FFCP PHASE1:Hg19::chr7:16840970..16841011,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10551 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=328 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-150bp_to_ENST00000450569_5end | |||
|coexpression_cluster_id=C4669 | |||
|description=CAGE_peak_2_at_AGR2_5end | |||
|id=chr7:16840970..16841011,- | |||
|ontology_enrichment_celltype=CL:0000223!5.63e-10!59;CL:0002076!8.60e-10!43;CL:0000066!2.03e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002536;2.30e-10;2!CL:0002368;7.46e-09;13!CL:0002076;7.76e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.17e-11,42;CL:0000223,4.27e-11,58;CL:0002536,2.47e-10,2;CL:0002368,8.50e-09,13 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.87e-11;2 | |||
|ontology_enrichment_disease=DOID:305!1.10e-13!106;DOID:0050687!1.73e-08!143;DOID:299!4.16e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.56e-11;4!DOID:1612;2.56e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.12e-11,4;DOID:1612,3.12e-11,4;DOID:305,6.71e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.59e-26!169;UBERON:0000925!5.59e-26!169;UBERON:0006595!5.59e-26!169;UBERON:0001007!1.11e-24!155;UBERON:0001555!1.11e-24!155;UBERON:0007026!1.11e-24!155;UBERON:0004921!3.87e-23!129;UBERON:0004185!3.87e-23!129;UBERON:0000077!9.85e-18!130;UBERON:0005911!1.79e-13!82;UBERON:0000065!2.03e-11!53;UBERON:0001041!2.27e-11!98;UBERON:0005409!4.46e-11!35;UBERON:0005153!5.53e-10!37;UBERON:0005178!6.17e-10!34;UBERON:0002224!6.17e-10!34;UBERON:0001004!9.08e-10!72;UBERON:0002294!9.31e-10!7;UBERON:0001173!9.31e-10!7;UBERON:0004912!9.31e-10!7;UBERON:0000160!1.36e-09!27;UBERON:0005181!1.52e-09!35;UBERON:0000344!1.80e-09!12;UBERON:0002048!6.83e-09!22;UBERON:0000117!6.83e-09!22;UBERON:0000171!6.83e-09!22;UBERON:0000170!6.83e-09!22;UBERON:0005597!6.83e-09!22;UBERON:0000118!6.83e-09!22;UBERON:0008947!1.68e-08!38;UBERON:0003258!1.68e-08!38;UBERON:0000466!1.95e-08!126;UBERON:0000915!2.57e-08!52;UBERON:0006947!7.94e-08!3;UBERON:0004054!7.94e-08!3;UBERON:0000072!1.89e-07!46;UBERON:0005177!2.27e-07!107;UBERON:0000305!2.36e-07!7;UBERON:0000481!5.32e-07!347;UBERON:0000464!6.32e-07!104;UBERON:0003104!6.86e-07!238;UBERON:0009142!6.86e-07!238;UBERON:0001046!9.42e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.65e-15;3!UBERON:0004054;1.65e-15;3!UBERON:0005409;1.43e-12;22!UBERON:0000058;5.99e-12;10!UBERON:0005904;9.35e-12;4!UBERON:0003127;4.95e-11;2!UBERON:0000160;3.22e-09;17!UBERON:0004921;1.72e-08;33!UBERON:0007196;7.67e-08;15!UBERON:0001558;7.67e-08;15!UBERON:0003135;2.41e-07;11!UBERON:0003126;8.86e-07;7!UBERON:0001005;8.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.14e-15,3;UBERON:0004054,1.14e-15,3;UBERON:0004921,4.74e-13,118;UBERON:0004119,5.35e-13,160;UBERON:0000925,5.35e-13,160;UBERON:0006595,5.35e-13,160;UBERON:0001007,3.41e-12,145;UBERON:0001555,3.41e-12,145;UBERON:0007026,3.41e-12,145;UBERON:0005904,7.12e-12,4;UBERON:0003127,4.96e-11,2;UBERON:0005409,5.31e-11,25;UBERON:0000160,3.01e-09,17;UBERON:0007196,9.32e-08,15;UBERON:0001558,9.32e-08,15;UBERON:0003135,2.13e-07,11;UBERON:0000915,2.41e-07,52;UBERON:0000065,5.11e-07,54;UBERON:0003126,9.80e-07,7;UBERON:0001005,9.80e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,2.37390280405608,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,3.93563003337963,0,0,1.1240175325762,0,0.370353780634118,0,0,0,0,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80125358039787,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0,0,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3397729600055,0,0,0,0,0.47748896947538,1.48482340416319,0.307160702099232,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0,0.0898683511473268,2.86433879480975,0,0.394573622547734,0,0,0,0,0,0,1.04951999995435,0,1.593108275997,1.01701460117107,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,2.98578579323551,0.884575645033392,5.49927130440263,0,0,0,0,0,0,0,0.19566461893209,0,7.49710365413842,6.04953580243319,0,0,0,0,0,0,0,0,0,0,15.4468167118267,0,0,1.7472666824203,0,0.0967563312890851,0,0,0,0,0.451961481561065,0,0,0,0.782205530939212,0.0801588202515337,4.26905989478705,0,14.8413129668729,0,0.343189995723929,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15144807199414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84347351537318,0.704815022316672,0.427149650270779,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,1.28400018965175,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.295712172434091,0,0,0,0,0,0,3.47347824872506,0,1.40538670403555,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.889851215136553,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,9.31451510420044,0,0,0,0,0.687051635306701,1.46301509978723,0,0,0,0,0,0,0,0.11294608203896,0,0,0.463044948647668,2.40415516554353,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.240724100067505,12.4157186001908,0,0,0,0,0,12.1676173318542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,2.17716747896961,0.342233301085281,0.673520530145875,4.30333232356058,5.32256570473621,0.651226148887796,0,0,0,7.03922827210363,0,0,0,0,0 | |||
|short_description=p2@AGR2 | |||
}} |
Revision as of 15:48, 22 January 2014
Short description: | p2@AGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AGR2_5end |
Coexpression cluster: | C4669_adenocarcinoma_gastric_lung_stomach_endometrioid_trachea_Prostate |
Association with transcript: | -150bp_to_ENST00000450569_5end |
EntrezGene: | AGR2 |
HGNC: | 328 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.17e-11 | 42 |
endodermal cell | 4.27e-11 | 58 |
amniotic epithelial cell | 2.47e-10 | 2 |
respiratory epithelial cell | 8.50e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.14e-15 | 3 |
internal male genitalia | 1.14e-15 | 3 |
subdivision of digestive tract | 4.74e-13 | 118 |
endoderm-derived structure | 5.35e-13 | 160 |
endoderm | 5.35e-13 | 160 |
presumptive endoderm | 5.35e-13 | 160 |
digestive system | 3.41e-12 | 145 |
digestive tract | 3.41e-12 | 145 |
primitive gut | 3.41e-12 | 145 |
duct of male reproductive system | 7.12e-12 | 4 |
open tracheal system trachea | 4.96e-11 | 2 |
gastrointestinal system | 5.31e-11 | 25 |
intestine | 3.01e-09 | 17 |
tracheobronchial tree | 9.32e-08 | 15 |
lower respiratory tract | 9.32e-08 | 15 |
male reproductive organ | 2.13e-07 | 11 |
thoracic segment of trunk | 2.41e-07 | 52 |
respiratory tract | 5.11e-07 | 54 |
trachea | 9.80e-07 | 7 |
respiratory airway | 9.80e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.12e-11 | 4 |
breast cancer | 3.12e-11 | 4 |
carcinoma | 6.71e-07 | 106 |