FFCP PHASE1:Hg19::chr7:23749832..23749845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11407 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXU1 | |||
|association_with_transcript=0bp_to_NM_001122833,NM_031414,uc003sws.3,uc003swt.3,uc011jze.1_5end | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_2_at_STK31_5end | |||
|id=chr7:23749832..23749845,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.45e-17!4;CL:0002253!1.12e-09!2;CL:1000415!1.22e-09!2;CL:0002251!1.07e-07!21;CL:0002231!6.88e-07!3;CL:0002178!9.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;6.79e-23;4!CL:0002253;2.19e-12;2!CL:1000415;2.59e-12;2!CL:0002251;1.63e-10;20!CL:0002231;1.08e-08;3!CL:0002178;1.51e-08;3!CL:0002076;1.14e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.18e-23,4;CL:0002253,2.32e-12,2;CL:1000415,2.59e-12,2;CL:0002251,1.65e-10,20;CL:0002076,9.42e-09,42;CL:0002231,1.04e-08,3;CL:0002178,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.82e-21;10!UBERON:0005564;9.82e-21;10 | |||
|ontology_enrichment_disease=DOID:3119!3.36e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.34e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.29e-19!8;UBERON:0001242!1.45e-17!4;UBERON:0001262!1.45e-17!4;UBERON:0004786!1.45e-17!4;UBERON:0004808!1.45e-17!4;UBERON:0001277!1.45e-17!4;UBERON:0003112!1.70e-17!1;UBERON:0000032!1.70e-17!1;UBERON:0005253!1.70e-17!1;UBERON:0003128!1.70e-17!1;UBERON:0002241!1.70e-17!1;UBERON:0001703!1.70e-17!1;UBERON:0004761!1.70e-17!1;UBERON:0009617!1.70e-17!1;UBERON:0003135!1.87e-14!11;UBERON:0003350!2.95e-14!5;UBERON:0003101!1.38e-12!22;UBERON:0000079!1.38e-12!22;UBERON:0000485!2.46e-08!9;UBERON:0000991!7.53e-08!21;UBERON:0009196!7.53e-08!21;UBERON:0009117!7.53e-08!21;UBERON:0005564!7.53e-08!21;UBERON:0004176!1.62e-07!22;UBERON:0002110!7.70e-07!3;UBERON:0006242!7.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.03e-25;8!UBERON:0001242;6.79e-23;4!UBERON:0001262;6.79e-23;4!UBERON:0004786;6.79e-23;4!UBERON:0004808;6.79e-23;4!UBERON:0001277;6.79e-23;4!UBERON:0003135;6.40e-19;11!UBERON:0003101;1.36e-16;22!UBERON:0000079;1.36e-16;22!UBERON:0000485;1.54e-13;7!UBERON:0003929;1.54e-13;7!UBERON:0003350;5.67e-12;8!UBERON:0000991;3.05e-10;21!UBERON:0005409;3.16e-09;22!UBERON:0002110;1.21e-08;3!UBERON:0001052;7.91e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.03e-25,8;UBERON:0001242,7.18e-23,4;UBERON:0001262,7.18e-23,4;UBERON:0004786,7.18e-23,4;UBERON:0004808,7.18e-23,4;UBERON:0001277,7.18e-23,4;UBERON:0003135,6.40e-19,11;UBERON:0003101,1.33e-16,22;UBERON:0000079,1.33e-16,22;UBERON:0003350,5.83e-12,8;UBERON:0000485,9.69e-11,9;UBERON:0000991,3.05e-10,21;UBERON:0009196,3.05e-10,21;UBERON:0009117,3.05e-10,21;UBERON:0005564,3.05e-10,21;UBERON:0004176,8.34e-10,22;UBERON:0002110,1.21e-08,3;UBERON:0006242,1.21e-08,3;UBERON:0005409,3.16e-08,25;UBERON:0002323,3.98e-08,46;UBERON:0004458,1.20e-07,49;UBERON:0003886,5.73e-07,54;UBERON:0003929,6.72e-07,54;UBERON:0001052,8.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28850285735388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9982099128376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7428334289795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.19091498853574,0,0,1.39866726707491,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8115559184366,12.1245917149183,11.7904217268719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p2@STK31 | |||
}} |
Revision as of 16:04, 22 January 2014
Short description: | p2@STK31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STK31_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 0bp_to_NM_001122833, NM_031414, uc003sws.3, uc003swt.3, uc011jze.1_5end |
EntrezGene: | STK31 |
HGNC: | 11407 |
UniProt: | Q9BXU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.18e-23 | 4 |
epithelial cell of large intestine | 2.32e-12 | 2 |
epithelial cell of gall bladder | 2.59e-12 | 2 |
epithelial cell of alimentary canal | 1.65e-10 | 20 |
endo-epithelial cell | 9.42e-09 | 42 |
epithelial cell of prostate | 1.04e-08 | 3 |
epithelial cell of stomach | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.03e-25 | 8 |
intestinal mucosa | 7.18e-23 | 4 |
wall of intestine | 7.18e-23 | 4 |
gastrointestinal system mucosa | 7.18e-23 | 4 |
gastrointestinal system epithelium | 7.18e-23 | 4 |
intestinal epithelium | 7.18e-23 | 4 |
male reproductive organ | 6.40e-19 | 11 |
male organism | 1.33e-16 | 22 |
male reproductive system | 1.33e-16 | 22 |
epithelium of mucosa | 5.83e-12 | 8 |
simple columnar epithelium | 9.69e-11 | 9 |
gonad | 3.05e-10 | 21 |
indifferent external genitalia | 3.05e-10 | 21 |
indifferent gonad | 3.05e-10 | 21 |
gonad primordium | 3.05e-10 | 21 |
external genitalia | 8.34e-10 | 22 |
gallbladder | 1.21e-08 | 3 |
gall bladder primordium | 1.21e-08 | 3 |
gastrointestinal system | 3.16e-08 | 25 |
body cavity | 3.98e-08 | 46 |
body cavity or lining | 1.20e-07 | 49 |
body cavity precursor | 5.73e-07 | 54 |
gut epithelium | 6.72e-07 | 54 |
rectum | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.34e-07 | 14 |