98e-19!82;UBERON:0002100!7.56e-18!216;UBERON:0000119!1.27e-17!312;UBERON:0000483!4.40e-17!309;UBERON:0000468!1.23e-16!659;UBERON:0004573!2.09e-16!33;UBERON:0004571!2.09e-16!33;UBERON:0004111!2.33e-16!241;UBERON:0000481!8.01e-16!347;UBERON:0000475!1.34e-15!365;UBERON:0000467!1.50e-15!625;UBERON:0003104!3.13e-15!238;UBERON:0009142!3.13e-15!238;UBERON:0000480!3.16e-15!626;UBERON:0000025!1.35e-12!194;UBERON:0000926!1.53e-12!448;UBERON:0004120!1.53e-12!448;UBERON:0006603!1.53e-12!448;UBERON:0001986!6.91e-12!18;UBERON:0004638!6.91e-12!18;UBERON:0004852!6.91e-12!18;UBERON:0000487!2.18e-11!22;UBERON:0006914!1.09e-10!25;UBERON:0000947!3.69e-10!21;UBERON:0010191!3.69e-10!21;UBERON:0002050!1.23e-09!605;UBERON:0005423!1.23e-09!605;UBERON:0000923!1.69e-09!604;UBERON:0005291!1.69e-09!604;UBERON:0006598!1.69e-09!604;UBERON:0002532!1.69e-09!604;UBERON:0003103!2.42e-09!69;UBERON:0000922!3.47e-09!612;UBERON:0007100!1.78e-08!27;UBERON:0000948!2.26e-08!24;UBERON:0005498!2.26e-08!24;UBERON:0004140!2.26e-08!24;UBERON:0009881!2.26e-08!24;UBERON:0004141!2.26e-08!24;UBERON:0003084!2.26e-08!24;UBERON:0007005!2.26e-08!24;UBERON:0004139!2.26e-08!24;UBERON:0004291!2.26e-08!24;UBERON:0001135!3.80e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.17e-15;42!UBERON:0003509;1.17e-15;42!UBERON:0004572;1.17e-15;42!UBERON:0000055;2.33e-15;65!UBERON:0004573;2.62e-15;33!UBERON:0004571;2.62e-15;33!UBERON:0007500;2.90e-15;56!UBERON:0001981;2.90e-15;56!UBERON:0004537;2.90e-15;56!UBERON:0002049;9.90e-14;75!UBERON:0007798;9.90e-14;75!UBERON:0003914;1.52e-13;74!UBERON:0004638;4.29e-12;18!UBERON:0001986;4.29e-12;18!UBERON:0004852;4.29e-12;18!UBERON:0000487;1.07e-11;22!UBERON:0006914;4.44e-11;25!UBERON:0004535;1.35e-10;109!UBERON:0000947;2.50e-10;21!UBERON:0010191;2.50e-10;21!UBERON:0001009;4.04e-10;112!UBERON:0002385;5.52e-09;31!UBERON:0001015;5.52e-09;31!UBERON:0000383;5.52e-09;31!UBERON:0000025;1.12e-07;93!UBERON:0007100;1.37e-07;25!UBERON:0000948;1.86e-07;22!UBERON:0000490;2.26e-07;33!UBERON:0001135;2.98e-07;15!UBERON:0003915;9.76e-07;9!UBERON:0004700;9.76e-07;9!UBERON:0001917;9.76e-07;9 | |||
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| |||
|short_description=p2@GNG11 | |||
}} |
Revision as of 17:54, 22 January 2014
Short description: | p2@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNG11_5end |
Coexpression cluster: | C2004_Endothelial_mesenchymal_Renal_Smooth_Hepatic_leiomyoma_Preadipocyte |
Association with transcript: | 73bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.82e-30 | 121 |
muscle precursor cell | 1.61e-22 | 58 |
myoblast | 1.61e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.61e-22 | 58 |
muscle cell | 1.60e-21 | 55 |
smooth muscle cell | 2.98e-19 | 43 |
smooth muscle myoblast | 2.98e-19 | 43 |
electrically responsive cell | 2.07e-17 | 61 |
electrically active cell | 2.07e-17 | 61 |
fibroblast | 6.58e-17 | 76 |
vascular associated smooth muscle cell | 4.78e-16 | 32 |
endothelial cell of vascular tree | 9.15e-16 | 24 |
endothelial cell | 1.10e-15 | 36 |
meso-epithelial cell | 5.70e-14 | 45 |
blood vessel endothelial cell | 4.35e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.35e-12 | 18 |
embryonic cell | 1.61e-10 | 250 |
lining cell | 1.49e-09 | 58 |
barrier cell | 1.49e-09 | 58 |
cardiocyte | 2.47e-07 | 16 |
endothelial cell of artery | 9.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.74e-07 | 14 |