FFCP PHASE1:Hg19::chr7:26400526..26400548,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14974 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_uc010kuv.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_SNX10_5end | |||
|id=chr7:26400526..26400548,+ | |||
|ontology_enrichment_celltype=CL:0002009!4.75e-79!65;CL:0002194!1.42e-76!63;CL:0000576!1.42e-76!63;CL:0000040!1.42e-76!63;CL:0000559!1.42e-76!63;CL:0000766!2.75e-73!76;CL:0000557!8.60e-71!71;CL:0002057!3.10e-68!42;CL:0000839!4.22e-67!70;CL:0000860!1.14e-62!45;CL:0000738!1.16e-55!140;CL:0002087!2.32e-50!119;CL:0000763!3.22e-48!112;CL:0000049!3.22e-48!112;CL:0002031!1.47e-45!124;CL:0000037!2.75e-42!172;CL:0000566!2.75e-42!172;CL:0000988!1.14e-38!182;CL:0002032!1.08e-36!165;CL:0000837!1.08e-36!165;CL:0002393!2.15e-15!9;CL:0002397!2.15e-15!9;CL:0000134!3.34e-13!358;CL:0002320!1.61e-12!365;CL:0000219!3.78e-10!390;CL:0000451!5.65e-10!10;CL:0000840!4.43e-09!5;CL:0001029!4.43e-09!5;CL:0000048!1.05e-08!430;CL:0000034!1.11e-08!444;CL:0000723!2.72e-08!436;CL:0000990!1.51e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.11e-67;39!CL:0000234;2.11e-67;39!CL:0000860;6.80e-67;33!CL:0002057;6.80e-67;33!CL:0000576;1.23e-61;48!CL:0000766;1.95e-44;69!CL:0000763;1.94e-20;100!CL:0002087;1.99e-16;104!CL:0000235;2.28e-16;6!CL:0002393;2.44e-16;6!CL:0002397;2.44e-16;6!CL:0000738;1.54e-15;136!CL:0002619;4.81e-09;3!CL:0000767;9.16e-09;3!CL:0000875;1.96e-08;3!CL:0002396;1.96e-08;3!CL:0000988;4.19e-08;177!CL:0000226;8.58e-08;3!CL:0000842;8.58e-08;3!CL:0000784;9.47e-08;3!CL:0000219;1.52e-07;193!CL:0000451;2.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.46e-117,59;CL:0000576,2.46e-117,59;CL:0000040,2.46e-117,59;CL:0000559,2.46e-117,59;CL:0002009,4.31e-113,61;CL:0000473,2.30e-112,48;CL:0000234,2.30e-112,48;CL:0000766,7.92e-110,72;CL:0000839,1.37e-103,66;CL:0000557,7.41e-102,67;CL:0000860,1.17e-96,42;CL:0002057,1.17e-96,42;CL:0000763,1.17e-68,108;CL:0000049,1.17e-68,108;CL:0000738,2.12e-64,136;CL:0002087,5.28e-63,115;CL:0002031,4.20e-53,120;CL:0000037,2.90e-49,168;CL:0000988,5.48e-46,177;CL:0002032,5.10e-43,161;CL:0000837,5.10e-43,161;CL:0002393,4.35e-23,9;CL:0002397,4.35e-23,9;CL:0000134,7.87e-18,354;CL:0002320,3.51e-17,361;CL:0000235,2.34e-16,6;CL:0000219,6.73e-15,386;CL:0000048,7.84e-13,427;CL:0000034,1.17e-12,441;CL:0000723,1.95e-12,433;CL:0002619,4.75e-09,3;CL:0000767,9.29e-09,3;CL:0000875,1.99e-08,3;CL:0002396,1.99e-08,3;CL:0000784,9.36e-08,3;CL:0000226,9.59e-08,3;CL:0000842,9.59e-08,3;CL:0000451,2.80e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-68;42!CL:0000049;1.28e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.17e-63!80;UBERON:0002390!2.34e-60!102;UBERON:0003061!2.34e-60!102;UBERON:0001474!2.75e-57!86;UBERON:0002193!1.03e-54!112;UBERON:0002405!5.57e-51!115;UBERON:0004765!1.43e-47!101;UBERON:0001434!1.43e-47!101;UBERON:0002204!2.99e-24!167;UBERON:0003081!7.84e-23!216;UBERON:0002384!3.44e-12!375;UBERON:0000926!1.99e-08!448;UBERON:0004120!1.99e-08!448;UBERON:0006603!1.99e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.75e-88,76;UBERON:0001474,7.08e-81,82;UBERON:0002390,1.62e-76,98;UBERON:0003061,1.62e-76,98;UBERON:0002405,1.25e-72,93;UBERON:0004765,