FFCP PHASE1:Hg19::chr7:45953215..45953229,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45953215..45953229,- | |||
|id=chr7:45953215..45953229,- | |||
|ontology_enrichment_celltype=CL:0000057!8.72e-10!75;CL:0000055!1.10e-09!180;CL:0002620!1.80e-09!23;CL:0000153!1.17e-07!9;CL:0000447!1.17e-07!9;CL:0002334!1.32e-07!12;CL:0002595!5.82e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.04e-20;9!CL:0000447;2.04e-20;9!CL:0000138;1.63e-16;6!CL:0000327;4.21e-15;15!CL:0002620;3.51e-14;23!CL:0000499;5.25e-14;28!CL:0002595;6.46e-12;5!CL:0000135;1.34e-11;3!CL:0000388;1.34e-11;3!CL:0002589;4.30e-08;2!CL:0000359;4.56e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.81e-20,9;CL:0000447,1.81e-20,9;CL:0000058,1.47e-16,6;CL:0000138,1.47e-16,6;CL:0000327,4.49e-15,15;CL:0002620,5.38e-14,23;CL:0000499,5.61e-14,28;CL:0000057,3.15e-12,76;CL:0002595,1.10e-11,5;CL:0000135,1.42e-11,3;CL:0000388,1.42e-11,3;CL:0002589,3.48e-08,2;CL:0000359,2.10e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.44e-07!5;DOID:450!4.44e-07!5;DOID:66!4.44e-07!5;DOID:423!4.44e-07!5;DOID:0080000!4.44e-07!5;DOID:11722!4.44e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.69e-12;5!DOID:450;5.69e-12;5!DOID:66;5.69e-12;5!DOID:423;5.69e-12;5!DOID:0080000;5.69e-12;5!DOID:11722;5.69e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.00e-12,5;DOID:450,9.00e-12,5;DOID:66,9.00e-12,5;DOID:423,9.00e-12,5;DOID:0080000,9.00e-12,5;DOID:11722,9.00e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0003834!5.82e-07!5;UBERON:0001533!5.82e-07!5;UBERON:0003688!6.91e-07!6;UBERON:0002358!6.91e-07!6;UBERON:0003684!6.91e-07!6;UBERON:0001178!6.91e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;6.46e-12;5!UBERON:0001533;6.46e-12;5!UBERON:0007846;1.34e-11;3!UBERON:0000043;1.34e-11;3!UBERON:0007845;1.34e-11;3!UBERON:0002097;5.50e-09;41!UBERON:0003513;1.61e-08;7!UBERON:0001529;4.30e-08;2!UBERON:0007204;4.30e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.10e-11,5;UBERON:0001533,1.10e-11,5;UBERON:0007846,1.42e-11,3;UBERON:0000043,1.42e-11,3;UBERON:0007845,1.42e-11,3;UBERON:0002097,2.83e-10,41;UBERON:0002199,7.04e-09,46;UBERON:0002416,7.04e-09,46;UBERON:0003513,2.32e-08,7;UBERON:0001529,3.48e-08,2;UBERON:0007204,3.48e-08,2 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,12.2889311810753,12.0321098552613,15.9331170856906,3.9764297352555,12.1658717575659,0,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0.354668382198357,1.12135520028461,0,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.919463387397059,0.150238058906597,0,2.51145489964407,0.640672166455702,2.11931901159562,3.60109315301283,1.03052529238439,2.57640540045629,0.37223371266318,0.843881661206331,1.07180705677318,4.79624171063818,3.40584624976508,0.323292113637624,8.52023022039874,2.31729825923573,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,3.44585807502342,0,0.868687840005475,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,1.96271887676878,0.157702415033935,1.17141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0.306923946576125,1.12264037773229,0.512556597022804,1.02341449813341,0.321707842287215,2.96836132889982,0,0.532685175939381,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,1.29726953372744,2.86249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,3.17020642346017,0,0,0.487426979262569,1.05650146756755,0,0,1.13008116620243,1.10273068709225,3.3171948762061,5.26141062304515,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,2.32218398827431,2.96365403663912,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0.95497793895076,0.890894042497916,0.614321404198464,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,4.97663340258892,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,1.5950057986596,0,3.19820865611181,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0,0.343972064943233,0.19351266257817,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,1.9980960958213,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0.25426853765475,1.62899880526114,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0.568209015825267,0.50313580350515,1.77962244319307,0,0.604923695052956,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.300515217994437,0.761610424337591,0.406870733204662,0,0,0,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0.453411851024545,0,0,1.4327107286519,1.54400723580486,0,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0.352675943690684,0.918736432059601,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0.863710364874486,7.16627531830575,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,1.86919826156599,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,1.11598505450025,3.69740502905135,2.59575937274273,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.186224142887574,0,0,0,0,0.342233301085281,0,0.143444410785353,1.33064142618405,0,0,0,0.179650404213174,2.34640942403454,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr7:45953215..45953229,- | |||
}} |
Revision as of 16:55, 22 January 2014
Short description: | p@chr7:45953215..45953229, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr7:45953215..45953229, - |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.81e-20 | 9 |
carbohydrate secreting cell | 1.81e-20 | 9 |
chondroblast | 1.47e-16 | 6 |
chondrocyte | 1.47e-16 | 6 |
extracellular matrix secreting cell | 4.49e-15 | 15 |
skin fibroblast | 5.38e-14 | 23 |
stromal cell | 5.61e-14 | 28 |
fibroblast | 3.15e-12 | 76 |
smooth muscle cell of the subclavian artery | 1.10e-11 | 5 |
fibrocyte | 1.42e-11 | 3 |
tendon cell | 1.42e-11 | 3 |
smooth muscle cell of the brachiocephalic vasculature | 3.48e-08 | 2 |
vascular associated smooth muscle cell | 2.10e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.10e-11 | 5 |
subclavian artery | 1.10e-11 | 5 |
dense regular connective tissue | 1.42e-11 | 3 |
tendon | 1.42e-11 | 3 |
regular connective tissue | 1.42e-11 | 3 |
skin of body | 2.83e-10 | 41 |
integument | 7.04e-09 | 46 |
integumental system | 7.04e-09 | 46 |
trunk blood vessel | 2.32e-08 | 7 |
brachiocephalic artery | 3.48e-08 | 2 |
brachiocephalic vasculature | 3.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.00e-12 | 5 |
myotonic disease | 9.00e-12 | 5 |
muscle tissue disease | 9.00e-12 | 5 |
myopathy | 9.00e-12 | 5 |
muscular disease | 9.00e-12 | 5 |
myotonic dystrophy | 9.00e-12 | 5 |