FFCP PHASE1:Hg19::chr7:29152444..29152447,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14399 | |||
|TSSclassifier=weak | |||
|UniProt=C9JLV0 | |||
|association_with_transcript=89bp_to_ENST00000448959_5end | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_18_at_CPVL_5end | |||
|id=chr7:29152444..29152447,- | |||
|ontology_enrichment_celltype=CL:0002541!1.11e-34!3;CL:0000039!1.99e-25!7;CL:0000586!1.99e-25!7;CL:0002537!1.63e-20!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.52e-87;3!CL:0000349;5.66e-15;19!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.52e-87,3;CL:0000349,5.66e-15,19;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!1.25e-12!1;DOID:10165!1.25e-12!1;DOID:1798!1.25e-12!1;DOID:178!3.08e-12!1;DOID:326!3.08e-12!1;DOID:3978!3.08e-12!1;DOID:3394!3.08e-12!1;DOID:5844!3.08e-12!1;DOID:3095!2.88e-08!22;DOID:2994!2.88e-08!22;DOID:114!9.54e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.71e-38!14;UBERON:0000158!2.71e-38!14;UBERON:0000476!1.11e-34!3;UBERON:0000920!1.11e-34!3;UBERON:0003124!6.32e-26!7;UBERON:0000478!3.96e-22!24;UBERON:0000305!7.73e-15!7;UBERON:0004871!4.65e-13!8;UBERON:0004923!5.88e-09!57;UBERON:0000341!9.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.52e-87;3!UBERON:0000920;1.52e-87;3!UBERON:0005631;2.72e-27;10!UBERON:0000158;2.72e-27;10!UBERON:0000478;4.20e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.52e-87,3;UBERON:0003124,2.18e-38,7;UBERON:0005631,7.13e-20,14;UBERON:0000158,7.13e-20,14;UBERON:0000478,4.20e-12,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,3.25942115766024,1.27600463892768,0.549585560411174,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@CPVL | |||
}} |
Revision as of 16:17, 22 January 2014
Short description: | p18@CPVL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CPVL_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 89bp_to_ENST00000448959_5end |
EntrezGene: | CPVL |
HGNC: | 14399 |
UniProt: | C9JLV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.52e-87 | 3 |
extraembryonic cell | 5.66e-15 | 19 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.52e-87 | 3 |
chorion | 2.18e-38 | 7 |
extraembryonic membrane | 7.13e-20 | 14 |
membranous layer | 7.13e-20 | 14 |
extraembryonic structure | 4.20e-12 | 24 |