1.62e-72,90;UBERON:0002193,3.86e-68,108;UBERON:0001434,6.25e-64,100;UBERON:0002204,2.25e-34,167;UBERON:0003081,6.16e-31,203;UBERON:0002384,3.80e-17,371;UBERON:0000926,1.20e-15,315;UBERON:0004120,1.20e-15,315;UBERON:0006603,1.20e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39557661096953,0,0,0,0,0,0,0,0,0,0,0,0,9.8341069212226,25.7165696725133,12.3852898652861,0,0,0,0,0,0.880801318004542,70.9114122920803,47.1279451554833,31.9005979952302,28.6611807027103,27.5309616116133,23.6969522223452,1.74477886535478,1.88937971844405,2.66842467306598,30.9130619084561,31.2487594896588,66.2771633715522,58.9769404260408,48.9266949470582,131.011155358276,59.9857484481716,80.6855854479783,117.821043337077,8.84738995850242,7.09555990150399,27.4162651023003,43.7699966090391,38.8324122762073,42.8355874285358,11.8746468067218,8.37747362010854,10.6556187633174,167.740939927322,136.172453925874,135.775250281035,12.8136819280939,26.5956288394303,40.3971251151517,137.425687097775,240.117018663892,331.019657263165,6.12640330304631,20.8352213965743,10.9022495664355,0.561643155732475,1.20141514273205,0.48217676009124,6.27028036230747,8.15558376516269,10.2291926108195,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,14.0127140745384,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.61958150995425,0,0,1.9472843619281,1.21890816109487,5.85015026283007,2.38490624305342,2.28797964312051,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.204926474817,135.488469515619,36.2660035984497,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,10.0451418286425,29.5167515276244,0,0,0,0,0,0,0,0.788123040807709,0,0.77005821767849,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.15714200818617,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6368455241475,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,7.17890078432281,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,1.91400695839152,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,6.00272506470636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0,0,0,10.0380167813633,0.157204305099666,4.14239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.620916591138472,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,4.88716373495239,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452122368852043,0.124149428591716,0,0.12729431655633,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SNX10 | |||
}} |
Revision as of 16:09, 22 January 2014
Short description: | p4@SNX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNX10_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -6bp_to_uc010kuv.2_5end |
EntrezGene: | SNX10 |
HGNC: | 14974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.75e-88 | 76 |
bone element | 7.08e-81 | 82 |
hematopoietic system | 1.62e-76 | 98 |
blood island | 1.62e-76 | 98 |
immune system | 1.25e-72 | 93 |
skeletal element | 1.62e-72 | 90 |
hemolymphoid system | 3.86e-68 | 108 |
skeletal system | 6.25e-64 | 100 |
musculoskeletal system | 2.25e-34 | 167 |
lateral plate mesoderm | 6.16e-31 | 203 |
connective tissue | 3.80e-17 | 371 |
mesoderm | 1.20e-15 | 315 |
mesoderm-derived structure | 1.20e-15 | 315 |
presumptive mesoderm | 1.20e-15 | 315 |